RNA–Protein interactions for RNA: ENST00000580218.5

DHX40-208, Transcript of DEAH-box helicase 40, humanhuman

TSL 5

Gene DHX40, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-208ENST00000580218 RPS6KA4O75676 772 aa17.68■□□□□ 0.42
DHX40-208ENST00000580218 PHF14O94880 888 aa17.68■□□□□ 0.42
DHX40-208ENST00000580218 SLC16A10Q8TF71 515 aa17.68■□□□□ 0.42
DHX40-208ENST00000580218 SPON1Q9HCB6 807 aa17.68■□□□□ 0.42
DHX40-208ENST00000580218 CCDC87Q9NVE4 849 aa17.68■□□□□ 0.42
DHX40-208ENST00000580218 EIF4A1P60842 406 aaKnown RBP17.67■□□□□ 0.42
DHX40-208ENST00000580218 LMOD3Q0VAK6 560 aa17.67■□□□□ 0.42
DHX40-208ENST00000580218 ATF5Q9Y2D1 282 aaPredicted RBP17.67■□□□□ 0.42
DHX40-208ENST00000580218 NRXN2Q9P2S2 1712 aa17.67■□□□□ 0.42
DHX40-208ENST00000580218 COL15A1P39059 1388 aa17.66■□□□□ 0.42
DHX40-208ENST00000580218 CHL1O00533 1208 aa17.66■□□□□ 0.42
DHX40-208ENST00000580218 ZNF853P0CG23 659 aa17.66■□□□□ 0.42
DHX40-208ENST00000580218 USP16Q9Y5T5 823 aa17.66■□□□□ 0.42
DHX40-208ENST00000580218 GOLGB1Q14789 3259 aaKnown RBP17.66■□□□□ 0.42
DHX40-208ENST00000580218 SENP3-EIF4A1A0A087X0R7 540 aa17.65■□□□□ 0.42
DHX40-208ENST00000580218 FLAD1Q8NFF5 587 aa17.65■□□□□ 0.42
DHX40-208ENST00000580218 ARHGEF1Q92888 912 aaKnown RBP17.65■□□□□ 0.42
DHX40-208ENST00000580218 AFDNP55196 1824 aaKnown RBP17.64■□□□□ 0.41
DHX40-208ENST00000580218 GIGYF1O75420 1035 aaPredicted RBP17.64■□□□□ 0.41
DHX40-208ENST00000580218 HMGB2P26583 209 aaKnown RBP17.64■□□□□ 0.41
DHX40-208ENST00000580218 BABAM1Q9NWV8 329 aa17.64■□□□□ 0.41
DHX40-208ENST00000580218 RTCBQ9Y3I0 505 aaKnown RBP17.64■□□□□ 0.41
DHX40-208ENST00000580218 USP42Q9H9J4 1324 aaKnown RBP17.64■□□□□ 0.41
DHX40-208ENST00000580218 NBPF26B4DH59 902 aa17.63■□□□□ 0.41
DHX40-208ENST00000580218 CCER2I3L3R5 266 aa17.63■□□□□ 0.41
DHX40-208ENST00000580218 SNRPA1P09661 255 aaKnown RBP17.63■□□□□ 0.41
DHX40-208ENST00000580218 EIF5P55010 431 aaKnown RBP17.63■□□□□ 0.41
DHX40-208ENST00000580218 CCDC27Q2M243 656 aa17.63■□□□□ 0.41
DHX40-208ENST00000580218 KRT24Q2M2I5 525 aa17.63■□□□□ 0.41
DHX40-208ENST00000580218 NCBP3Q53F19 620 aaKnown RBP17.63■□□□□ 0.41
DHX40-208ENST00000580218 MSL1Q68DK7 614 aa17.63■□□□□ 0.41
DHX40-208ENST00000580218 NBPF10Q6P3W6 841 aaKnown RBP17.63■□□□□ 0.41
DHX40-208ENST00000580218 NBPF15Q8N660 670 aa17.63■□□□□ 0.41
DHX40-208ENST00000580218 A1BGP04217 495 aa17.62■□□□□ 0.41
DHX40-208ENST00000580218 GYS1P13807 737 aa17.62■□□□□ 0.41
DHX40-208ENST00000580218 DIEXFQ68CQ4 756 aaKnown RBP17.62■□□□□ 0.41
DHX40-208ENST00000580218 SRP68Q9UHB9 627 aaKnown RBP17.62■□□□□ 0.41
DHX40-208ENST00000580218 TSPYL4Q9UJ04 414 aa17.62■□□□□ 0.41
DHX40-208ENST00000580218 UTRNP46939 3433 aa17.61■□□□□ 0.41
DHX40-208ENST00000580218 PIP4K2AP48426 406 aaPredicted RBP17.61■□□□□ 0.41
DHX40-208ENST00000580218 WWC1Q8IX03 1113 aa17.61■□□□□ 0.41
DHX40-208ENST00000580218 FAM9BQ8IZU0 186 aa17.61■□□□□ 0.41
DHX40-208ENST00000580218 BCL2L12Q9HB09 334 aa17.61■□□□□ 0.41
DHX40-208ENST00000580218 TRAPPC3LQ5T215 181 aa17.6■□□□□ 0.41
DHX40-208ENST00000580218 LRP10Q7Z4F1 713 aa17.6■□□□□ 0.41
DHX40-208ENST00000580218 MIER1Q8N108 512 aa17.6■□□□□ 0.41
DHX40-208ENST00000580218 CFAP44Q96MT7 982 aa17.6■□□□□ 0.41
DHX40-208ENST00000580218 TEX13AQ9BXU3 409 aaPredicted RBP17.6■□□□□ 0.41
DHX40-208ENST00000580218 MBIPQ9NS73 344 aa17.6■□□□□ 0.41
DHX40-208ENST00000580218 ZNF521Q96K83 1311 aa17.6■□□□□ 0.41
DHX40-208ENST00000580218 STARD3NLO95772 234 aa17.59■□□□□ 0.41
DHX40-208ENST00000580218 CNKSR2Q8WXI2 1034 aa17.59■□□□□ 0.41
DHX40-208ENST00000580218 BRCA1P38398 1863 aaKnown RBP17.58■□□□□ 0.41
DHX40-208ENST00000580218 CANXP27824 592 aaKnown RBP17.58■□□□□ 0.4
DHX40-208ENST00000580218 IL6STP40189 918 aaPredicted RBP17.58■□□□□ 0.4
DHX40-208ENST00000580218 IFT57Q9NWB7 429 aa17.58■□□□□ 0.4
DHX40-208ENST00000580218 NUP98P52948 1817 aa17.58■□□□□ 0.4
DHX40-208ENST00000580218 C10orf71Q711Q0 1435 aa17.57■□□□□ 0.4
DHX40-208ENST00000580218 ANKRD31Q8N7Z5 1873 aa17.57■□□□□ 0.4
DHX40-208ENST00000580218 FKBP8Q14318 412 aa17.57■□□□□ 0.4
DHX40-208ENST00000580218 PDIA6Q15084 440 aa17.57■□□□□ 0.4
DHX40-208ENST00000580218 ANKRD36CQ5JPF3 1778 aa17.56■□□□□ 0.4
DHX40-208ENST00000580218 DDR1Q08345 913 aa17.56■□□□□ 0.4
DHX40-208ENST00000580218 ARXQ96QS3 562 aa17.56■□□□□ 0.4
DHX40-208ENST00000580218 SPINK5Q9NQ38 1064 aaPredicted RBP17.56■□□□□ 0.4
DHX40-208ENST00000580218 NARFQ9UHQ1 456 aa17.56■□□□□ 0.4
DHX40-208ENST00000580218 RFC4P35249 363 aa17.55■□□□□ 0.4
DHX40-208ENST00000580218 USPL1Q5W0Q7 1092 aa17.55■□□□□ 0.4
DHX40-208ENST00000580218 FHDC1Q9C0D6 1143 aaPredicted RBP17.55■□□□□ 0.4
DHX40-208ENST00000580218 DLEC1Q9Y238 1755 aa17.55■□□□□ 0.4
DHX40-208ENST00000580218 IL16Q14005 1332 aa17.54■□□□□ 0.4
DHX40-208ENST00000580218 N4BP2Q86UW6 1770 aaPredicted RBP17.54■□□□□ 0.4
DHX40-208ENST00000580218 CAMTA2O94983 1202 aa17.54■□□□□ 0.4
DHX40-208ENST00000580218 PROSER3Q2NL68 480 aa17.54■□□□□ 0.4
DHX40-208ENST00000580218 COL11A2P13942 1736 aaPredicted RBP17.54■□□□□ 0.4
DHX40-208ENST00000580218 MMP10P09238 476 aa17.53■□□□□ 0.4
DHX40-208ENST00000580218 TSR2Q969E8 191 aaKnown RBP17.53■□□□□ 0.4
DHX40-208ENST00000580218 ARFGEF2Q9Y6D5 1785 aa17.53■□□□□ 0.4
DHX40-208ENST00000580218 ERBB4Q15303 1308 aa17.52■□□□□ 0.4
DHX40-208ENST00000580218 TM4SF1P30408 202 aa17.52■□□□□ 0.4
DHX40-208ENST00000580218 GNAI1P63096 354 aa17.52■□□□□ 0.4
DHX40-208ENST00000580218 SYT17Q9BSW7 474 aa17.52■□□□□ 0.4
DHX40-208ENST00000580218 LAS1LQ9Y4W2 734 aaKnown RBP17.52■□□□□ 0.4
DHX40-208ENST00000580218 PXDNLA1KZ92 1463 aa17.51■□□□□ 0.39
DHX40-208ENST00000580218 HOXB7P09629 217 aa17.51■□□□□ 0.39
DHX40-208ENST00000580218 POLD1P28340 1107 aa17.51■□□□□ 0.39
DHX40-208ENST00000580218 NLGN1Q8N2Q7 840 aa17.51■□□□□ 0.39
DHX40-208ENST00000580218 C8orf58Q8NAV2 365 aa17.51■□□□□ 0.39
DHX40-208ENST00000580218 NLGN2Q8NFZ4 835 aa17.51■□□□□ 0.39
DHX40-208ENST00000580218 TBC1D2BQ9UPU7 963 aa17.51■□□□□ 0.39
DHX40-208ENST00000580218 FANCIQ9NVI1 1328 aa17.5■□□□□ 0.39
DHX40-208ENST00000580218 POLRMTO00411 1230 aaKnown RBP17.5■□□□□ 0.39
DHX40-208ENST00000580218 CALD1Q05682 793 aaKnown RBP17.5■□□□□ 0.39
DHX40-208ENST00000580218 NFIXQ14938 502 aa17.5■□□□□ 0.39
DHX40-208ENST00000580218 TSPYL6Q8N831 410 aa17.5■□□□□ 0.39
DHX40-208ENST00000580218 CARMIL3Q8ND23 1372 aa17.5■□□□□ 0.39
DHX40-208ENST00000580218 TNRC6CQ9HCJ0 1690 aaKnown RBP17.49■□□□□ 0.39
DHX40-208ENST00000580218 ANXA1P04083 346 aa17.49■□□□□ 0.39
DHX40-208ENST00000580218 DUSP27Q5VZP5 1158 aa17.49■□□□□ 0.39
DHX40-208ENST00000580218 TTLL7Q6ZT98 887 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms