RNA–Protein interactions for RNA: ENST00000579505.5

MSI2-210, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-210ENST00000579505 MYH16Q9H6N6 1097 aa23.21■■□□□ 1.31
MSI2-210ENST00000579505 C4AP0C0L4 1744 aa23.2■■□□□ 1.3
MSI2-210ENST00000579505 PRAMEF22A3QJZ6 481 aa23.2■■□□□ 1.3
MSI2-210ENST00000579505 PSDA5PKW4 1024 aaPredicted RBP23.2■■□□□ 1.3
MSI2-210ENST00000579505 INTS5Q6P9B9 1019 aaKnown RBP23.2■■□□□ 1.3
MSI2-210ENST00000579505 CCDC87Q9NVE4 849 aa23.2■■□□□ 1.3
MSI2-210ENST00000579505 PNPLA7Q6ZV29 1317 aa23.19■■□□□ 1.3
MSI2-210ENST00000579505 GNPATO15228 680 aa23.19■■□□□ 1.3
MSI2-210ENST00000579505 HNRNPUQ00839 825 aaKnown RBP eCLIP23.19■■□□□ 1.32e-11■■□□□ 14.3
MSI2-210ENST00000579505 NPM2Q86SE8 214 aaKnown RBP23.19■■□□□ 1.3
MSI2-210ENST00000579505 USP16Q9Y5T5 823 aa23.19■■□□□ 1.3
MSI2-210ENST00000579505 SSFA2P28290 1259 aa23.18■■□□□ 1.3
MSI2-210ENST00000579505 RPS6KA4O75676 772 aa23.17■■□□□ 1.3
MSI2-210ENST00000579505 GOLGA2Q08379 1002 aa23.17■■□□□ 1.3
MSI2-210ENST00000579505 AMIGO3Q86WK7 504 aa23.17■■□□□ 1.3
MSI2-210ENST00000579505 FLAD1Q8NFF5 587 aa23.17■■□□□ 1.3
MSI2-210ENST00000579505 HOXB7P09629 217 aa23.16■■□□□ 1.3
MSI2-210ENST00000579505 TSR2Q969E8 191 aaKnown RBP23.16■■□□□ 1.3
MSI2-210ENST00000579505 ZBTB1Q9Y2K1 713 aa23.16■■□□□ 1.3
MSI2-210ENST00000579505 RTCBQ9Y3I0 505 aaKnown RBP23.16■■□□□ 1.3
MSI2-210ENST00000579505 FANCIQ9NVI1 1328 aa23.15■■□□□ 1.3
MSI2-210ENST00000579505 ADRA2BP18089 450 aa23.15■■□□□ 1.3
MSI2-210ENST00000579505 KRT24Q2M2I5 525 aa23.15■■□□□ 1.3
MSI2-210ENST00000579505 SPINK5Q9NQ38 1064 aaPredicted RBP23.15■■□□□ 1.3
MSI2-210ENST00000579505 COL24A1Q17RW2 1714 aa23.15■■□□□ 1.3
MSI2-210ENST00000579505 SOS1Q07889 1333 aaPredicted RBP23.14■■□□□ 1.3
MSI2-210ENST00000579505 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.14■■□□□ 1.29
MSI2-210ENST00000579505 E9PSI1 815 aa23.14■■□□□ 1.29
MSI2-210ENST00000579505 A1BGP04217 495 aa23.13■■□□□ 1.29
MSI2-210ENST00000579505 COL23A1Q86Y22 540 aaPredicted RBP23.13■■□□□ 1.29
MSI2-210ENST00000579505 PDGFDQ9GZP0 370 aaPredicted RBP23.13■■□□□ 1.29
MSI2-210ENST00000579505 PHF14O94880 888 aa23.12■■□□□ 1.29
MSI2-210ENST00000579505 ERBB4Q15303 1308 aa23.11■■□□□ 1.29
MSI2-210ENST00000579505 CANXP27824 592 aaKnown RBP23.11■■□□□ 1.29
MSI2-210ENST00000579505 IL6STP40189 918 aaPredicted RBP23.11■■□□□ 1.29
MSI2-210ENST00000579505 EIF5P55010 431 aaKnown RBP23.11■■□□□ 1.29
MSI2-210ENST00000579505 TRAPPC3LQ5T215 181 aa23.11■■□□□ 1.29
MSI2-210ENST00000579505 DUSP27Q5VZP5 1158 aa23.11■■□□□ 1.29
MSI2-210ENST00000579505 SMIM5Q71RC9 77 aa23.11■■□□□ 1.29
MSI2-210ENST00000579505 COL15A1P39059 1388 aa23.11■■□□□ 1.29
MSI2-210ENST00000579505 C8orf58Q8NAV2 365 aa23.1■■□□□ 1.29
MSI2-210ENST00000579505 SLC16A10Q8TF71 515 aa23.1■■□□□ 1.29
MSI2-210ENST00000579505 NBPF26B4DH59 902 aa23.09■■□□□ 1.29
MSI2-210ENST00000579505 SLFN5Q08AF3 891 aa23.09■■□□□ 1.29
MSI2-210ENST00000579505 NBPF10Q6P3W6 841 aaKnown RBP23.09■■□□□ 1.29
MSI2-210ENST00000579505 NBPF15Q8N660 670 aa23.09■■□□□ 1.29
MSI2-210ENST00000579505 ARHGEF1Q92888 912 aaKnown RBP23.09■■□□□ 1.29
MSI2-210ENST00000579505 SCN7AQ01118 1682 aa23.09■■□□□ 1.29
MSI2-210ENST00000579505 BCORQ6W2J9 1755 aa23.09■■□□□ 1.29
MSI2-210ENST00000579505 EIF2S2P20042 333 aaKnown RBP23.07■■□□□ 1.28
MSI2-210ENST00000579505 TSPYL6Q8N831 410 aa23.07■■□□□ 1.28
MSI2-210ENST00000579505 ZBED9Q6R2W3 1325 aa23.07■■□□□ 1.28
MSI2-210ENST00000579505 MSH5O43196 834 aa23.06■■□□□ 1.28
MSI2-210ENST00000579505 RFC4P35249 363 aa23.06■■□□□ 1.28
MSI2-210ENST00000579505 PIP4K2AP48426 406 aaPredicted RBP23.06■■□□□ 1.28
MSI2-210ENST00000579505 HDGFL1Q5TGJ6 251 aa23.06■■□□□ 1.28
MSI2-210ENST00000579505 TRMT2AQ8IZ69 625 aaKnown RBP23.06■■□□□ 1.28
MSI2-210ENST00000579505 CDCA7LQ96GN5 454 aa23.06■■□□□ 1.28
MSI2-210ENST00000579505 LRP5O75197 1615 aa23.06■■□□□ 1.28
MSI2-210ENST00000579505 CACNA1FO60840 1977 aa23.05■■□□□ 1.28
MSI2-210ENST00000579505 A0A087WZG4 1122 aa23.05■■□□□ 1.28
MSI2-210ENST00000579505 ELL2O00472 640 aaPredicted RBP23.05■■□□□ 1.28
MSI2-210ENST00000579505 EXOSC9Q06265 439 aaKnown RBP23.05■■□□□ 1.28
MSI2-210ENST00000579505 PDIA6Q15084 440 aa23.05■■□□□ 1.28
MSI2-210ENST00000579505 TWISTNBQ3B726 338 aaPredicted RBP23.05■■□□□ 1.28
MSI2-210ENST00000579505 MTFR1LQ9H019 292 aa23.05■■□□□ 1.28
MSI2-210ENST00000579505 USP42Q9H9J4 1324 aaKnown RBP23.05■■□□□ 1.28
MSI2-210ENST00000579505 ZBTB7AO95365 584 aa23.03■■□□□ 1.28
MSI2-210ENST00000579505 DDX21Q9NR30 783 aaKnown RBP eCLIP23.03■■□□□ 1.28
MSI2-210ENST00000579505 NARFQ9UHQ1 456 aa23.03■■□□□ 1.28
MSI2-210ENST00000579505 CCDC30Q5VVM6 783 aa23.02■■□□□ 1.28
MSI2-210ENST00000579505 LRP10Q7Z4F1 713 aa23.02■■□□□ 1.28
MSI2-210ENST00000579505 NECTIN2Q92692 538 aa23.02■■□□□ 1.28
MSI2-210ENST00000579505 ZNF330Q9Y3S2 320 aaPredicted RBP23.02■■□□□ 1.28
MSI2-210ENST00000579505 CHPF2Q9P2E5 772 aa23.01■■□□□ 1.27
MSI2-210ENST00000579505 DBF4Q9UBU7 674 aaPredicted RBP23.01■■□□□ 1.27
MSI2-210ENST00000579505 ZPR1O75312 459 aa23■■□□□ 1.27
MSI2-210ENST00000579505 VAMP4O75379 141 aa23■■□□□ 1.27
MSI2-210ENST00000579505 GYS1P13807 737 aa23■■□□□ 1.27
MSI2-210ENST00000579505 MYL6BP14649 208 aa23■■□□□ 1.27
MSI2-210ENST00000579505 PROSER3Q2NL68 480 aa23■■□□□ 1.27
MSI2-210ENST00000579505 STK31Q9BXU1 1019 aa23■■□□□ 1.27
MSI2-210ENST00000579505 SPON1Q9HCB6 807 aa23■■□□□ 1.27
MSI2-210ENST00000579505 SRP68Q9UHB9 627 aaKnown RBP23■■□□□ 1.27
MSI2-210ENST00000579505 CT47B1P0C2W7 299 aaPredicted RBP22.99■■□□□ 1.27
MSI2-210ENST00000579505 DZIP3Q86Y13 1208 aaKnown RBP22.99■■□□□ 1.27
MSI2-210ENST00000579505 ZNF428Q96B54 188 aa22.99■■□□□ 1.27
MSI2-210ENST00000579505 NUP98P52948 1817 aa22.98■■□□□ 1.27
MSI2-210ENST00000579505 ANXA1P04083 346 aa22.98■■□□□ 1.27
MSI2-210ENST00000579505 USPL1Q5W0Q7 1092 aa22.98■■□□□ 1.27
MSI2-210ENST00000579505 SGIP1Q9BQI5 828 aa22.98■■□□□ 1.27
MSI2-210ENST00000579505 TBC1D2BQ9UPU7 963 aa22.98■■□□□ 1.27
MSI2-210ENST00000579505 ATF5Q9Y2D1 282 aaPredicted RBP22.98■■□□□ 1.27
MSI2-210ENST00000579505 RGL2O15211 777 aa22.97■■□□□ 1.27
MSI2-210ENST00000579505 CAMTA2O94983 1202 aa22.97■■□□□ 1.27
MSI2-210ENST00000579505 PTGER2P43116 358 aa22.97■■□□□ 1.27
MSI2-210ENST00000579505 NLGN1Q8N2Q7 840 aa22.97■■□□□ 1.27
MSI2-210ENST00000579505 ARXQ96QS3 562 aa22.97■■□□□ 1.27
MSI2-210ENST00000579505 BCL2L12Q9HB09 334 aa22.97■■□□□ 1.27
MSI2-210ENST00000579505 HYPKQ9NX55 129 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms