RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 ADRA2BP18089 450 aa19.85■□□□□ 0.77
LITAF-217ENST00000575426 MIER1Q8N108 512 aa19.85■□□□□ 0.77
LITAF-217ENST00000575426 SENP3-EIF4A1A0A087X0R7 540 aa19.84■□□□□ 0.77
LITAF-217ENST00000575426 INTS5Q6P9B9 1019 aaKnown RBP19.84■□□□□ 0.77
LITAF-217ENST00000575426 NPM2Q86SE8 214 aaKnown RBP19.84■□□□□ 0.77
LITAF-217ENST00000575426 RFC4P35249 363 aa19.83■□□□□ 0.77
LITAF-217ENST00000575426 EIF4A1P60842 406 aaKnown RBP19.83■□□□□ 0.77
LITAF-217ENST00000575426 NCBP3Q53F19 620 aaKnown RBP19.83■□□□□ 0.77
LITAF-217ENST00000575426 SMIM5Q71RC9 77 aa19.83■□□□□ 0.77
LITAF-217ENST00000575426 PPP1R1BQ9UD71 204 aaPredicted RBP19.83■□□□□ 0.77
LITAF-217ENST00000575426 LAMB4A4D0S4 1761 aa19.83■□□□□ 0.76
LITAF-217ENST00000575426 CHL1O00533 1208 aa19.82■□□□□ 0.76
LITAF-217ENST00000575426 CANXP27824 592 aaKnown RBP19.82■□□□□ 0.76
LITAF-217ENST00000575426 CCDC27Q2M243 656 aa19.82■□□□□ 0.76
LITAF-217ENST00000575426 AMIGO3Q86WK7 504 aa19.82■□□□□ 0.76
LITAF-217ENST00000575426 CFAP44Q96MT7 982 aa19.82■□□□□ 0.76
LITAF-217ENST00000575426 SALL2Q9Y467 1007 aaPredicted RBP19.82■□□□□ 0.76
LITAF-217ENST00000575426 USP16Q9Y5T5 823 aa19.82■□□□□ 0.76
LITAF-217ENST00000575426 POLD1P28340 1107 aa19.81■□□□□ 0.76
LITAF-217ENST00000575426 GNAI1P63096 354 aa19.81■□□□□ 0.76
LITAF-217ENST00000575426 NGEFQ8N5V2 710 aa19.81■□□□□ 0.76
LITAF-217ENST00000575426 ARHGEF1Q92888 912 aaKnown RBP19.81■□□□□ 0.76
LITAF-217ENST00000575426 ZBTB1Q9Y2K1 713 aa19.81■□□□□ 0.76
LITAF-217ENST00000575426 C4AP0C0L4 1744 aa19.8■□□□□ 0.76
LITAF-217ENST00000575426 GIGYF1O75420 1035 aaPredicted RBP19.8■□□□□ 0.76
LITAF-217ENST00000575426 PRAMEF22A3QJZ6 481 aa19.79■□□□□ 0.76
LITAF-217ENST00000575426 A1BGP04217 495 aa19.79■□□□□ 0.76
LITAF-217ENST00000575426 WWC1Q8IX03 1113 aa19.79■□□□□ 0.76
LITAF-217ENST00000575426 IFT57Q9NWB7 429 aa19.79■□□□□ 0.76
LITAF-217ENST00000575426 COL24A1Q17RW2 1714 aa19.79■□□□□ 0.76
LITAF-217ENST00000575426 SOS1Q07889 1333 aaPredicted RBP19.78■□□□□ 0.76
LITAF-217ENST00000575426 A0A087WZG4 1122 aa19.78■□□□□ 0.76
LITAF-217ENST00000575426 ZPR1O75312 459 aa19.78■□□□□ 0.76
LITAF-217ENST00000575426 MSL1Q68DK7 614 aa19.78■□□□□ 0.76
LITAF-217ENST00000575426 ZNF330Q9Y3S2 320 aaPredicted RBP19.78■□□□□ 0.76
LITAF-217ENST00000575426 COL15A1P39059 1388 aa19.77■□□□□ 0.76
LITAF-217ENST00000575426 ZNF853P0CG23 659 aa19.76■□□□□ 0.75
LITAF-217ENST00000575426 IL6STP40189 918 aaPredicted RBP19.76■□□□□ 0.75
LITAF-217ENST00000575426 ARXQ96QS3 562 aa19.76■□□□□ 0.75
LITAF-217ENST00000575426 MBIPQ9NS73 344 aa19.76■□□□□ 0.75
LITAF-217ENST00000575426 PTGER2P43116 358 aa19.75■□□□□ 0.75
LITAF-217ENST00000575426 EIF5P55010 431 aaKnown RBP19.75■□□□□ 0.75
LITAF-217ENST00000575426 NLGN1Q8N2Q7 840 aa19.75■□□□□ 0.75
LITAF-217ENST00000575426 EIF2S2P20042 333 aaKnown RBP19.74■□□□□ 0.75
LITAF-217ENST00000575426 WDR63Q8IWG1 891 aa19.74■□□□□ 0.75
LITAF-217ENST00000575426 IL16Q14005 1332 aa19.74■□□□□ 0.75
LITAF-217ENST00000575426 SGIP1Q9BQI5 828 aa19.73■□□□□ 0.75
LITAF-217ENST00000575426 NARFQ9UHQ1 456 aa19.73■□□□□ 0.75
LITAF-217ENST00000575426 USP42Q9H9J4 1324 aaKnown RBP19.73■□□□□ 0.75
LITAF-217ENST00000575426 GYS1P13807 737 aa19.72■□□□□ 0.75
LITAF-217ENST00000575426 PIP4K2AP48426 406 aaPredicted RBP19.72■□□□□ 0.75
LITAF-217ENST00000575426 USPL1Q5W0Q7 1092 aa19.72■□□□□ 0.75
LITAF-217ENST00000575426 SRP68Q9UHB9 627 aaKnown RBP19.72■□□□□ 0.75
LITAF-217ENST00000575426 ERBB4Q15303 1308 aa19.71■□□□□ 0.75
LITAF-217ENST00000575426 HOXB7P09629 217 aa19.7■□□□□ 0.74
LITAF-217ENST00000575426 KRT24Q2M2I5 525 aa19.7■□□□□ 0.74
LITAF-217ENST00000575426 DUSP27Q5VZP5 1158 aa19.7■□□□□ 0.74
LITAF-217ENST00000575426 TBC1D2BQ9UPU7 963 aa19.7■□□□□ 0.74
LITAF-217ENST00000575426 NBPF26B4DH59 902 aa19.69■□□□□ 0.74
LITAF-217ENST00000575426 MYL6BP14649 208 aa19.69■□□□□ 0.74
LITAF-217ENST00000575426 NBPF10Q6P3W6 841 aaKnown RBP19.69■□□□□ 0.74
LITAF-217ENST00000575426 DZIP3Q86Y13 1208 aaKnown RBP19.69■□□□□ 0.74
LITAF-217ENST00000575426 KLHL34Q8N239 644 aa19.69■□□□□ 0.74
LITAF-217ENST00000575426 NBPF15Q8N660 670 aa19.69■□□□□ 0.74
LITAF-217ENST00000575426 NECTIN2Q92692 538 aa19.69■□□□□ 0.74
LITAF-217ENST00000575426 CHMP4AQ9BY43 222 aa19.69■□□□□ 0.74
LITAF-217ENST00000575426 MMP10P09238 476 aa19.68■□□□□ 0.74
LITAF-217ENST00000575426 HDGFL1Q5TGJ6 251 aa19.68■□□□□ 0.74
LITAF-217ENST00000575426 TSR2Q969E8 191 aaKnown RBP19.68■□□□□ 0.74
LITAF-217ENST00000575426 PARP3Q9Y6F1 533 aa19.68■□□□□ 0.74
LITAF-217ENST00000575426 ELL2O00472 640 aaPredicted RBP19.67■□□□□ 0.74
LITAF-217ENST00000575426 FKBP8Q14318 412 aa19.67■□□□□ 0.74
LITAF-217ENST00000575426 BCORQ6W2J9 1755 aa19.66■□□□□ 0.74
LITAF-217ENST00000575426 GOLGA2Q08379 1002 aa19.66■□□□□ 0.74
LITAF-217ENST00000575426 MYH16Q9H6N6 1097 aa19.66■□□□□ 0.74
LITAF-217ENST00000575426 SCN7AQ01118 1682 aa19.65■□□□□ 0.74
LITAF-217ENST00000575426 KIF6Q6ZMV9 814 aa19.65■□□□□ 0.74
LITAF-217ENST00000575426 FHDC1Q9C0D6 1143 aaPredicted RBP19.65■□□□□ 0.74
LITAF-217ENST00000575426 ZNF652Q9Y2D9 606 aa19.65■□□□□ 0.74
LITAF-217ENST00000575426 NUP98P52948 1817 aa19.65■□□□□ 0.74
LITAF-217ENST00000575426 C8orf58Q8NAV2 365 aa19.64■□□□□ 0.73
LITAF-217ENST00000575426 DDX21Q9NR30 783 aaKnown RBP eCLIP19.64■□□□□ 0.73
LITAF-217ENST00000575426 FANCIQ9NVI1 1328 aa19.63■□□□□ 0.73
LITAF-217ENST00000575426 CAMTA2O94983 1202 aa19.63■□□□□ 0.73
LITAF-217ENST00000575426 BICDL1Q6ZP65 573 aa19.63■□□□□ 0.73
LITAF-217ENST00000575426 DBF4Q9UBU7 674 aaPredicted RBP19.63■□□□□ 0.73
LITAF-217ENST00000575426 CACNA1FO60840 1977 aa19.63■□□□□ 0.73
LITAF-217ENST00000575426 TM4SF1P30408 202 aa19.62■□□□□ 0.73
LITAF-217ENST00000575426 CCDC30Q5VVM6 783 aa19.62■□□□□ 0.73
LITAF-217ENST00000575426 CLEC4GQ6UXB4 293 aa19.62■□□□□ 0.73
LITAF-217ENST00000575426 SYT17Q9BSW7 474 aa19.62■□□□□ 0.73
LITAF-217ENST00000575426 BCL2L12Q9HB09 334 aa19.62■□□□□ 0.73
LITAF-217ENST00000575426 CHPF2Q9P2E5 772 aa19.62■□□□□ 0.73
LITAF-217ENST00000575426 AFDNP55196 1824 aaKnown RBP19.62■□□□□ 0.73
LITAF-217ENST00000575426 ZNF521Q96K83 1311 aa19.61■□□□□ 0.73
LITAF-217ENST00000575426 ANXA1P04083 346 aa19.61■□□□□ 0.73
LITAF-217ENST00000575426 NFIXQ14938 502 aa19.61■□□□□ 0.73
LITAF-217ENST00000575426 PDIA6Q15084 440 aa19.61■□□□□ 0.73
LITAF-217ENST00000575426 TWISTNBQ3B726 338 aaPredicted RBP19.61■□□□□ 0.73
LITAF-217ENST00000575426 SETDB2Q96T68 719 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms