RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 TSPYL4Q9UJ04 414 aa21.17■□□□□ 0.98
LITAF-210ENST00000571976 MYH14Q7Z406 1995 aaKnown RBP21.17■□□□□ 0.98
LITAF-210ENST00000571976 CALD1Q05682 793 aaKnown RBP21.16■□□□□ 0.98
LITAF-210ENST00000571976 NCBP3Q53F19 620 aaKnown RBP21.16■□□□□ 0.98
LITAF-210ENST00000571976 KDM3BQ7LBC6 1761 aa21.15■□□□□ 0.98
LITAF-210ENST00000571976 PTGER2P43116 358 aa21.15■□□□□ 0.98
LITAF-210ENST00000571976 EIF4A1P60842 406 aaKnown RBP21.15■□□□□ 0.98
LITAF-210ENST00000571976 ARHGEF1Q92888 912 aaKnown RBP21.15■□□□□ 0.98
LITAF-210ENST00000571976 CHL1O00533 1208 aa21.14■□□□□ 0.97
LITAF-210ENST00000571976 CCDC27Q2M243 656 aa21.14■□□□□ 0.97
LITAF-210ENST00000571976 ZBTB1Q9Y2K1 713 aa21.14■□□□□ 0.97
LITAF-210ENST00000571976 USP16Q9Y5T5 823 aa21.14■□□□□ 0.97
LITAF-210ENST00000571976 RFC4P35249 363 aa21.13■□□□□ 0.97
LITAF-210ENST00000571976 SGIP1Q9BQI5 828 aa21.13■□□□□ 0.97
LITAF-210ENST00000571976 LAS1LQ9Y4W2 734 aaKnown RBP21.13■□□□□ 0.97
LITAF-210ENST00000571976 SOS1Q07889 1333 aaPredicted RBP21.12■□□□□ 0.97
LITAF-210ENST00000571976 PRAMEF22A3QJZ6 481 aa21.12■□□□□ 0.97
LITAF-210ENST00000571976 GIGYF1O75420 1035 aaPredicted RBP21.12■□□□□ 0.97
LITAF-210ENST00000571976 POLD1P28340 1107 aa21.12■□□□□ 0.97
LITAF-210ENST00000571976 CFAP44Q96MT7 982 aa21.12■□□□□ 0.97
LITAF-210ENST00000571976 PPP1R1BQ9UD71 204 aaPredicted RBP21.12■□□□□ 0.97
LITAF-210ENST00000571976 CANXP27824 592 aaKnown RBP21.11■□□□□ 0.97
LITAF-210ENST00000571976 A1BGP04217 495 aa21.1■□□□□ 0.97
LITAF-210ENST00000571976 COL24A1Q17RW2 1714 aa21.09■□□□□ 0.97
LITAF-210ENST00000571976 SENP3-EIF4A1A0A087X0R7 540 aa21.09■□□□□ 0.97
LITAF-210ENST00000571976 IL6STP40189 918 aaPredicted RBP21.09■□□□□ 0.97
LITAF-210ENST00000571976 EIF5P55010 431 aaKnown RBP21.09■□□□□ 0.97
LITAF-210ENST00000571976 MSL1Q68DK7 614 aa21.09■□□□□ 0.97
LITAF-210ENST00000571976 WWC1Q8IX03 1113 aa21.09■□□□□ 0.97
LITAF-210ENST00000571976 NGEFQ8N5V2 710 aa21.09■□□□□ 0.97
LITAF-210ENST00000571976 IFT57Q9NWB7 429 aa21.09■□□□□ 0.97
LITAF-210ENST00000571976 ZNF853P0CG23 659 aa21.08■□□□□ 0.97
LITAF-210ENST00000571976 GNAI1P63096 354 aa21.08■□□□□ 0.97
LITAF-210ENST00000571976 MIER1Q8N108 512 aa21.08■□□□□ 0.97
LITAF-210ENST00000571976 NLGN1Q8N2Q7 840 aa21.08■□□□□ 0.97
LITAF-210ENST00000571976 ARXQ96QS3 562 aa21.08■□□□□ 0.97
LITAF-210ENST00000571976 USP42Q9H9J4 1324 aaKnown RBP21.07■□□□□ 0.96
LITAF-210ENST00000571976 A0A087WZG4 1122 aa21.07■□□□□ 0.96
LITAF-210ENST00000571976 NPM2Q86SE8 214 aaKnown RBP21.07■□□□□ 0.96
LITAF-210ENST00000571976 COL15A1P39059 1388 aa21.07■□□□□ 0.96
LITAF-210ENST00000571976 ZPR1O75312 459 aa21.06■□□□□ 0.96
LITAF-210ENST00000571976 GYS1P13807 737 aa21.06■□□□□ 0.96
LITAF-210ENST00000571976 C4AP0C0L4 1744 aa21.05■□□□□ 0.96
LITAF-210ENST00000571976 MBIPQ9NS73 344 aa21.05■□□□□ 0.96
LITAF-210ENST00000571976 SRP68Q9UHB9 627 aaKnown RBP21.05■□□□□ 0.96
LITAF-210ENST00000571976 NARFQ9UHQ1 456 aa21.05■□□□□ 0.96
LITAF-210ENST00000571976 ZNF330Q9Y3S2 320 aaPredicted RBP21.05■□□□□ 0.96
LITAF-210ENST00000571976 SALL2Q9Y467 1007 aaPredicted RBP21.05■□□□□ 0.96
LITAF-210ENST00000571976 LAMB4A4D0S4 1761 aa21.04■□□□□ 0.96
LITAF-210ENST00000571976 IL16Q14005 1332 aa21.04■□□□□ 0.96
LITAF-210ENST00000571976 USPL1Q5W0Q7 1092 aa21.03■□□□□ 0.96
LITAF-210ENST00000571976 WDR63Q8IWG1 891 aa21.03■□□□□ 0.96
LITAF-210ENST00000571976 NBPF26B4DH59 902 aa21.02■□□□□ 0.96
LITAF-210ENST00000571976 PIP4K2AP48426 406 aaPredicted RBP21.02■□□□□ 0.96
LITAF-210ENST00000571976 NBPF10Q6P3W6 841 aaKnown RBP21.02■□□□□ 0.96
LITAF-210ENST00000571976 NBPF15Q8N660 670 aa21.02■□□□□ 0.96
LITAF-210ENST00000571976 MMP10P09238 476 aa21.01■□□□□ 0.95
LITAF-210ENST00000571976 KRT24Q2M2I5 525 aa21.01■□□□□ 0.95
LITAF-210ENST00000571976 ERBB4Q15303 1308 aa21.01■□□□□ 0.95
LITAF-210ENST00000571976 HOXB7P09629 217 aa21■□□□□ 0.95
LITAF-210ENST00000571976 EIF2S2P20042 333 aaKnown RBP21■□□□□ 0.95
LITAF-210ENST00000571976 FKBP8Q14318 412 aa21■□□□□ 0.95
LITAF-210ENST00000571976 TBC1D2BQ9UPU7 963 aa21■□□□□ 0.95
LITAF-210ENST00000571976 DZIP3Q86Y13 1208 aaKnown RBP20.99■□□□□ 0.95
LITAF-210ENST00000571976 FHDC1Q9C0D6 1143 aaPredicted RBP20.99■□□□□ 0.95
LITAF-210ENST00000571976 DUSP27Q5VZP5 1158 aa20.98■□□□□ 0.95
LITAF-210ENST00000571976 BCL2L12Q9HB09 334 aa20.98■□□□□ 0.95
LITAF-210ENST00000571976 SYT17Q9BSW7 474 aa20.97■□□□□ 0.95
LITAF-210ENST00000571976 PARP3Q9Y6F1 533 aa20.97■□□□□ 0.95
LITAF-210ENST00000571976 CAMTA2O94983 1202 aa20.96■□□□□ 0.95
LITAF-210ENST00000571976 MYL6BP14649 208 aa20.96■□□□□ 0.95
LITAF-210ENST00000571976 TM4SF1P30408 202 aa20.96■□□□□ 0.95
LITAF-210ENST00000571976 TSR2Q969E8 191 aaKnown RBP20.96■□□□□ 0.95
LITAF-210ENST00000571976 PDIA6Q15084 440 aa20.95■□□□□ 0.94
LITAF-210ENST00000571976 HDGFL1Q5TGJ6 251 aa20.95■□□□□ 0.94
LITAF-210ENST00000571976 KLHL34Q8N239 644 aa20.95■□□□□ 0.94
LITAF-210ENST00000571976 RGL2O15211 777 aa20.94■□□□□ 0.94
LITAF-210ENST00000571976 NFIXQ14938 502 aa20.94■□□□□ 0.94
LITAF-210ENST00000571976 C8orf58Q8NAV2 365 aa20.94■□□□□ 0.94
LITAF-210ENST00000571976 NECTIN2Q92692 538 aa20.94■□□□□ 0.94
LITAF-210ENST00000571976 CHMP4AQ9BY43 222 aa20.94■□□□□ 0.94
LITAF-210ENST00000571976 CD2APQ9Y5K6 639 aa20.94■□□□□ 0.94
LITAF-210ENST00000571976 ELL2O00472 640 aaPredicted RBP20.93■□□□□ 0.94
LITAF-210ENST00000571976 CLEC4GQ6UXB4 293 aa20.93■□□□□ 0.94
LITAF-210ENST00000571976 DDX21Q9NR30 783 aaKnown RBP eCLIP20.93■□□□□ 0.94
LITAF-210ENST00000571976 ZNF652Q9Y2D9 606 aa20.93■□□□□ 0.94
LITAF-210ENST00000571976 ZNF521Q96K83 1311 aa20.93■□□□□ 0.94
LITAF-210ENST00000571976 POLRMTO00411 1230 aaKnown RBP20.92■□□□□ 0.94
LITAF-210ENST00000571976 DDR1Q08345 913 aa20.92■□□□□ 0.94
LITAF-210ENST00000571976 GOLGA2Q08379 1002 aa20.92■□□□□ 0.94
LITAF-210ENST00000571976 LRP10Q7Z4F1 713 aa20.92■□□□□ 0.94
LITAF-210ENST00000571976 MYH16Q9H6N6 1097 aa20.92■□□□□ 0.94
LITAF-210ENST00000571976 DBF4Q9UBU7 674 aaPredicted RBP20.92■□□□□ 0.94
LITAF-210ENST00000571976 SCN7AQ01118 1682 aa20.92■□□□□ 0.94
LITAF-210ENST00000571976 PROSER3Q2NL68 480 aa20.91■□□□□ 0.94
LITAF-210ENST00000571976 TBC1D9BQ66K14 1250 aa20.91■□□□□ 0.94
LITAF-210ENST00000571976 KIF6Q6ZMV9 814 aa20.91■□□□□ 0.94
LITAF-210ENST00000571976 FANCIQ9NVI1 1328 aa20.91■□□□□ 0.94
LITAF-210ENST00000571976 CHPF2Q9P2E5 772 aa20.91■□□□□ 0.94
LITAF-210ENST00000571976 MAP3K15Q6ZN16 1313 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms