RNA–Protein interactions for RNA: ENST00000570279.1

CFDP1-210, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-210ENST00000570279 GTF2IP78347 998 aa5.69□□□□□ -1.5
CFDP1-210ENST00000570279 POU4F2Q12837 409 aa5.69□□□□□ -1.5
CFDP1-210ENST00000570279 DDX10Q13206 875 aaKnown RBP5.69□□□□□ -1.5
CFDP1-210ENST00000570279 PLEKHM2Q8IWE5 1019 aa5.69□□□□□ -1.5
CFDP1-210ENST00000570279 ZSCAN10Q96SZ4 725 aaPredicted RBP5.69□□□□□ -1.5
CFDP1-210ENST00000570279 PCDHGA11Q9Y5H2 935 aa5.69□□□□□ -1.5
CFDP1-210ENST00000570279 FHOD3Q2V2M9 1422 aa5.68□□□□□ -1.5
CFDP1-210ENST00000570279 WDR97A6NE52 1622 aa5.68□□□□□ -1.5
CFDP1-210ENST00000570279 SPATA31C2B4DYI2 1134 aa5.68□□□□□ -1.5
CFDP1-210ENST00000570279 VSIG8P0DPA2 414 aa5.68□□□□□ -1.5
CFDP1-210ENST00000570279 ITGA6P23229 1130 aa5.68□□□□□ -1.5
CFDP1-210ENST00000570279 GTF2E1P29083 439 aaPredicted RBP5.68□□□□□ -1.5
CFDP1-210ENST00000570279 TLR1Q15399 786 aa5.68□□□□□ -1.5
CFDP1-210ENST00000570279 NBPF10Q6P3W6 841 aaKnown RBP5.68□□□□□ -1.5
CFDP1-210ENST00000570279 TAS1R3Q7RTX0 852 aa5.68□□□□□ -1.5
CFDP1-210ENST00000570279 NBPF15Q8N660 670 aa5.68□□□□□ -1.5
CFDP1-210ENST00000570279 SIN3AQ96ST3 1273 aa5.68□□□□□ -1.5
CFDP1-210ENST00000570279 FHDC1Q9C0D6 1143 aaPredicted RBP5.68□□□□□ -1.5
CFDP1-210ENST00000570279 ZNF777Q9ULD5 760 aaPredicted RBP5.68□□□□□ -1.5
CFDP1-210ENST00000570279 TCOF1Q13428 1488 aaKnown RBP5.68□□□□□ -1.5
CFDP1-210ENST00000570279 EHBP1L1Q8N3D4 1523 aa5.68□□□□□ -1.5
CFDP1-210ENST00000570279 NAIPQ13075 1403 aa5.67□□□□□ -1.5
CFDP1-210ENST00000570279 GRIN2BQ13224 1484 aa5.67□□□□□ -1.5
CFDP1-210ENST00000570279 TMEM229AB2RXF0 380 aa5.67□□□□□ -1.5
CFDP1-210ENST00000570279 WASLO00401 505 aaPredicted RBP5.67□□□□□ -1.5
CFDP1-210ENST00000570279 GMPRP36959 345 aa5.67□□□□□ -1.5
CFDP1-210ENST00000570279 PSME1Q06323 249 aa5.67□□□□□ -1.5
CFDP1-210ENST00000570279 GNASQ5JWF2 1037 aa5.67□□□□□ -1.5
CFDP1-210ENST00000570279 TMEM214Q6NUQ4 689 aaKnown RBP5.67□□□□□ -1.5
CFDP1-210ENST00000570279 TRIM50Q86XT4 487 aa5.67□□□□□ -1.5
CFDP1-210ENST00000570279 TFIP11Q9UBB9 837 aaKnown RBP5.67□□□□□ -1.5
CFDP1-210ENST00000570279 ARHGEF11O15085 1522 aa5.67□□□□□ -1.5
CFDP1-210ENST00000570279 SAMD9Q5K651 1589 aa5.67□□□□□ -1.5
CFDP1-210ENST00000570279 LAMC3Q9Y6N6 1575 aa5.67□□□□□ -1.5
CFDP1-210ENST00000570279 ROCK1Q13464 1354 aa5.67□□□□□ -1.5
CFDP1-210ENST00000570279 PDS5BQ9NTI5 1447 aa5.66□□□□□ -1.5
CFDP1-210ENST00000570279 NCOA2Q15596 1464 aa5.66□□□□□ -1.5
CFDP1-210ENST00000570279 CDC14CA4D256 554 aa5.66□□□□□ -1.5
CFDP1-210ENST00000570279 PALM3A6NDB9 673 aaPredicted RBP5.66□□□□□ -1.5
CFDP1-210ENST00000570279 WIPF1O43516 503 aa5.66□□□□□ -1.5
CFDP1-210ENST00000570279 ATP1A2P50993 1020 aa5.66□□□□□ -1.5
CFDP1-210ENST00000570279 WDR44Q5JSH3 913 aa5.66□□□□□ -1.5
CFDP1-210ENST00000570279 RHBDD1Q8TEB9 315 aa5.66□□□□□ -1.5
CFDP1-210ENST00000570279 PPP1R12CQ9BZL4 782 aa5.66□□□□□ -1.5
CFDP1-210ENST00000570279 ZMYND15Q9H091 742 aa5.66□□□□□ -1.5
CFDP1-210ENST00000570279 MKRN1Q9UHC7 482 aaKnown RBP5.66□□□□□ -1.5
CFDP1-210ENST00000570279 SERTAD1Q9UHV2 236 aa5.66□□□□□ -1.5
CFDP1-210ENST00000570279 DYRK1BQ9Y463 629 aa5.66□□□□□ -1.5
CFDP1-210ENST00000570279 MAFBQ9Y5Q3 323 aaPredicted RBP5.66□□□□□ -1.5
CFDP1-210ENST00000570279 PHKA2P46019 1235 aa5.65□□□□□ -1.5
CFDP1-210ENST00000570279 SMTNP53814 917 aa5.65□□□□□ -1.5
CFDP1-210ENST00000570279 CLDN10P78369 228 aa5.65□□□□□ -1.5
CFDP1-210ENST00000570279 NANOS1Q8WY41 292 aaKnown RBP5.65□□□□□ -1.5
CFDP1-210ENST00000570279 GAS2L1Q99501 681 aaPredicted RBP5.65□□□□□ -1.5
CFDP1-210ENST00000570279 TIMMDC1Q9NPL8 285 aa5.65□□□□□ -1.5
CFDP1-210ENST00000570279 PTPN23Q9H3S7 1636 aa5.65□□□□□ -1.51
CFDP1-210ENST00000570279 GAPVD1Q14C86 1478 aa5.64□□□□□ -1.51
CFDP1-210ENST00000570279 RAD54L2Q9Y4B4 1467 aa5.64□□□□□ -1.51
CFDP1-210ENST00000570279 BACH1O14867 736 aa5.64□□□□□ -1.51
CFDP1-210ENST00000570279 C4orf17Q53FE4 359 aa5.64□□□□□ -1.51
CFDP1-210ENST00000570279 CCDC102BQ68D86 513 aa5.64□□□□□ -1.51
CFDP1-210ENST00000570279 RIPOR1Q6ZS17 1223 aa5.64□□□□□ -1.51
CFDP1-210ENST00000570279 SV2AQ7L0J3 742 aa5.64□□□□□ -1.51
CFDP1-210ENST00000570279 OGFOD1Q8N543 542 aa5.64□□□□□ -1.51
CFDP1-210ENST00000570279 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.64□□□□□ -1.51
CFDP1-210ENST00000570279 TPCN2Q8NHX9 752 aa5.64□□□□□ -1.51
CFDP1-210ENST00000570279 SLC4A9Q96Q91 983 aa5.64□□□□□ -1.51
CFDP1-210ENST00000570279 DNAAF2Q9NVR5 837 aaKnown RBP5.64□□□□□ -1.51
CFDP1-210ENST00000570279 ZNF358Q9NW07 568 aa5.64□□□□□ -1.51
CFDP1-210ENST00000570279 CUEDC1Q9NWM3 386 aaPredicted RBP5.64□□□□□ -1.51
CFDP1-210ENST00000570279 KIAA1024Q9UPX6 916 aa5.64□□□□□ -1.51
CFDP1-210ENST00000570279 ARID4BQ4LE39 1312 aaPredicted RBP5.64□□□□□ -1.51
CFDP1-210ENST00000570279 FANCIQ9NVI1 1328 aa5.64□□□□□ -1.51
CFDP1-210ENST00000570279 UGGT2Q9NYU1 1516 aa5.64□□□□□ -1.51
CFDP1-210ENST00000570279 A0A1B0GTH6 734 aa5.63□□□□□ -1.51
CFDP1-210ENST00000570279 A6NJY4 79 aa5.63□□□□□ -1.51
CFDP1-210ENST00000570279 LMOD1P29536 600 aaPredicted RBP5.63□□□□□ -1.51
CFDP1-210ENST00000570279 MTFR1Q15390 333 aa5.63□□□□□ -1.51
CFDP1-210ENST00000570279 TRIM22Q8IYM9 498 aa5.63□□□□□ -1.51
CFDP1-210ENST00000570279 VWA5B2Q8N398 1253 aa5.63□□□□□ -1.51
CFDP1-210ENST00000570279 LARGE2Q8N3Y3 721 aa5.63□□□□□ -1.51
CFDP1-210ENST00000570279 GPR161Q8N6U8 529 aaKnown RBP5.63□□□□□ -1.51
CFDP1-210ENST00000570279 ZNF594Q96JF6 807 aaPredicted RBP5.63□□□□□ -1.51
CFDP1-210ENST00000570279 PTPRKQ15262 1439 aa5.63□□□□□ -1.51
CFDP1-210ENST00000570279 ABCA5Q8WWZ7 1642 aa5.63□□□□□ -1.51
CFDP1-210ENST00000570279 KIF21AQ7Z4S6 1674 aa5.63□□□□□ -1.51
CFDP1-210ENST00000570279 H7C1W4 665 aa5.62□□□□□ -1.51
CFDP1-210ENST00000570279 ZBTB7BO15156 539 aaPredicted RBP5.62□□□□□ -1.51
CFDP1-210ENST00000570279 F11P03951 625 aa5.62□□□□□ -1.51
CFDP1-210ENST00000570279 RASA1P20936 1047 aa5.62□□□□□ -1.51
CFDP1-210ENST00000570279 PLA2G4AP47712 749 aa5.62□□□□□ -1.51
CFDP1-210ENST00000570279 INSM1Q01101 510 aaPredicted RBP5.62□□□□□ -1.51
CFDP1-210ENST00000570279 CFAP70Q5T0N1 1121 aa5.62□□□□□ -1.51
CFDP1-210ENST00000570279 SIX5Q8N196 739 aa5.62□□□□□ -1.51
CFDP1-210ENST00000570279 ZNF837Q96EG3 531 aaPredicted RBP5.62□□□□□ -1.51
CFDP1-210ENST00000570279 GMCL1Q96IK5 515 aa5.62□□□□□ -1.51
CFDP1-210ENST00000570279 NIFKQ9BYG3 293 aaKnown RBP5.62□□□□□ -1.51
CFDP1-210ENST00000570279 GPAMQ9HCL2 828 aa5.62□□□□□ -1.51
CFDP1-210ENST00000570279 IQSEC3Q9UPP2 1182 aaPredicted RBP5.62□□□□□ -1.51
CFDP1-210ENST00000570279 CDK11AQ9UQ88 783 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms