RNA–Protein interactions for RNA: ENST00000570279.1

CFDP1-210, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-210ENST00000570279 AEBP2Q6ZN18 517 aaPredicted RBP16.15■□□□□ 0.18
CFDP1-210ENST00000570279 CHIC1Q5VXU3 224 aa15.67■□□□□ 0.1
CFDP1-210ENST00000570279 PHF23Q9BUL5 403 aaPredicted RBP13.76□□□□□ -0.21
CFDP1-210ENST00000570279 SENP3Q9H4L4 574 aaPredicted RBP13.73□□□□□ -0.21
CFDP1-210ENST00000570279 FOXD1Q16676 465 aa12.76□□□□□ -0.37
CFDP1-210ENST00000570279 PLPPR3Q6T4P5 718 aa12.7□□□□□ -0.38
CFDP1-210ENST00000570279 PPP6R1Q9UPN7 881 aa12.18□□□□□ -0.46
CFDP1-210ENST00000570279 ADRA2BP18089 450 aa12.17□□□□□ -0.46
CFDP1-210ENST00000570279 PIAS4Q8N2W9 510 aaPredicted RBP12.02□□□□□ -0.49
CFDP1-210ENST00000570279 POTEDQ86YR6 584 aa11.84□□□□□ -0.51
CFDP1-210ENST00000570279 MSH5O43196 834 aa11.82□□□□□ -0.52
CFDP1-210ENST00000570279 PPP4R3CPQ6ZMV5 832 aa11.17□□□□□ -0.62
CFDP1-210ENST00000570279 SCAF1Q9H7N4 1312 aaKnown RBP11.15□□□□□ -0.62
CFDP1-210ENST00000570279 MAPK8IP2Q13387 824 aaPredicted RBP11.07□□□□□ -0.64
CFDP1-210ENST00000570279 DMRT2Q9Y5R5 561 aa10.94□□□□□ -0.66
CFDP1-210ENST00000570279 CNKSR2Q8WXI2 1034 aa10.88□□□□□ -0.67
CFDP1-210ENST00000570279 NCBP3Q53F19 620 aaKnown RBP10.85□□□□□ -0.67
CFDP1-210ENST00000570279 KCNA4P22459 653 aa10.79□□□□□ -0.68
CFDP1-210ENST00000570279 NPM3O75607 178 aaKnown RBP10.7□□□□□ -0.7
CFDP1-210ENST00000570279 RNF216Q9NWF9 866 aaPredicted RBP10.69□□□□□ -0.7
CFDP1-210ENST00000570279 HOXD11P31277 338 aaPredicted RBP10.67□□□□□ -0.7
CFDP1-210ENST00000570279 DCAF8L1A6NGE4 600 aa10.5□□□□□ -0.73
CFDP1-210ENST00000570279 DNAJC5BQ9UF47 199 aa10.37□□□□□ -0.75
CFDP1-210ENST00000570279 SLC4A1APQ9BWU0 796 aaKnown RBP10.26□□□□□ -0.77
CFDP1-210ENST00000570279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.18□□□□□ -0.783e-12■■□□□ 12.5
CFDP1-210ENST00000570279 SLC4A2P04920 1241 aa10.11□□□□□ -0.79
CFDP1-210ENST00000570279 RNF39Q9H2S5 420 aa10.1□□□□□ -0.79
CFDP1-210ENST00000570279 U3KPZ7 1027 aaPredicted RBP10.01□□□□□ -0.81
CFDP1-210ENST00000570279 C1QBPQ07021 282 aaKnown RBP9.98□□□□□ -0.81
CFDP1-210ENST00000570279 FOXD4L1Q9NU39 408 aa9.97□□□□□ -0.81
CFDP1-210ENST00000570279 ZBTB22O15209 634 aa9.93□□□□□ -0.82
CFDP1-210ENST00000570279 CACNB1Q02641 598 aaPredicted RBP9.92□□□□□ -0.82
CFDP1-210ENST00000570279 MYCNP04198 464 aaPredicted RBP9.89□□□□□ -0.83
CFDP1-210ENST00000570279 EHMT2Q96KQ7 1210 aa9.87□□□□□ -0.83
CFDP1-210ENST00000570279 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.85□□□□□ -0.83
CFDP1-210ENST00000570279 HNRNPUL2Q1KMD3 747 aaKnown RBP9.85□□□□□ -0.83
CFDP1-210ENST00000570279 SAMD1Q6SPF0 538 aaPredicted RBP9.81□□□□□ -0.84
CFDP1-210ENST00000570279 APLP2Q06481 763 aa9.78□□□□□ -0.84
CFDP1-210ENST00000570279 CSRNP3Q8WYN3 585 aa9.78□□□□□ -0.84
CFDP1-210ENST00000570279 SPINK5Q9NQ38 1064 aaPredicted RBP9.76□□□□□ -0.85
CFDP1-210ENST00000570279 CAPN15O75808 1086 aa9.73□□□□□ -0.85
CFDP1-210ENST00000570279 TRHP20396 242 aaPredicted RBP9.66□□□□□ -0.86
CFDP1-210ENST00000570279 ZNF219Q9P2Y4 722 aaPredicted RBP9.66□□□□□ -0.86
CFDP1-210ENST00000570279 ATXN8OSP0DMR3 200 aa9.62□□□□□ -0.87
CFDP1-210ENST00000570279 ATF5Q9Y2D1 282 aaPredicted RBP9.62□□□□□ -0.87
CFDP1-210ENST00000570279 DSG3P32926 999 aa9.58□□□□□ -0.88
CFDP1-210ENST00000570279 ABCB7O75027 752 aa9.54□□□□□ -0.88
CFDP1-210ENST00000570279 POLA2Q14181 598 aa9.47□□□□□ -0.89
CFDP1-210ENST00000570279 ZBTB12Q9Y330 459 aaPredicted RBP9.32□□□□□ -0.92
CFDP1-210ENST00000570279 FBLN2P98095 1184 aa9.24□□□□□ -0.93
CFDP1-210ENST00000570279 MKRN4PQ13434 485 aaPredicted RBP9.19□□□□□ -0.94
CFDP1-210ENST00000570279 OSCARQ8IYS5 282 aa9.17□□□□□ -0.94
CFDP1-210ENST00000570279 RBM42Q9BTD8 480 aaKnown RBP9.15□□□□□ -0.94
CFDP1-210ENST00000570279 POTEHQ6S545 545 aa9.11□□□□□ -0.95
CFDP1-210ENST00000570279 SPDYE2BA6NHP3 402 aa9.04□□□□□ -0.96
CFDP1-210ENST00000570279 SPDYE6P0CI01 402 aa9.04□□□□□ -0.96
CFDP1-210ENST00000570279 SPDYE2Q495Y8 402 aa9.04□□□□□ -0.96
CFDP1-210ENST00000570279 AKT1S1Q96B36 256 aa9□□□□□ -0.97
CFDP1-210ENST00000570279 ZNF692Q9BU19 519 aaPredicted RBP9□□□□□ -0.97
CFDP1-210ENST00000570279 SSUH2Q9Y2M2 353 aa8.96□□□□□ -0.98
CFDP1-210ENST00000570279 SPDYE4A6NLX3 237 aa8.95□□□□□ -0.98
CFDP1-210ENST00000570279 REM2Q8IYK8 340 aaPredicted RBP8.91□□□□□ -0.98
CFDP1-210ENST00000570279 PABPN1Q86U42 306 aaKnown RBP eCLIP8.88□□□□□ -0.99
CFDP1-210ENST00000570279 FKBP8Q14318 412 aa8.86□□□□□ -0.99
CFDP1-210ENST00000570279 PITPNM1O00562 1244 aa8.82□□□□□ -1
CFDP1-210ENST00000570279 CHRDL2Q6WN34 429 aa8.8□□□□□ -1
CFDP1-210ENST00000570279 SPDYE1Q8NFV5 336 aaPredicted RBP8.8□□□□□ -1
CFDP1-210ENST00000570279 CLEC11AQ9Y240 323 aa8.78□□□□□ -1
CFDP1-210ENST00000570279 PROM2Q8N271 834 aa8.77□□□□□ -1.01
CFDP1-210ENST00000570279 STAG3Q9UJ98 1225 aa8.7□□□□□ -1.02
CFDP1-210ENST00000570279 PRR29P0C7W0 189 aa8.68□□□□□ -1.02
CFDP1-210ENST00000570279 FXR2P51116 673 aaKnown RBP eCLIP8.66□□□□□ -1.02
CFDP1-210ENST00000570279 PIP4P2Q8N4L2 257 aa8.66□□□□□ -1.02
CFDP1-210ENST00000570279 PRKAR2AP13861 404 aaKnown RBP8.6□□□□□ -1.03
CFDP1-210ENST00000570279 FBXO3Q9UK99 471 aa8.58□□□□□ -1.04
CFDP1-210ENST00000570279 CHADLQ6NUI6 762 aa8.57□□□□□ -1.04
CFDP1-210ENST00000570279 CREBZFQ9NS37 354 aa8.53□□□□□ -1.04
CFDP1-210ENST00000570279 MIER1Q8N108 512 aa8.5□□□□□ -1.05
CFDP1-210ENST00000570279 PLEKHG5O94827 1062 aa8.48□□□□□ -1.05
CFDP1-210ENST00000570279 PLCD3Q8N3E9 789 aa8.48□□□□□ -1.05
CFDP1-210ENST00000570279 FARP1Q9Y4F1 1045 aaPredicted RBP8.48□□□□□ -1.05
CFDP1-210ENST00000570279 VASPP50552 380 aaPredicted RBP8.46□□□□□ -1.06
CFDP1-210ENST00000570279 MNX1P50219 401 aaPredicted RBP8.44□□□□□ -1.06
CFDP1-210ENST00000570279 HAX1O00165 279 aa8.42□□□□□ -1.06
CFDP1-210ENST00000570279 NPM1P06748 294 aaKnown RBP eCLIP8.4□□□□□ -1.06
CFDP1-210ENST00000570279 ZBTB47Q9UFB7 747 aaPredicted RBP8.4□□□□□ -1.06
CFDP1-210ENST00000570279 C19orf67A6NJJ6 358 aa8.37□□□□□ -1.07
CFDP1-210ENST00000570279 CD44P16070 742 aaKnown RBP8.35□□□□□ -1.07
CFDP1-210ENST00000570279 KLHL34Q8N239 644 aa8.35□□□□□ -1.07
CFDP1-210ENST00000570279 IFNLR1Q8IU57 520 aaPredicted RBP8.33□□□□□ -1.08
CFDP1-210ENST00000570279 EVX2Q03828 476 aa8.32□□□□□ -1.08
CFDP1-210ENST00000570279 PAK3O75914 559 aaPredicted RBP8.3□□□□□ -1.08
CFDP1-210ENST00000570279 NUBP1P53384 320 aa8.28□□□□□ -1.08
CFDP1-210ENST00000570279 RASEFQ8IZ41 740 aa8.28□□□□□ -1.08
CFDP1-210ENST00000570279 ZRANB1Q9UGI0 708 aa8.28□□□□□ -1.08
CFDP1-210ENST00000570279 SP7Q8TDD2 431 aaPredicted RBP8.26□□□□□ -1.09
CFDP1-210ENST00000570279 TSPYL2Q9H2G4 693 aaPredicted RBP8.26□□□□□ -1.09
CFDP1-210ENST00000570279 SPOCK2Q92563 424 aa8.25□□□□□ -1.09
CFDP1-210ENST00000570279 FAM212AQ96EL1 285 aa8.24□□□□□ -1.09
CFDP1-210ENST00000570279 ZNF579Q8NAF0 562 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms