RNA–Protein interactions for RNA: ENST00000567393.5

NEIL1-213, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 1,221 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-213ENST00000567393 MSL1Q68DK7 614 aa17.45■□□□□ 0.38
NEIL1-213ENST00000567393 ARHGEF1Q92888 912 aaKnown RBP17.45■□□□□ 0.38
NEIL1-213ENST00000567393 MIS18AQ9NYP9 233 aa17.45■□□□□ 0.38
NEIL1-213ENST00000567393 TRIM35Q9UPQ4 493 aa17.45■□□□□ 0.38
NEIL1-213ENST00000567393 ZBTB1Q9Y2K1 713 aa17.45■□□□□ 0.38
NEIL1-213ENST00000567393 TSPYL4Q9UJ04 414 aa17.44■□□□□ 0.38
NEIL1-213ENST00000567393 DLG5Q8TDM6 1919 aa17.43■□□□□ 0.38
NEIL1-213ENST00000567393 COL15A1P39059 1388 aa17.42■□□□□ 0.38
NEIL1-213ENST00000567393 EIF4A1P60842 406 aaKnown RBP17.42■□□□□ 0.38
NEIL1-213ENST00000567393 CALD1Q05682 793 aaKnown RBP17.42■□□□□ 0.38
NEIL1-213ENST00000567393 NLGN1Q8N2Q7 840 aa17.42■□□□□ 0.38
NEIL1-213ENST00000567393 COL24A1Q17RW2 1714 aa17.41■□□□□ 0.38
NEIL1-213ENST00000567393 CANXP27824 592 aaKnown RBP17.41■□□□□ 0.38
NEIL1-213ENST00000567393 USP42Q9H9J4 1324 aaKnown RBP17.41■□□□□ 0.38
NEIL1-213ENST00000567393 SRCAPQ6ZRS2 3230 aa17.41■□□□□ 0.38
NEIL1-213ENST00000567393 A0A087WZG4 1122 aa17.4■□□□□ 0.38
NEIL1-213ENST00000567393 IL6STP40189 918 aaPredicted RBP17.4■□□□□ 0.38
NEIL1-213ENST00000567393 EIF5P55010 431 aaKnown RBP17.4■□□□□ 0.38
NEIL1-213ENST00000567393 FHDC1Q9C0D6 1143 aaPredicted RBP17.4■□□□□ 0.38
NEIL1-213ENST00000567393 KDM3BQ7LBC6 1761 aa17.4■□□□□ 0.38
NEIL1-213ENST00000567393 PRAMEF22A3QJZ6 481 aa17.39■□□□□ 0.37
NEIL1-213ENST00000567393 CHL1O00533 1208 aa17.39■□□□□ 0.37
NEIL1-213ENST00000567393 ZPR1O75312 459 aa17.39■□□□□ 0.37
NEIL1-213ENST00000567393 GIGYF1O75420 1035 aaPredicted RBP17.39■□□□□ 0.37
NEIL1-213ENST00000567393 GYS1P13807 737 aa17.39■□□□□ 0.37
NEIL1-213ENST00000567393 NCBP3Q53F19 620 aaKnown RBP17.39■□□□□ 0.37
NEIL1-213ENST00000567393 NPM2Q86SE8 214 aaKnown RBP17.39■□□□□ 0.37
NEIL1-213ENST00000567393 USP16Q9Y5T5 823 aa17.39■□□□□ 0.37
NEIL1-213ENST00000567393 MYH14Q7Z406 1995 aaKnown RBP17.39■□□□□ 0.37
NEIL1-213ENST00000567393 A1BGP04217 495 aa17.38■□□□□ 0.37
NEIL1-213ENST00000567393 NARFQ9UHQ1 456 aa17.38■□□□□ 0.37
NEIL1-213ENST00000567393 MMP10P09238 476 aa17.37■□□□□ 0.37
NEIL1-213ENST00000567393 CCDC27Q2M243 656 aa17.37■□□□□ 0.37
NEIL1-213ENST00000567393 CFAP44Q96MT7 982 aa17.37■□□□□ 0.37
NEIL1-213ENST00000567393 SYT17Q9BSW7 474 aa17.37■□□□□ 0.37
NEIL1-213ENST00000567393 SRP68Q9UHB9 627 aaKnown RBP17.37■□□□□ 0.37
NEIL1-213ENST00000567393 C4AP0C0L4 1744 aa17.36■□□□□ 0.37
NEIL1-213ENST00000567393 FAM9BQ8IZU0 186 aa17.36■□□□□ 0.37
NEIL1-213ENST00000567393 IFT57Q9NWB7 429 aa17.36■□□□□ 0.37
NEIL1-213ENST00000567393 ZNF330Q9Y3S2 320 aaPredicted RBP17.36■□□□□ 0.37
NEIL1-213ENST00000567393 LAS1LQ9Y4W2 734 aaKnown RBP17.36■□□□□ 0.37
NEIL1-213ENST00000567393 CCER2I3L3R5 266 aa17.35■□□□□ 0.37
NEIL1-213ENST00000567393 GNAI1P63096 354 aa17.35■□□□□ 0.37
NEIL1-213ENST00000567393 USPL1Q5W0Q7 1092 aa17.35■□□□□ 0.37
NEIL1-213ENST00000567393 KLHL34Q8N239 644 aa17.35■□□□□ 0.37
NEIL1-213ENST00000567393 FKBP8Q14318 412 aa17.34■□□□□ 0.37
NEIL1-213ENST00000567393 ERBB4Q15303 1308 aa17.34■□□□□ 0.37
NEIL1-213ENST00000567393 CD2APQ9Y5K6 639 aa17.34■□□□□ 0.37
NEIL1-213ENST00000567393 ZNF853P0CG23 659 aa17.33■□□□□ 0.36
NEIL1-213ENST00000567393 NGEFQ8N5V2 710 aa17.33■□□□□ 0.36
NEIL1-213ENST00000567393 PARP3Q9Y6F1 533 aa17.33■□□□□ 0.36
NEIL1-213ENST00000567393 LAMB4A4D0S4 1761 aa17.33■□□□□ 0.36
NEIL1-213ENST00000567393 NBPF26B4DH59 902 aa17.32■□□□□ 0.36
NEIL1-213ENST00000567393 HOXB7P09629 217 aa17.32■□□□□ 0.36
NEIL1-213ENST00000567393 DIEXFQ68CQ4 756 aaKnown RBP17.32■□□□□ 0.36
NEIL1-213ENST00000567393 NBPF10Q6P3W6 841 aaKnown RBP17.32■□□□□ 0.36
NEIL1-213ENST00000567393 WWC1Q8IX03 1113 aa17.32■□□□□ 0.36
NEIL1-213ENST00000567393 NBPF15Q8N660 670 aa17.32■□□□□ 0.36
NEIL1-213ENST00000567393 MBIPQ9NS73 344 aa17.32■□□□□ 0.36
NEIL1-213ENST00000567393 DCAF8L1A6NGE4 600 aa17.31■□□□□ 0.36
NEIL1-213ENST00000567393 PIP4K2AP48426 406 aaPredicted RBP17.31■□□□□ 0.36
NEIL1-213ENST00000567393 DZIP3Q86Y13 1208 aaKnown RBP17.31■□□□□ 0.36
NEIL1-213ENST00000567393 BCL2L12Q9HB09 334 aa17.31■□□□□ 0.36
NEIL1-213ENST00000567393 TBC1D2BQ9UPU7 963 aa17.31■□□□□ 0.36
NEIL1-213ENST00000567393 IL16Q14005 1332 aa17.3■□□□□ 0.36
NEIL1-213ENST00000567393 RGL2O15211 777 aa17.3■□□□□ 0.36
NEIL1-213ENST00000567393 CAMTA2O94983 1202 aa17.29■□□□□ 0.36
NEIL1-213ENST00000567393 TM4SF1P30408 202 aa17.29■□□□□ 0.36
NEIL1-213ENST00000567393 DDR1Q08345 913 aa17.29■□□□□ 0.36
NEIL1-213ENST00000567393 NFIXQ14938 502 aa17.29■□□□□ 0.36
NEIL1-213ENST00000567393 ZNF652Q9Y2D9 606 aa17.29■□□□□ 0.36
NEIL1-213ENST00000567393 C10orf71Q711Q0 1435 aa17.29■□□□□ 0.36
NEIL1-213ENST00000567393 SENP3-EIF4A1A0A087X0R7 540 aa17.28■□□□□ 0.36
NEIL1-213ENST00000567393 POLRMTO00411 1230 aaKnown RBP17.28■□□□□ 0.36
NEIL1-213ENST00000567393 EIF2S2P20042 333 aaKnown RBP17.28■□□□□ 0.36
NEIL1-213ENST00000567393 KRT24Q2M2I5 525 aa17.28■□□□□ 0.36
NEIL1-213ENST00000567393 NLGN2Q8NFZ4 835 aa17.28■□□□□ 0.36
NEIL1-213ENST00000567393 SCN7AQ01118 1682 aa17.28■□□□□ 0.36
NEIL1-213ENST00000567393 CLEC4GQ6UXB4 293 aa17.27■□□□□ 0.36
NEIL1-213ENST00000567393 WDR63Q8IWG1 891 aa17.27■□□□□ 0.36
NEIL1-213ENST00000567393 MYL6BP14649 208 aa17.26■□□□□ 0.35
NEIL1-213ENST00000567393 HDGFL1Q5TGJ6 251 aa17.26■□□□□ 0.35
NEIL1-213ENST00000567393 DUSP27Q5VZP5 1158 aa17.26■□□□□ 0.35
NEIL1-213ENST00000567393 KIF6Q6ZMV9 814 aa17.26■□□□□ 0.35
NEIL1-213ENST00000567393 TBC1D9BQ66K14 1250 aa17.25■□□□□ 0.35
NEIL1-213ENST00000567393 CHMP4AQ9BY43 222 aa17.25■□□□□ 0.35
NEIL1-213ENST00000567393 SALL2Q9Y467 1007 aaPredicted RBP17.25■□□□□ 0.35
NEIL1-213ENST00000567393 CARMIL3Q8ND23 1372 aa17.25■□□□□ 0.35
NEIL1-213ENST00000567393 ERVV-1B6SEH8 477 aa17.24■□□□□ 0.35
NEIL1-213ENST00000567393 SERPINB2P05120 415 aa17.24■□□□□ 0.35
NEIL1-213ENST00000567393 TGFB2P61812 414 aa17.24■□□□□ 0.35
NEIL1-213ENST00000567393 PDIA6Q15084 440 aa17.24■□□□□ 0.35
NEIL1-213ENST00000567393 BICDL1Q6ZP65 573 aa17.24■□□□□ 0.35
NEIL1-213ENST00000567393 DDX21Q9NR30 783 aaKnown RBP eCLIP17.24■□□□□ 0.35
NEIL1-213ENST00000567393 MAP3K15Q6ZN16 1313 aa17.23■□□□□ 0.35
NEIL1-213ENST00000567393 NECTIN2Q92692 538 aa17.23■□□□□ 0.35
NEIL1-213ENST00000567393 TSR2Q969E8 191 aaKnown RBP17.23■□□□□ 0.35
NEIL1-213ENST00000567393 SETDB2Q96T68 719 aa17.23■□□□□ 0.35
NEIL1-213ENST00000567393 DBF4Q9UBU7 674 aaPredicted RBP17.23■□□□□ 0.35
NEIL1-213ENST00000567393 PROSER3Q2NL68 480 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms