RNA–Protein interactions for RNA: ENST00000565986.1

PDXDC1-212, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-212ENST00000565986 PPP1R1BQ9UD71 204 aaPredicted RBP16.85■□□□□ 0.29
PDXDC1-212ENST00000565986 C4AP0C0L4 1744 aa16.84■□□□□ 0.29
PDXDC1-212ENST00000565986 TRAPPC3LQ5T215 181 aa16.84■□□□□ 0.29
PDXDC1-212ENST00000565986 BABAM1Q9NWV8 329 aa16.84■□□□□ 0.29
PDXDC1-212ENST00000565986 LAMB4A4D0S4 1761 aa16.84■□□□□ 0.29
PDXDC1-212ENST00000565986 CCER2I3L3R5 266 aa16.83■□□□□ 0.28
PDXDC1-212ENST00000565986 CALD1Q05682 793 aaKnown RBP16.83■□□□□ 0.28
PDXDC1-212ENST00000565986 MSL1Q68DK7 614 aa16.83■□□□□ 0.28
PDXDC1-212ENST00000565986 ZBTB1Q9Y2K1 713 aa16.83■□□□□ 0.28
PDXDC1-212ENST00000565986 COL24A1Q17RW2 1714 aa16.82■□□□□ 0.28
PDXDC1-212ENST00000565986 SOS1Q07889 1333 aaPredicted RBP16.82■□□□□ 0.28
PDXDC1-212ENST00000565986 POLD1P28340 1107 aa16.82■□□□□ 0.28
PDXDC1-212ENST00000565986 RFC4P35249 363 aa16.82■□□□□ 0.28
PDXDC1-212ENST00000565986 PTGER2P43116 358 aa16.82■□□□□ 0.28
PDXDC1-212ENST00000565986 EIF4A1P60842 406 aaKnown RBP16.82■□□□□ 0.28
PDXDC1-212ENST00000565986 ARHGEF1Q92888 912 aaKnown RBP16.82■□□□□ 0.28
PDXDC1-212ENST00000565986 LAS1LQ9Y4W2 734 aaKnown RBP16.82■□□□□ 0.28
PDXDC1-212ENST00000565986 COL15A1P39059 1388 aa16.81■□□□□ 0.28
PDXDC1-212ENST00000565986 CANXP27824 592 aaKnown RBP16.81■□□□□ 0.28
PDXDC1-212ENST00000565986 SENP3-EIF4A1A0A087X0R7 540 aa16.8■□□□□ 0.28
PDXDC1-212ENST00000565986 PRAMEF22A3QJZ6 481 aa16.8■□□□□ 0.28
PDXDC1-212ENST00000565986 SGIP1Q9BQI5 828 aa16.8■□□□□ 0.28
PDXDC1-212ENST00000565986 CHL1O00533 1208 aa16.79■□□□□ 0.28
PDXDC1-212ENST00000565986 CCDC27Q2M243 656 aa16.79■□□□□ 0.28
PDXDC1-212ENST00000565986 CFAP44Q96MT7 982 aa16.79■□□□□ 0.28
PDXDC1-212ENST00000565986 USP16Q9Y5T5 823 aa16.79■□□□□ 0.28
PDXDC1-212ENST00000565986 GIGYF1O75420 1035 aaPredicted RBP16.78■□□□□ 0.28
PDXDC1-212ENST00000565986 A1BGP04217 495 aa16.78■□□□□ 0.28
PDXDC1-212ENST00000565986 NPM2Q86SE8 214 aaKnown RBP16.78■□□□□ 0.28
PDXDC1-212ENST00000565986 ARXQ96QS3 562 aa16.78■□□□□ 0.28
PDXDC1-212ENST00000565986 IFT57Q9NWB7 429 aa16.78■□□□□ 0.28
PDXDC1-212ENST00000565986 ZNF330Q9Y3S2 320 aaPredicted RBP16.78■□□□□ 0.28
PDXDC1-212ENST00000565986 USP42Q9H9J4 1324 aaKnown RBP16.77■□□□□ 0.28
PDXDC1-212ENST00000565986 ZPR1O75312 459 aa16.77■□□□□ 0.28
PDXDC1-212ENST00000565986 IL6STP40189 918 aaPredicted RBP16.77■□□□□ 0.28
PDXDC1-212ENST00000565986 GNAI1P63096 354 aa16.77■□□□□ 0.28
PDXDC1-212ENST00000565986 NCBP3Q53F19 620 aaKnown RBP16.77■□□□□ 0.28
PDXDC1-212ENST00000565986 A0A087WZG4 1122 aa16.76■□□□□ 0.27
PDXDC1-212ENST00000565986 GYS1P13807 737 aa16.76■□□□□ 0.27
PDXDC1-212ENST00000565986 EIF5P55010 431 aaKnown RBP16.76■□□□□ 0.27
PDXDC1-212ENST00000565986 WWC1Q8IX03 1113 aa16.76■□□□□ 0.27
PDXDC1-212ENST00000565986 MIER1Q8N108 512 aa16.76■□□□□ 0.27
PDXDC1-212ENST00000565986 SRP68Q9UHB9 627 aaKnown RBP16.76■□□□□ 0.27
PDXDC1-212ENST00000565986 ZNF853P0CG23 659 aa16.75■□□□□ 0.27
PDXDC1-212ENST00000565986 NLGN1Q8N2Q7 840 aa16.75■□□□□ 0.27
PDXDC1-212ENST00000565986 NGEFQ8N5V2 710 aa16.75■□□□□ 0.27
PDXDC1-212ENST00000565986 MBIPQ9NS73 344 aa16.75■□□□□ 0.27
PDXDC1-212ENST00000565986 SALL2Q9Y467 1007 aaPredicted RBP16.75■□□□□ 0.27
PDXDC1-212ENST00000565986 SCN7AQ01118 1682 aa16.75■□□□□ 0.27
PDXDC1-212ENST00000565986 PIP4K2AP48426 406 aaPredicted RBP16.74■□□□□ 0.27
PDXDC1-212ENST00000565986 NARFQ9UHQ1 456 aa16.74■□□□□ 0.27
PDXDC1-212ENST00000565986 MMP10P09238 476 aa16.73■□□□□ 0.27
PDXDC1-212ENST00000565986 USPL1Q5W0Q7 1092 aa16.73■□□□□ 0.27
PDXDC1-212ENST00000565986 KLHL34Q8N239 644 aa16.73■□□□□ 0.27
PDXDC1-212ENST00000565986 IL16Q14005 1332 aa16.72■□□□□ 0.27
PDXDC1-212ENST00000565986 ERBB4Q15303 1308 aa16.72■□□□□ 0.27
PDXDC1-212ENST00000565986 KRT24Q2M2I5 525 aa16.72■□□□□ 0.27
PDXDC1-212ENST00000565986 FHDC1Q9C0D6 1143 aaPredicted RBP16.72■□□□□ 0.27
PDXDC1-212ENST00000565986 BCORQ6W2J9 1755 aa16.72■□□□□ 0.27
PDXDC1-212ENST00000565986 NBPF26B4DH59 902 aa16.71■□□□□ 0.27
PDXDC1-212ENST00000565986 HOXB7P09629 217 aa16.71■□□□□ 0.27
PDXDC1-212ENST00000565986 EIF2S2P20042 333 aaKnown RBP16.71■□□□□ 0.27
PDXDC1-212ENST00000565986 FKBP8Q14318 412 aa16.71■□□□□ 0.27
PDXDC1-212ENST00000565986 NBPF10Q6P3W6 841 aaKnown RBP16.71■□□□□ 0.27
PDXDC1-212ENST00000565986 DZIP3Q86Y13 1208 aaKnown RBP16.71■□□□□ 0.27
PDXDC1-212ENST00000565986 NBPF15Q8N660 670 aa16.71■□□□□ 0.27
PDXDC1-212ENST00000565986 TBC1D2BQ9UPU7 963 aa16.71■□□□□ 0.27
PDXDC1-212ENST00000565986 WDR63Q8IWG1 891 aa16.7■□□□□ 0.26
PDXDC1-212ENST00000565986 MYL6BP14649 208 aa16.69■□□□□ 0.26
PDXDC1-212ENST00000565986 DUSP27Q5VZP5 1158 aa16.69■□□□□ 0.26
PDXDC1-212ENST00000565986 TSR2Q969E8 191 aaKnown RBP16.69■□□□□ 0.26
PDXDC1-212ENST00000565986 PARP3Q9Y6F1 533 aa16.69■□□□□ 0.26
PDXDC1-212ENST00000565986 CAMTA2O94983 1202 aa16.68■□□□□ 0.26
PDXDC1-212ENST00000565986 HDGFL1Q5TGJ6 251 aa16.68■□□□□ 0.26
PDXDC1-212ENST00000565986 NECTIN2Q92692 538 aa16.68■□□□□ 0.26
PDXDC1-212ENST00000565986 SYT17Q9BSW7 474 aa16.68■□□□□ 0.26
PDXDC1-212ENST00000565986 BCL2L12Q9HB09 334 aa16.67■□□□□ 0.26
PDXDC1-212ENST00000565986 ZNF652Q9Y2D9 606 aa16.67■□□□□ 0.26
PDXDC1-212ENST00000565986 DDR1Q08345 913 aa16.66■□□□□ 0.26
PDXDC1-212ENST00000565986 NFIXQ14938 502 aa16.66■□□□□ 0.26
PDXDC1-212ENST00000565986 FANCIQ9NVI1 1328 aa16.66■□□□□ 0.26
PDXDC1-212ENST00000565986 C10orf71Q711Q0 1435 aa16.65■□□□□ 0.26
PDXDC1-212ENST00000565986 ELL2O00472 640 aaPredicted RBP16.65■□□□□ 0.26
PDXDC1-212ENST00000565986 KIF6Q6ZMV9 814 aa16.65■□□□□ 0.26
PDXDC1-212ENST00000565986 C8orf58Q8NAV2 365 aa16.65■□□□□ 0.26
PDXDC1-212ENST00000565986 DDX21Q9NR30 783 aaKnown RBP eCLIP16.65■□□□□ 0.26
PDXDC1-212ENST00000565986 CD2APQ9Y5K6 639 aa16.65■□□□□ 0.26
PDXDC1-212ENST00000565986 POLRMTO00411 1230 aaKnown RBP16.64■□□□□ 0.25
PDXDC1-212ENST00000565986 ANXA1P04083 346 aa16.64■□□□□ 0.25
PDXDC1-212ENST00000565986 TM4SF1P30408 202 aa16.64■□□□□ 0.25
PDXDC1-212ENST00000565986 PDIA6Q15084 440 aa16.64■□□□□ 0.25
PDXDC1-212ENST00000565986 PROSER3Q2NL68 480 aa16.64■□□□□ 0.25
PDXDC1-212ENST00000565986 TBC1D9BQ66K14 1250 aa16.64■□□□□ 0.25
PDXDC1-212ENST00000565986 BICDL1Q6ZP65 573 aa16.64■□□□□ 0.25
PDXDC1-212ENST00000565986 CHMP4AQ9BY43 222 aa16.64■□□□□ 0.25
PDXDC1-212ENST00000565986 MYH16Q9H6N6 1097 aa16.64■□□□□ 0.25
PDXDC1-212ENST00000565986 CHPF2Q9P2E5 772 aa16.64■□□□□ 0.25
PDXDC1-212ENST00000565986 DBF4Q9UBU7 674 aaPredicted RBP16.64■□□□□ 0.25
PDXDC1-212ENST00000565986 ZNF521Q96K83 1311 aa16.64■□□□□ 0.25
PDXDC1-212ENST00000565986 CARMIL3Q8ND23 1372 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms