RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 CUEDC1Q9NWM3 386 aaPredicted RBP8.29□□□□□ -1.08
PALB2-203ENST00000565038 C21orf2O43822 256 aa8.28□□□□□ -1.08
PALB2-203ENST00000565038 MSX1P28360 303 aa8.28□□□□□ -1.08
PALB2-203ENST00000565038 SH3PXD2AQ5TCZ1 1133 aa8.28□□□□□ -1.08
PALB2-203ENST00000565038 CHMP7Q8WUX9 453 aaPredicted RBP8.28□□□□□ -1.08
PALB2-203ENST00000565038 ZNF232Q9UNY5 417 aa8.28□□□□□ -1.08
PALB2-203ENST00000565038 ATAD2Q6PL18 1390 aa8.27□□□□□ -1.09
PALB2-203ENST00000565038 A0A1B0GTH6 734 aa8.27□□□□□ -1.09
PALB2-203ENST00000565038 PPP1R12BO60237 982 aaPredicted RBP8.27□□□□□ -1.09
PALB2-203ENST00000565038 NOS2P35228 1153 aa8.27□□□□□ -1.09
PALB2-203ENST00000565038 FAM69CQ0P6D2 419 aa8.27□□□□□ -1.09
PALB2-203ENST00000565038 NFX1Q12986 1120 aaKnown RBP8.27□□□□□ -1.09
PALB2-203ENST00000565038 TEAD4Q15561 434 aa8.27□□□□□ -1.09
PALB2-203ENST00000565038 SLC16A10Q8TF71 515 aa8.27□□□□□ -1.09
PALB2-203ENST00000565038 L3MBTL2Q969R5 705 aa8.27□□□□□ -1.09
PALB2-203ENST00000565038 PRIMPOLQ96LW4 560 aa8.27□□□□□ -1.09
PALB2-203ENST00000565038 ACIN1Q9UKV3 1341 aaKnown RBP8.27□□□□□ -1.09
PALB2-203ENST00000565038 SERTM1A2A2V5 107 aa8.26□□□□□ -1.09
PALB2-203ENST00000565038 CDC14CA4D256 554 aa8.26□□□□□ -1.09
PALB2-203ENST00000565038 F11P03951 625 aa8.26□□□□□ -1.09
PALB2-203ENST00000565038 TXLNAP40222 546 aa8.26□□□□□ -1.09
PALB2-203ENST00000565038 PSMA6P60900 246 aaKnown RBP8.26□□□□□ -1.09
PALB2-203ENST00000565038 NPAS3Q8IXF0 933 aa8.26□□□□□ -1.09
PALB2-203ENST00000565038 VWA5B2Q8N398 1253 aa8.26□□□□□ -1.09
PALB2-203ENST00000565038 RUBCNLQ9H714 662 aa8.26□□□□□ -1.09
PALB2-203ENST00000565038 ERBB4Q15303 1308 aa8.26□□□□□ -1.09
PALB2-203ENST00000565038 CARNS1A5YM72 827 aa8.25□□□□□ -1.09
PALB2-203ENST00000565038 WFS1O76024 890 aa8.25□□□□□ -1.09
PALB2-203ENST00000565038 DBN1Q16643 649 aa8.25□□□□□ -1.09
PALB2-203ENST00000565038 NBPF1Q3BBV0 1214 aa8.25□□□□□ -1.09
PALB2-203ENST00000565038 LCE2CQ5TA81 110 aa8.25□□□□□ -1.09
PALB2-203ENST00000565038 TREML4Q6UXN2 200 aa8.25□□□□□ -1.09
PALB2-203ENST00000565038 HCN4Q9Y3Q4 1203 aa8.25□□□□□ -1.09
PALB2-203ENST00000565038 EML1O00423 815 aa8.24□□□□□ -1.09
PALB2-203ENST00000565038 PRMT3O60678 531 aa8.24□□□□□ -1.09
PALB2-203ENST00000565038 CHMP3Q9Y3E7 222 aa8.24□□□□□ -1.09
PALB2-203ENST00000565038 CSB-PGBD3P0DP91 1061 aa8.23□□□□□ -1.09
PALB2-203ENST00000565038 ATP4AP20648 1035 aa8.23□□□□□ -1.09
PALB2-203ENST00000565038 IGFBP4P22692 258 aa8.23□□□□□ -1.09
PALB2-203ENST00000565038 WEE1P30291 646 aa8.23□□□□□ -1.09
PALB2-203ENST00000565038 SWI5Q1ZZU3 235 aa8.23□□□□□ -1.09
PALB2-203ENST00000565038 TRIM22Q8IYM9 498 aa8.23□□□□□ -1.09
PALB2-203ENST00000565038 ZNF837Q96EG3 531 aaPredicted RBP8.23□□□□□ -1.09
PALB2-203ENST00000565038 TATP17735 454 aaPredicted RBP8.22□□□□□ -1.09
PALB2-203ENST00000565038 ARSJQ5FYB0 599 aaPredicted RBP8.22□□□□□ -1.09
PALB2-203ENST00000565038 SV2AQ7L0J3 742 aa8.22□□□□□ -1.09
PALB2-203ENST00000565038 PGBD3Q8N328 593 aa8.22□□□□□ -1.09
PALB2-203ENST00000565038 GPR161Q8N6U8 529 aaKnown RBP8.22□□□□□ -1.09
PALB2-203ENST00000565038 NANOS1Q8WY41 292 aaKnown RBP8.22□□□□□ -1.09
PALB2-203ENST00000565038 IRF7Q92985 503 aa8.22□□□□□ -1.09
PALB2-203ENST00000565038 NGLY1Q96IV0 654 aa8.22□□□□□ -1.09
PALB2-203ENST00000565038 C2orf49Q9BVC5 232 aaPredicted RBP8.22□□□□□ -1.09
PALB2-203ENST00000565038 NUCKS1Q9H1E3 243 aaKnown RBP8.22□□□□□ -1.09
PALB2-203ENST00000565038 SLAIN2Q9P270 581 aa8.22□□□□□ -1.09
PALB2-203ENST00000565038 THBS1P07996 1170 aa8.21□□□□□ -1.1
PALB2-203ENST00000565038 BICDL1Q6ZP65 573 aa8.21□□□□□ -1.1
PALB2-203ENST00000565038 GTPBP3Q969Y2 492 aaKnown RBP8.21□□□□□ -1.1
PALB2-203ENST00000565038 PHACTR1Q9C0D0 580 aa8.21□□□□□ -1.1
PALB2-203ENST00000565038 ZDHHC3Q9NYG2 299 aa8.21□□□□□ -1.1
PALB2-203ENST00000565038 TMEM88BA6NKF7 163 aa8.2□□□□□ -1.1
PALB2-203ENST00000565038 H7C1W4 665 aa8.2□□□□□ -1.1
PALB2-203ENST00000565038 GPR25O00155 361 aa8.2□□□□□ -1.1
PALB2-203ENST00000565038 OCLNQ16625 522 aa8.2□□□□□ -1.1
PALB2-203ENST00000565038 C1orf216Q8TAB5 229 aa8.2□□□□□ -1.1
PALB2-203ENST00000565038 KLRG1Q96E93 195 aa8.2□□□□□ -1.1
PALB2-203ENST00000565038 A0A1W2PNR3 127 aa8.19□□□□□ -1.1
PALB2-203ENST00000565038 VSIG8P0DPA2 414 aa8.19□□□□□ -1.1
PALB2-203ENST00000565038 GMPRP36959 345 aa8.19□□□□□ -1.1
PALB2-203ENST00000565038 HIRAP54198 1017 aaPredicted RBP8.19□□□□□ -1.1
PALB2-203ENST00000565038 FKBP5Q13451 457 aaPredicted RBP8.19□□□□□ -1.1
PALB2-203ENST00000565038 LCE2AQ5TA79 106 aaPredicted RBP8.19□□□□□ -1.1
PALB2-203ENST00000565038 POTEAQ6S8J7 498 aa8.19□□□□□ -1.1
PALB2-203ENST00000565038 ALDH16A1Q8IZ83 802 aa8.19□□□□□ -1.1
PALB2-203ENST00000565038 STAG2Q8N3U4 1231 aa8.19□□□□□ -1.1
PALB2-203ENST00000565038 CLP1Q92989 425 aaKnown RBP8.19□□□□□ -1.1
PALB2-203ENST00000565038 ZIC5Q96T25 663 aa8.19□□□□□ -1.1
PALB2-203ENST00000565038 CRISPLD1Q9H336 500 aa8.19□□□□□ -1.1
PALB2-203ENST00000565038 FOXO3O43524 673 aa8.18□□□□□ -1.1
PALB2-203ENST00000565038 EFHC2Q5JST6 749 aa8.18□□□□□ -1.1
PALB2-203ENST00000565038 RHPN1Q8TCX5 695 aa8.18□□□□□ -1.1
PALB2-203ENST00000565038 VTI1AQ96AJ9 217 aa8.18□□□□□ -1.1
PALB2-203ENST00000565038 MKNK1Q9BUB5 465 aa8.18□□□□□ -1.1
PALB2-203ENST00000565038 CXXC1Q9P0U4 656 aaPredicted RBP8.18□□□□□ -1.1
PALB2-203ENST00000565038 ATP2B4P23634 1241 aa8.17□□□□□ -1.1
PALB2-203ENST00000565038 C1orf53Q5VUE5 145 aa8.17□□□□□ -1.1
PALB2-203ENST00000565038 LRRC69Q6ZNQ3 347 aa8.17□□□□□ -1.1
PALB2-203ENST00000565038 RETREG2Q8NC44 543 aa8.17□□□□□ -1.1
PALB2-203ENST00000565038 C7orf43Q8WVR3 580 aa8.17□□□□□ -1.1
PALB2-203ENST00000565038 GMCL1Q96IK5 515 aa8.17□□□□□ -1.1
PALB2-203ENST00000565038 UBAP2LQ14157 1087 aaKnown RBP8.16□□□□□ -1.1
PALB2-203ENST00000565038 FOXR1Q6PIV2 292 aa8.16□□□□□ -1.1
PALB2-203ENST00000565038 CAPN12Q6ZSI9 719 aa8.16□□□□□ -1.1
PALB2-203ENST00000565038 COL25A1Q9BXS0 654 aaPredicted RBP8.16□□□□□ -1.1
PALB2-203ENST00000565038 GJA3Q9Y6H8 435 aa8.16□□□□□ -1.1
PALB2-203ENST00000565038 SCNN1AP37088 669 aa8.15□□□□□ -1.1
PALB2-203ENST00000565038 LBRQ14739 615 aaKnown RBP8.15□□□□□ -1.1
PALB2-203ENST00000565038 RNFT1Q5M7Z0 435 aa8.15□□□□□ -1.1
PALB2-203ENST00000565038 HSH2DQ96JZ2 352 aa8.15□□□□□ -1.1
PALB2-203ENST00000565038 ZCCHC2Q9C0B9 1178 aaKnown RBP8.15□□□□□ -1.1
PALB2-203ENST00000565038 NEUROD4Q9HD90 331 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms