RNA–Protein interactions for RNA: ENST00000564354.1

AP000842.3-201, humanhuman

TSL 3 BASIC

Gene AP000842.3, Length 808 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000842.3-201ENST00000564354 GTF2E1P29083 439 aaPredicted RBP11.21□□□□□ -0.61
AP000842.3-201ENST00000564354 CDCA7Q9BWT1 371 aaPredicted RBP11.21□□□□□ -0.61
AP000842.3-201ENST00000564354 CRISPLD1Q9H336 500 aa11.21□□□□□ -0.61
AP000842.3-201ENST00000564354 C1QTNF9BB2RNN3 333 aa11.2□□□□□ -0.62
AP000842.3-201ENST00000564354 EPXP11678 715 aa11.2□□□□□ -0.62
AP000842.3-201ENST00000564354 CTBSQ01459 385 aa11.2□□□□□ -0.62
AP000842.3-201ENST00000564354 BTBD6Q96KE9 485 aa11.2□□□□□ -0.62
AP000842.3-201ENST00000564354 CCDC85AQ96PX6 553 aaPredicted RBP11.2□□□□□ -0.62
AP000842.3-201ENST00000564354 CFTRP13569 1480 aa11.19□□□□□ -0.62
AP000842.3-201ENST00000564354 DGKGP49619 791 aa11.19□□□□□ -0.62
AP000842.3-201ENST00000564354 ESCO1Q5FWF5 840 aa11.19□□□□□ -0.62
AP000842.3-201ENST00000564354 CD163Q86VB7 1156 aa11.19□□□□□ -0.62
AP000842.3-201ENST00000564354 PRM3Q9NNZ6 103 aa11.19□□□□□ -0.62
AP000842.3-201ENST00000564354 URB2Q14146 1524 aaKnown RBP11.19□□□□□ -0.62
AP000842.3-201ENST00000564354 ARAFP10398 606 aa11.18□□□□□ -0.62
AP000842.3-201ENST00000564354 RHBDD1Q8TEB9 315 aa11.18□□□□□ -0.62
AP000842.3-201ENST00000564354 CEP126Q9P2H0 1117 aa11.18□□□□□ -0.62
AP000842.3-201ENST00000564354 RIMBP3CA6NJZ7 1639 aa11.17□□□□□ -0.62
AP000842.3-201ENST00000564354 RIMBP3BA6NNM3 1639 aa11.17□□□□□ -0.62
AP000842.3-201ENST00000564354 RIMBP3Q9UFD9 1639 aa11.17□□□□□ -0.62
AP000842.3-201ENST00000564354 PPARGC1BQ86YN6 1023 aaKnown RBP11.17□□□□□ -0.62
AP000842.3-201ENST00000564354 RNF135Q8IUD6 432 aa11.16□□□□□ -0.62
AP000842.3-201ENST00000564354 NOP53Q9NZM5 478 aaKnown RBP11.16□□□□□ -0.62
AP000842.3-201ENST00000564354 TBC1D2BQ9UPU7 963 aa11.16□□□□□ -0.62
AP000842.3-201ENST00000564354 CHRNA4P43681 627 aa11.15□□□□□ -0.62
AP000842.3-201ENST00000564354 DNAAF2Q9NVR5 837 aaKnown RBP11.15□□□□□ -0.62
AP000842.3-201ENST00000564354 ITGB7P26010 798 aa11.14□□□□□ -0.63
AP000842.3-201ENST00000564354 ETNK1Q9HBU6 452 aa11.14□□□□□ -0.63
AP000842.3-201ENST00000564354 FIGNL1Q6PIW4 674 aa11.13□□□□□ -0.63
AP000842.3-201ENST00000564354 PSMG3-AS1Q96PY0 264 aa11.13□□□□□ -0.63
AP000842.3-201ENST00000564354 NEURL1BA8MQ27 555 aa11.12□□□□□ -0.63
AP000842.3-201ENST00000564354 CYB5RLQ6IPT4 315 aa11.12□□□□□ -0.63
AP000842.3-201ENST00000564354 PCDHGC4Q9Y5F7 938 aa11.12□□□□□ -0.63
AP000842.3-201ENST00000564354 TOP2AP11388 1531 aaKnown RBP11.12□□□□□ -0.63
AP000842.3-201ENST00000564354 TLR1Q15399 786 aa11.11□□□□□ -0.63
AP000842.3-201ENST00000564354 ZCCHC2Q9C0B9 1178 aaKnown RBP11.11□□□□□ -0.63
AP000842.3-201ENST00000564354 RSF1Q96T23 1441 aaPredicted RBP11.1□□□□□ -0.63
AP000842.3-201ENST00000564354 TBC1D9Q6ZT07 1266 aa11.1□□□□□ -0.63
AP000842.3-201ENST00000564354 CHSY3Q70JA7 882 aa11.1□□□□□ -0.63
AP000842.3-201ENST00000564354 NLRP8Q86W28 1048 aa11.1□□□□□ -0.63
AP000842.3-201ENST00000564354 C1orf216Q8TAB5 229 aa11.1□□□□□ -0.63
AP000842.3-201ENST00000564354 ARHGEF11O15085 1522 aa11.09□□□□□ -0.63
AP000842.3-201ENST00000564354 ZNF608Q9ULD9 1512 aaPredicted RBP11.09□□□□□ -0.63
AP000842.3-201ENST00000564354 IFT140Q96RY7 1462 aa11.09□□□□□ -0.63
AP000842.3-201ENST00000564354 STAU1O95793 577 aaKnown RBP11.09□□□□□ -0.63
AP000842.3-201ENST00000564354 ATP4AP20648 1035 aa11.09□□□□□ -0.63
AP000842.3-201ENST00000564354 EIF4G2P78344 907 aaKnown RBP eCLIP11.09□□□□□ -0.63
AP000842.3-201ENST00000564354 USP4Q13107 963 aa11.09□□□□□ -0.63
AP000842.3-201ENST00000564354 PHTF2Q8N3S3 785 aa11.09□□□□□ -0.63
AP000842.3-201ENST00000564354 PRDM2Q13029 1718 aa11.09□□□□□ -0.63
AP000842.3-201ENST00000564354 PLA2G4AP47712 749 aa11.08□□□□□ -0.64
AP000842.3-201ENST00000564354 TSGA10IPQ3SY00 556 aa11.08□□□□□ -0.64
AP000842.3-201ENST00000564354 FAM182BQ5T319 152 aa11.08□□□□□ -0.64
AP000842.3-201ENST00000564354 GDPD2Q9HCC8 539 aa11.08□□□□□ -0.64
AP000842.3-201ENST00000564354 AVENQ9NQS1 362 aaPredicted RBP11.08□□□□□ -0.64
AP000842.3-201ENST00000564354 KLF15Q9UIH9 416 aa11.08□□□□□ -0.64
AP000842.3-201ENST00000564354 HCN2Q9UL51 889 aa11.08□□□□□ -0.64
AP000842.3-201ENST00000564354 ADH6P28332 368 aa11.07□□□□□ -0.64
AP000842.3-201ENST00000564354 ABL2P42684 1182 aa11.07□□□□□ -0.64
AP000842.3-201ENST00000564354 KRTAP9-2Q9BYQ4 174 aa11.07□□□□□ -0.64
AP000842.3-201ENST00000564354 DOLKQ9UPQ8 538 aa11.07□□□□□ -0.64
AP000842.3-201ENST00000564354 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.06□□□□□ -0.64
AP000842.3-201ENST00000564354 ATXN7O15265 892 aaPredicted RBP11.05□□□□□ -0.64
AP000842.3-201ENST00000564354 TNP2Q05952 138 aa11.05□□□□□ -0.64
AP000842.3-201ENST00000564354 VAC14Q08AM6 782 aa11.05□□□□□ -0.64
AP000842.3-201ENST00000564354 IRF5Q13568 498 aa11.05□□□□□ -0.64
AP000842.3-201ENST00000564354 DOC2BQ14184 412 aa11.05□□□□□ -0.64
AP000842.3-201ENST00000564354 SLFNL1Q499Z3 407 aa11.05□□□□□ -0.64
AP000842.3-201ENST00000564354 FCHSD1Q86WN1 690 aa11.05□□□□□ -0.64
AP000842.3-201ENST00000564354 SEMA6BQ9H3T3 888 aa11.05□□□□□ -0.64
AP000842.3-201ENST00000564354 CHIC2Q9UKJ5 165 aa11.05□□□□□ -0.64
AP000842.3-201ENST00000564354 MAPTP10636 758 aaKnown RBP11.04□□□□□ -0.64
AP000842.3-201ENST00000564354 SCNN1DP51172 638 aa11.04□□□□□ -0.64
AP000842.3-201ENST00000564354 TRIM11Q96F44 468 aa11.04□□□□□ -0.64
AP000842.3-201ENST00000564354 TOPBP1Q92547 1522 aa11.04□□□□□ -0.64
AP000842.3-201ENST00000564354 NIFKQ9BYG3 293 aaKnown RBP11.03□□□□□ -0.64
AP000842.3-201ENST00000564354 INHAP05111 366 aa11.02□□□□□ -0.65
AP000842.3-201ENST00000564354 SIRT1Q96EB6 747 aa11.02□□□□□ -0.65
AP000842.3-201ENST00000564354 EIF4G3O43432 1585 aaKnown RBP11.02□□□□□ -0.65
AP000842.3-201ENST00000564354 ABCC8Q09428 1581 aa11.02□□□□□ -0.65
AP000842.3-201ENST00000564354 CCDC88BA6NC98 1476 aa11.01□□□□□ -0.65
AP000842.3-201ENST00000564354 A0A1W2PNR3 127 aa11.01□□□□□ -0.65
AP000842.3-201ENST00000564354 DCDC2BA2VCK2 349 aa11.01□□□□□ -0.65
AP000842.3-201ENST00000564354 CD33P20138 364 aa11.01□□□□□ -0.65
AP000842.3-201ENST00000564354 GATA4P43694 442 aa11.01□□□□□ -0.65
AP000842.3-201ENST00000564354 ZNF295-AS1Q8N0V1 137 aa11.01□□□□□ -0.65
AP000842.3-201ENST00000564354 CHD1O14646 1710 aa11.01□□□□□ -0.65
AP000842.3-201ENST00000564354 KRTAP9-6A0A140TA67 174 aa11□□□□□ -0.65
AP000842.3-201ENST00000564354 SPATA31C1P0DKV0 1188 aa11□□□□□ -0.65
AP000842.3-201ENST00000564354 GDF10P55107 478 aa11□□□□□ -0.65
AP000842.3-201ENST00000564354 OXLD1Q5BKU9 147 aa11□□□□□ -0.65
AP000842.3-201ENST00000564354 ZMYM1Q5SVZ6 1142 aa11□□□□□ -0.65
AP000842.3-201ENST00000564354 AQRO60306 1485 aaKnown RBP eCLIP11□□□□□ -0.65
AP000842.3-201ENST00000564354 FAM157BP0CG42 384 aa10.99□□□□□ -0.65
AP000842.3-201ENST00000564354 ZNF468Q5VIY5 522 aaPredicted RBP10.99□□□□□ -0.65
AP000842.3-201ENST00000564354 AIDAQ96BJ3 306 aa10.99□□□□□ -0.65
AP000842.3-201ENST00000564354 PLVAPQ9BX97 442 aa10.99□□□□□ -0.65
AP000842.3-201ENST00000564354 KHNYNO15037 678 aaKnown RBP10.98□□□□□ -0.65
AP000842.3-201ENST00000564354 SMTNP53814 917 aa10.98□□□□□ -0.65
AP000842.3-201ENST00000564354 SEMA3FQ13275 785 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms