RNA–Protein interactions for RNA: ENST00000562055.1

CASKIN1-202, Transcript of CASK interacting protein 1, humanhuman

TSL 2

Gene CASKIN1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1-202ENST00000562055 RPS6KA4O75676 772 aa20.67■□□□□ 0.9
CASKIN1-202ENST00000562055 COL23A1Q86Y22 540 aaPredicted RBP20.67■□□□□ 0.9
CASKIN1-202ENST00000562055 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.66■□□□□ 0.9
CASKIN1-202ENST00000562055 GIGYF1O75420 1035 aaPredicted RBP20.66■□□□□ 0.9
CASKIN1-202ENST00000562055 ADRA2BP18089 450 aa20.66■□□□□ 0.9
CASKIN1-202ENST00000562055 RTCBQ9Y3I0 505 aaKnown RBP20.66■□□□□ 0.9
CASKIN1-202ENST00000562055 IL16Q14005 1332 aa20.65■□□□□ 0.9
CASKIN1-202ENST00000562055 GNAI1P63096 354 aa20.65■□□□□ 0.9
CASKIN1-202ENST00000562055 SENP3-EIF4A1A0A087X0R7 540 aa20.64■□□□□ 0.89
CASKIN1-202ENST00000562055 PRAMEF22A3QJZ6 481 aa20.64■□□□□ 0.89
CASKIN1-202ENST00000562055 USP16Q9Y5T5 823 aa20.64■□□□□ 0.89
CASKIN1-202ENST00000562055 SOS1Q07889 1333 aaPredicted RBP20.63■□□□□ 0.89
CASKIN1-202ENST00000562055 SMIM5Q71RC9 77 aa20.63■□□□□ 0.89
CASKIN1-202ENST00000562055 WDR63Q8IWG1 891 aa20.63■□□□□ 0.89
CASKIN1-202ENST00000562055 MTFR1LQ9H019 292 aa20.63■□□□□ 0.89
CASKIN1-202ENST00000562055 ZBTB1Q9Y2K1 713 aa20.63■□□□□ 0.89
CASKIN1-202ENST00000562055 LAS1LQ9Y4W2 734 aaKnown RBP20.63■□□□□ 0.89
CASKIN1-202ENST00000562055 LAMB4A4D0S4 1761 aa20.63■□□□□ 0.89
CASKIN1-202ENST00000562055 COL24A1Q17RW2 1714 aa20.63■□□□□ 0.89
CASKIN1-202ENST00000562055 LRP5O75197 1615 aa20.63■□□□□ 0.89
CASKIN1-202ENST00000562055 PHF14O94880 888 aa20.62■□□□□ 0.89
CASKIN1-202ENST00000562055 TRAPPC3LQ5T215 181 aa20.62■□□□□ 0.89
CASKIN1-202ENST00000562055 MBIPQ9NS73 344 aa20.62■□□□□ 0.89
CASKIN1-202ENST00000562055 ZNF521Q96K83 1311 aa20.61■□□□□ 0.89
CASKIN1-202ENST00000562055 ZBTB7AO95365 584 aa20.61■□□□□ 0.89
CASKIN1-202ENST00000562055 ARHGEF1Q92888 912 aaKnown RBP20.61■□□□□ 0.89
CASKIN1-202ENST00000562055 EIF5P55010 431 aaKnown RBP20.6■□□□□ 0.89
CASKIN1-202ENST00000562055 SPON1Q9HCB6 807 aa20.6■□□□□ 0.89
CASKIN1-202ENST00000562055 C4AP0C0L4 1744 aa20.59■□□□□ 0.89
CASKIN1-202ENST00000562055 A1BGP04217 495 aa20.59■□□□□ 0.89
CASKIN1-202ENST00000562055 IL6STP40189 918 aaPredicted RBP20.59■□□□□ 0.89
CASKIN1-202ENST00000562055 SGIP1Q9BQI5 828 aa20.59■□□□□ 0.89
CASKIN1-202ENST00000562055 SALL2Q9Y467 1007 aaPredicted RBP20.59■□□□□ 0.89
CASKIN1-202ENST00000562055 MSH5O43196 834 aa20.58■□□□□ 0.89
CASKIN1-202ENST00000562055 HOXB7P09629 217 aa20.58■□□□□ 0.89
CASKIN1-202ENST00000562055 PTGER2P43116 358 aa20.58■□□□□ 0.89
CASKIN1-202ENST00000562055 COL15A1P39059 1388 aa20.58■□□□□ 0.88
CASKIN1-202ENST00000562055 CANXP27824 592 aaKnown RBP20.57■□□□□ 0.88
CASKIN1-202ENST00000562055 ATF5Q9Y2D1 282 aaPredicted RBP20.57■□□□□ 0.88
CASKIN1-202ENST00000562055 NBPF26B4DH59 902 aa20.56■□□□□ 0.88
CASKIN1-202ENST00000562055 RFC4P35249 363 aa20.56■□□□□ 0.88
CASKIN1-202ENST00000562055 KRT24Q2M2I5 525 aa20.56■□□□□ 0.88
CASKIN1-202ENST00000562055 NBPF10Q6P3W6 841 aaKnown RBP20.56■□□□□ 0.88
CASKIN1-202ENST00000562055 NBPF15Q8N660 670 aa20.56■□□□□ 0.88
CASKIN1-202ENST00000562055 ERBB4Q15303 1308 aa20.55■□□□□ 0.88
CASKIN1-202ENST00000562055 USP42Q9H9J4 1324 aaKnown RBP20.55■□□□□ 0.88
CASKIN1-202ENST00000562055 A0A087WZG4 1122 aa20.54■□□□□ 0.88
CASKIN1-202ENST00000562055 GYS1P13807 737 aa20.54■□□□□ 0.88
CASKIN1-202ENST00000562055 NARFQ9UHQ1 456 aa20.54■□□□□ 0.88
CASKIN1-202ENST00000562055 TSR2Q969E8 191 aaKnown RBP20.53■□□□□ 0.88
CASKIN1-202ENST00000562055 SPINK5Q9NQ38 1064 aaPredicted RBP20.53■□□□□ 0.88
CASKIN1-202ENST00000562055 DUSP27Q5VZP5 1158 aa20.52■□□□□ 0.88
CASKIN1-202ENST00000562055 NLGN1Q8N2Q7 840 aa20.52■□□□□ 0.88
CASKIN1-202ENST00000562055 C8orf58Q8NAV2 365 aa20.52■□□□□ 0.88
CASKIN1-202ENST00000562055 FANCIQ9NVI1 1328 aa20.52■□□□□ 0.87
CASKIN1-202ENST00000562055 ZPR1O75312 459 aa20.51■□□□□ 0.87
CASKIN1-202ENST00000562055 PIP4K2AP48426 406 aaPredicted RBP20.51■□□□□ 0.87
CASKIN1-202ENST00000562055 PDIA6Q15084 440 aa20.51■□□□□ 0.87
CASKIN1-202ENST00000562055 SRP68Q9UHB9 627 aaKnown RBP20.51■□□□□ 0.87
CASKIN1-202ENST00000562055 EIF2S2P20042 333 aaKnown RBP20.5■□□□□ 0.87
CASKIN1-202ENST00000562055 POLD1P28340 1107 aa20.5■□□□□ 0.87
CASKIN1-202ENST00000562055 MSL1Q68DK7 614 aa20.5■□□□□ 0.87
CASKIN1-202ENST00000562055 LRP10Q7Z4F1 713 aa20.5■□□□□ 0.87
CASKIN1-202ENST00000562055 MYH16Q9H6N6 1097 aa20.5■□□□□ 0.87
CASKIN1-202ENST00000562055 SCN7AQ01118 1682 aa20.49■□□□□ 0.87
CASKIN1-202ENST00000562055 RGL2O15211 777 aa20.49■□□□□ 0.87
CASKIN1-202ENST00000562055 GOLGA2Q08379 1002 aa20.49■□□□□ 0.87
CASKIN1-202ENST00000562055 HDGFL1Q5TGJ6 251 aa20.49■□□□□ 0.87
CASKIN1-202ENST00000562055 USPL1Q5W0Q7 1092 aa20.49■□□□□ 0.87
CASKIN1-202ENST00000562055 NPM2Q86SE8 214 aaKnown RBP20.49■□□□□ 0.87
CASKIN1-202ENST00000562055 CHMP4AQ9BY43 222 aa20.48■□□□□ 0.87
CASKIN1-202ENST00000562055 BCL2L12Q9HB09 334 aa20.48■□□□□ 0.87
CASKIN1-202ENST00000562055 TBC1D2BQ9UPU7 963 aa20.48■□□□□ 0.87
CASKIN1-202ENST00000562055 GOLGB1Q14789 3259 aaKnown RBP20.47■□□□□ 0.87
CASKIN1-202ENST00000562055 CAMTA2O94983 1202 aa20.47■□□□□ 0.87
CASKIN1-202ENST00000562055 FKBP8Q14318 412 aa20.47■□□□□ 0.87
CASKIN1-202ENST00000562055 DZIP3Q86Y13 1208 aaKnown RBP20.47■□□□□ 0.87
CASKIN1-202ENST00000562055 TSPYL6Q8N831 410 aa20.47■□□□□ 0.87
CASKIN1-202ENST00000562055 ARXQ96QS3 562 aa20.47■□□□□ 0.87
CASKIN1-202ENST00000562055 DDX21Q9NR30 783 aaKnown RBP eCLIP20.47■□□□□ 0.87
CASKIN1-202ENST00000562055 ZNF330Q9Y3S2 320 aaPredicted RBP20.47■□□□□ 0.87
CASKIN1-202ENST00000562055 BCORQ6W2J9 1755 aa20.46■□□□□ 0.87
CASKIN1-202ENST00000562055 E9PSI1 815 aa20.46■□□□□ 0.87
CASKIN1-202ENST00000562055 ELL2O00472 640 aaPredicted RBP20.46■□□□□ 0.87
CASKIN1-202ENST00000562055 PROSER3Q2NL68 480 aa20.46■□□□□ 0.87
CASKIN1-202ENST00000562055 DBF4Q9UBU7 674 aaPredicted RBP20.46■□□□□ 0.87
CASKIN1-202ENST00000562055 MMP10P09238 476 aa20.45■□□□□ 0.86
CASKIN1-202ENST00000562055 MYL6BP14649 208 aa20.45■□□□□ 0.86
CASKIN1-202ENST00000562055 TM4SF1P30408 202 aa20.45■□□□□ 0.86
CASKIN1-202ENST00000562055 SLFN5Q08AF3 891 aa20.45■□□□□ 0.86
CASKIN1-202ENST00000562055 NECTIN2Q92692 538 aa20.45■□□□□ 0.86
CASKIN1-202ENST00000562055 CHPF2Q9P2E5 772 aa20.45■□□□□ 0.86
CASKIN1-202ENST00000562055 EXOSC9Q06265 439 aaKnown RBP20.44■□□□□ 0.86
CASKIN1-202ENST00000562055 TWISTNBQ3B726 338 aaPredicted RBP20.44■□□□□ 0.86
CASKIN1-202ENST00000562055 CLEC4GQ6UXB4 293 aa20.44■□□□□ 0.86
CASKIN1-202ENST00000562055 TRMT2AQ8IZ69 625 aaKnown RBP20.44■□□□□ 0.86
CASKIN1-202ENST00000562055 PPP1R1BQ9UD71 204 aaPredicted RBP20.44■□□□□ 0.86
CASKIN1-202ENST00000562055 ERVV-1B6SEH8 477 aa20.43■□□□□ 0.86
CASKIN1-202ENST00000562055 ANXA1P04083 346 aa20.42■□□□□ 0.86
CASKIN1-202ENST00000562055 HNRNPUQ00839 825 aaKnown RBP eCLIP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms