RNA–Protein interactions for RNA: ENST00000559573.3

FAM227B-208, Transcript of family with sequence similarity 227 member B, human

TSL 3

Gene FAM227B, Length 2,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM227B-208	ENST00000559573	INTS5	Q6P9B9	1019 aa	Known RBP	13.27	□□□□□ -0.28
FAM227B-208	ENST00000559573	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.27	□□□□□ -0.28
FAM227B-208	ENST00000559573	TSPYL4	Q9UJ04	414 aa		13.27	□□□□□ -0.28
FAM227B-208	ENST00000559573	TJP1	Q07157	1748 aa		13.27	□□□□□ -0.29
FAM227B-208	ENST00000559573	CYP19A1	P11511	503 aa	Predicted RBP	13.26	□□□□□ -0.29
FAM227B-208	ENST00000559573	EIF2S2	P20042	333 aa	Known RBP	13.26	□□□□□ -0.29
FAM227B-208	ENST00000559573	PRKCSH	P14314	528 aa	Predicted RBP	13.25	□□□□□ -0.29
FAM227B-208	ENST00000559573	ARHGEF1	Q92888	912 aa	Known RBP	13.25	□□□□□ -0.29
FAM227B-208	ENST00000559573	UBR3	Q6ZT12	1888 aa		13.25	□□□□□ -0.29
FAM227B-208	ENST00000559573	PNN	Q9H307	717 aa	Known RBP	13.25	□□□□□ -0.29
FAM227B-208	ENST00000559573	TBC1D2B	Q9UPU7	963 aa		13.24	□□□□□ -0.29
FAM227B-208	ENST00000559573	MYL6B	P14649	208 aa		13.24	□□□□□ -0.29
FAM227B-208	ENST00000559573	FMNL2	Q96PY5	1086 aa		13.24	□□□□□ -0.29
FAM227B-208	ENST00000559573	HEG1	Q9ULI3	1381 aa		13.24	□□□□□ -0.29
FAM227B-208	ENST00000559573	UBR2	Q8IWV8	1755 aa		13.23	□□□□□ -0.29
FAM227B-208	ENST00000559573	COL5A3	P25940	1745 aa	Predicted RBP	13.23	□□□□□ -0.29
FAM227B-208	ENST00000559573	PTGER2	P43116	358 aa		13.23	□□□□□ -0.29
FAM227B-208	ENST00000559573	EIF4A1	P60842	406 aa	Known RBP	13.23	□□□□□ -0.29
FAM227B-208	ENST00000559573	WWC1	Q8IX03	1113 aa		13.23	□□□□□ -0.29
FAM227B-208	ENST00000559573	CCDC24	Q8N4L8	307 aa		13.23	□□□□□ -0.29
FAM227B-208	ENST00000559573	MBIP	Q9NS73	344 aa		13.23	□□□□□ -0.29
FAM227B-208	ENST00000559573	PROSER3	Q2NL68	480 aa		13.23	□□□□□ -0.29
FAM227B-208	ENST00000559573	RTCB	Q9Y3I0	505 aa	Known RBP	13.23	□□□□□ -0.29
FAM227B-208	ENST00000559573	CASZ1	Q86V15	1759 aa		13.23	□□□□□ -0.29
FAM227B-208	ENST00000559573	NBPF26	B4DH59	902 aa		13.22	□□□□□ -0.29
FAM227B-208	ENST00000559573	NBPF10	Q6P3W6	841 aa	Known RBP	13.22	□□□□□ -0.29
FAM227B-208	ENST00000559573	BICDL1	Q6ZP65	573 aa		13.22	□□□□□ -0.29
FAM227B-208	ENST00000559573	NBPF15	Q8N660	670 aa		13.22	□□□□□ -0.29
FAM227B-208	ENST00000559573	TSPYL6	Q8N831	410 aa		13.22	□□□□□ -0.29
FAM227B-208	ENST00000559573	CCDC87	Q9NVE4	849 aa		13.22	□□□□□ -0.29
FAM227B-208	ENST00000559573	PLEKHG2	Q9H7P9	1386 aa		13.21	□□□□□ -0.29
FAM227B-208	ENST00000559573	HTATSF1	O43719	755 aa	Known RBP	13.21	□□□□□ -0.29
FAM227B-208	ENST00000559573	GIGYF1	O75420	1035 aa	Predicted RBP	13.21	□□□□□ -0.29
FAM227B-208	ENST00000559573	FKBP8	Q14318	412 aa		13.21	□□□□□ -0.29
FAM227B-208	ENST00000559573	TRAPPC3L	Q5T215	181 aa		13.21	□□□□□ -0.29
FAM227B-208	ENST00000559573	USPL1	Q5W0Q7	1092 aa		13.21	□□□□□ -0.29
FAM227B-208	ENST00000559573	CDCA7L	Q96GN5	454 aa		13.21	□□□□□ -0.29
FAM227B-208	ENST00000559573	C8orf58	Q8NAV2	365 aa		13.2	□□□□□ -0.3
FAM227B-208	ENST00000559573	SPON1	Q9HCB6	807 aa		13.2	□□□□□ -0.3
FAM227B-208	ENST00000559573	RFC4	P35249	363 aa		13.2	□□□□□ -0.3
FAM227B-208	ENST00000559573	KDM3B	Q7LBC6	1761 aa		13.19	□□□□□ -0.3
FAM227B-208	ENST00000559573	CHL1	O00533	1208 aa		13.19	□□□□□ -0.3
FAM227B-208	ENST00000559573	RPS6KA4	O75676	772 aa		13.19	□□□□□ -0.3
FAM227B-208	ENST00000559573	SNRPA1	P09661	255 aa	Known RBP	13.19	□□□□□ -0.3
FAM227B-208	ENST00000559573	FAM177B	A6PVY3	158 aa		13.19	□□□□□ -0.3
FAM227B-208	ENST00000559573	C4A	P0C0L4	1744 aa		13.18	□□□□□ -0.3
FAM227B-208	ENST00000559573	GYS1	P13807	737 aa		13.18	□□□□□ -0.3
FAM227B-208	ENST00000559573	AIMP1	Q12904	312 aa	Known RBP	13.18	□□□□□ -0.3
FAM227B-208	ENST00000559573	SGIP1	Q9BQI5	828 aa		13.18	□□□□□ -0.3
FAM227B-208	ENST00000559573	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.18	□□□□□ -0.3
FAM227B-208	ENST00000559573	MTFR1L	Q9H019	292 aa		13.18	□□□□□ -0.3
FAM227B-208	ENST00000559573	STARD3NL	O95772	234 aa		13.17	□□□□□ -0.3
FAM227B-208	ENST00000559573	TTLL7	Q6ZT98	887 aa		13.17	□□□□□ -0.3
FAM227B-208	ENST00000559573	NLGN2	Q8NFZ4	835 aa		13.17	□□□□□ -0.3
FAM227B-208	ENST00000559573	CNTNAP4	Q9C0A0	1308 aa		13.17	□□□□□ -0.3
FAM227B-208	ENST00000559573	MMP10	P09238	476 aa		13.17	□□□□□ -0.3
FAM227B-208	ENST00000559573	LMOD3	Q0VAK6	560 aa		13.17	□□□□□ -0.3
FAM227B-208	ENST00000559573	CFAP44	Q96MT7	982 aa		13.17	□□□□□ -0.3
FAM227B-208	ENST00000559573	BCL2L12	Q9HB09	334 aa		13.17	□□□□□ -0.3
FAM227B-208	ENST00000559573	SOS1	Q07889	1333 aa	Predicted RBP	13.17	□□□□□ -0.3
FAM227B-208	ENST00000559573	COL15A1	P39059	1388 aa		13.17	□□□□□ -0.3
FAM227B-208	ENST00000559573	SSFA2	P28290	1259 aa		13.16	□□□□□ -0.3
FAM227B-208	ENST00000559573	ZNF853	P0CG23	659 aa		13.16	□□□□□ -0.3
FAM227B-208	ENST00000559573	HLF	Q16534	295 aa		13.16	□□□□□ -0.3
FAM227B-208	ENST00000559573	DUSP27	Q5VZP5	1158 aa		13.16	□□□□□ -0.3
FAM227B-208	ENST00000559573	ZBTB3	Q9H5J0	574 aa		13.16	□□□□□ -0.3
FAM227B-208	ENST00000559573	CCER2	I3L3R5	266 aa		13.15	□□□□□ -0.3
FAM227B-208	ENST00000559573	EIF5	P55010	431 aa	Known RBP	13.15	□□□□□ -0.3
FAM227B-208	ENST00000559573	RC3H1	Q5TC82	1133 aa	Known RBP	13.15	□□□□□ -0.3
FAM227B-208	ENST00000559573	VSIG10	Q8N0Z9	540 aa		13.15	□□□□□ -0.3
FAM227B-208	ENST00000559573	CHPF2	Q9P2E5	772 aa		13.15	□□□□□ -0.3
FAM227B-208	ENST00000559573	PDIA6	Q15084	440 aa		13.15	□□□□□ -0.31
FAM227B-208	ENST00000559573	ERICH6	Q7L0X2	663 aa		13.15	□□□□□ -0.31
FAM227B-208	ENST00000559573	USP42	Q9H9J4	1324 aa	Known RBP	13.14	□□□□□ -0.31
FAM227B-208	ENST00000559573	DDR1	Q08345	913 aa		13.14	□□□□□ -0.31
FAM227B-208	ENST00000559573	TBC1D9B	Q66K14	1250 aa		13.14	□□□□□ -0.31
FAM227B-208	ENST00000559573	FANCI	Q9NVI1	1328 aa		13.13	□□□□□ -0.31
FAM227B-208	ENST00000559573	ZPR1	O75312	459 aa		13.13	□□□□□ -0.31
FAM227B-208	ENST00000559573	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.13	□□□□□ -0.31
FAM227B-208	ENST00000559573	DZIP3	Q86Y13	1208 aa	Known RBP	13.13	□□□□□ -0.31
FAM227B-208	ENST00000559573	POTED	Q86YR6	584 aa		13.13	□□□□□ -0.31
FAM227B-208	ENST00000559573	PHAX	Q9H814	394 aa	Known RBP	13.13	□□□□□ -0.31
FAM227B-208	ENST00000559573	EXOSC9	Q06265	439 aa	Known RBP	13.13	□□□□□ -0.31
FAM227B-208	ENST00000559573	GPT	P24298	496 aa		13.12	□□□□□ -0.31
FAM227B-208	ENST00000559573	HDGFL1	Q5TGJ6	251 aa		13.12	□□□□□ -0.31
FAM227B-208	ENST00000559573	SYT17	Q9BSW7	474 aa		13.12	□□□□□ -0.31
FAM227B-208	ENST00000559573	IFT57	Q9NWB7	429 aa		13.12	□□□□□ -0.31
FAM227B-208	ENST00000559573	NFIX	Q14938	502 aa		13.12	□□□□□ -0.31
FAM227B-208	ENST00000559573	GNAI1	P63096	354 aa		13.11	□□□□□ -0.31
FAM227B-208	ENST00000559573	BCL2L13	Q9BXK5	485 aa		13.11	□□□□□ -0.31
FAM227B-208	ENST00000559573	ZNF831	Q5JPB2	1677 aa		13.11	□□□□□ -0.31
FAM227B-208	ENST00000559573	CAMTA2	O94983	1202 aa		13.11	□□□□□ -0.31
FAM227B-208	ENST00000559573	RTL5	Q5HYW3	569 aa	Predicted RBP	13.11	□□□□□ -0.31
FAM227B-208	ENST00000559573	COPS6	Q7L5N1	327 aa		13.11	□□□□□ -0.31
FAM227B-208	ENST00000559573	LRP10	Q7Z4F1	713 aa		13.11	□□□□□ -0.31
FAM227B-208	ENST00000559573	QSER1	Q2KHR3	1735 aa		13.1	□□□□□ -0.31
FAM227B-208	ENST00000559573	POLD1	P28340	1107 aa		13.1	□□□□□ -0.31
FAM227B-208	ENST00000559573	G2E3	Q7L622	706 aa		13.1	□□□□□ -0.31
FAM227B-208	ENST00000559573	SLC51A	Q86UW1	340 aa		13.1	□□□□□ -0.31
FAM227B-208	ENST00000559573	SYNE4	Q8N205	404 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms