RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 COL23A1Q86Y22 540 aaPredicted RBP15.7■□□□□ 0.1
CDK12-203ENST00000558240 CCDC87Q9NVE4 849 aa15.7■□□□□ 0.1
CDK12-203ENST00000558240 IFT57Q9NWB7 429 aa15.7■□□□□ 0.1
CDK12-203ENST00000558240 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.69■□□□□ 0.1
CDK12-203ENST00000558240 GNAI1P63096 354 aa15.69■□□□□ 0.1
CDK12-203ENST00000558240 TRAPPC3LQ5T215 181 aa15.69■□□□□ 0.1
CDK12-203ENST00000558240 AMIGO3Q86WK7 504 aa15.69■□□□□ 0.1
CDK12-203ENST00000558240 LAS1LQ9Y4W2 734 aaKnown RBP15.69■□□□□ 0.1
CDK12-203ENST00000558240 LAMB4A4D0S4 1761 aa15.69■□□□□ 0.1
CDK12-203ENST00000558240 GIGYF1O75420 1035 aaPredicted RBP15.68■□□□□ 0.1
CDK12-203ENST00000558240 MTFR1LQ9H019 292 aa15.68■□□□□ 0.1
CDK12-203ENST00000558240 USP16Q9Y5T5 823 aa15.68■□□□□ 0.1
CDK12-203ENST00000558240 COL24A1Q17RW2 1714 aa15.68■□□□□ 0.1
CDK12-203ENST00000558240 IL16Q14005 1332 aa15.68■□□□□ 0.1
CDK12-203ENST00000558240 SENP3-EIF4A1A0A087X0R7 540 aa15.67■□□□□ 0.1
CDK12-203ENST00000558240 PRAMEF22A3QJZ6 481 aa15.67■□□□□ 0.1
CDK12-203ENST00000558240 PHF14O94880 888 aa15.67■□□□□ 0.1
CDK12-203ENST00000558240 WDR63Q8IWG1 891 aa15.67■□□□□ 0.1
CDK12-203ENST00000558240 LRP5O75197 1615 aa15.66■□□□□ 0.1
CDK12-203ENST00000558240 MSH5O43196 834 aa15.66■□□□□ 0.1
CDK12-203ENST00000558240 ZBTB7AO95365 584 aa15.66■□□□□ 0.1
CDK12-203ENST00000558240 SMIM5Q71RC9 77 aa15.66■□□□□ 0.1
CDK12-203ENST00000558240 ARHGEF1Q92888 912 aaKnown RBP15.66■□□□□ 0.1
CDK12-203ENST00000558240 SPON1Q9HCB6 807 aa15.66■□□□□ 0.1
CDK12-203ENST00000558240 MBIPQ9NS73 344 aa15.66■□□□□ 0.1
CDK12-203ENST00000558240 ZBTB1Q9Y2K1 713 aa15.66■□□□□ 0.1
CDK12-203ENST00000558240 SALL2Q9Y467 1007 aaPredicted RBP15.66■□□□□ 0.1
CDK12-203ENST00000558240 SOS1Q07889 1333 aaPredicted RBP15.66■□□□□ 0.1
CDK12-203ENST00000558240 C4AP0C0L4 1744 aa15.65■□□□□ 0.1
CDK12-203ENST00000558240 A1BGP04217 495 aa15.64■□□□□ 0.09
CDK12-203ENST00000558240 CANXP27824 592 aaKnown RBP15.64■□□□□ 0.09
CDK12-203ENST00000558240 RFC4P35249 363 aa15.64■□□□□ 0.09
CDK12-203ENST00000558240 IL6STP40189 918 aaPredicted RBP15.64■□□□□ 0.09
CDK12-203ENST00000558240 EIF5P55010 431 aaKnown RBP15.64■□□□□ 0.09
CDK12-203ENST00000558240 ATF5Q9Y2D1 282 aaPredicted RBP15.64■□□□□ 0.09
CDK12-203ENST00000558240 A0A087WZG4 1122 aa15.62■□□□□ 0.09
CDK12-203ENST00000558240 HOXB7P09629 217 aa15.62■□□□□ 0.09
CDK12-203ENST00000558240 PTGER2P43116 358 aa15.62■□□□□ 0.09
CDK12-203ENST00000558240 ZNF521Q96K83 1311 aa15.62■□□□□ 0.09
CDK12-203ENST00000558240 COL15A1P39059 1388 aa15.62■□□□□ 0.09
CDK12-203ENST00000558240 NPM2Q86SE8 214 aaKnown RBP15.61■□□□□ 0.09
CDK12-203ENST00000558240 SGIP1Q9BQI5 828 aa15.61■□□□□ 0.09
CDK12-203ENST00000558240 ERBB4Q15303 1308 aa15.61■□□□□ 0.09
CDK12-203ENST00000558240 NBPF26B4DH59 902 aa15.6■□□□□ 0.09
CDK12-203ENST00000558240 ZPR1O75312 459 aa15.6■□□□□ 0.09
CDK12-203ENST00000558240 KRT24Q2M2I5 525 aa15.6■□□□□ 0.09
CDK12-203ENST00000558240 NBPF10Q6P3W6 841 aaKnown RBP15.6■□□□□ 0.09
CDK12-203ENST00000558240 NLGN1Q8N2Q7 840 aa15.6■□□□□ 0.09
CDK12-203ENST00000558240 NBPF15Q8N660 670 aa15.6■□□□□ 0.09
CDK12-203ENST00000558240 NARFQ9UHQ1 456 aa15.6■□□□□ 0.09
CDK12-203ENST00000558240 USP42Q9H9J4 1324 aaKnown RBP15.6■□□□□ 0.09
CDK12-203ENST00000558240 CACNA1FO60840 1977 aa15.59■□□□□ 0.09
CDK12-203ENST00000558240 GYS1P13807 737 aa15.59■□□□□ 0.09
CDK12-203ENST00000558240 EIF2S2P20042 333 aaKnown RBP15.59■□□□□ 0.09
CDK12-203ENST00000558240 POLD1P28340 1107 aa15.59■□□□□ 0.09
CDK12-203ENST00000558240 DUSP27Q5VZP5 1158 aa15.59■□□□□ 0.09
CDK12-203ENST00000558240 TSR2Q969E8 191 aaKnown RBP15.59■□□□□ 0.09
CDK12-203ENST00000558240 CHMP4AQ9BY43 222 aa15.58■□□□□ 0.08
CDK12-203ENST00000558240 SRP68Q9UHB9 627 aaKnown RBP15.58■□□□□ 0.08
CDK12-203ENST00000558240 PIP4K2AP48426 406 aaPredicted RBP15.57■□□□□ 0.08
CDK12-203ENST00000558240 GOLGA2Q08379 1002 aa15.57■□□□□ 0.08
CDK12-203ENST00000558240 USPL1Q5W0Q7 1092 aa15.57■□□□□ 0.08
CDK12-203ENST00000558240 MSL1Q68DK7 614 aa15.57■□□□□ 0.08
CDK12-203ENST00000558240 C8orf58Q8NAV2 365 aa15.57■□□□□ 0.08
CDK12-203ENST00000558240 MYH16Q9H6N6 1097 aa15.57■□□□□ 0.08
CDK12-203ENST00000558240 ZNF330Q9Y3S2 320 aaPredicted RBP15.57■□□□□ 0.08
CDK12-203ENST00000558240 FANCIQ9NVI1 1328 aa15.57■□□□□ 0.08
CDK12-203ENST00000558240 HDGFL1Q5TGJ6 251 aa15.56■□□□□ 0.08
CDK12-203ENST00000558240 ARXQ96QS3 562 aa15.56■□□□□ 0.08
CDK12-203ENST00000558240 SPINK5Q9NQ38 1064 aaPredicted RBP15.56■□□□□ 0.08
CDK12-203ENST00000558240 PPP1R1BQ9UD71 204 aaPredicted RBP15.56■□□□□ 0.08
CDK12-203ENST00000558240 TBC1D2BQ9UPU7 963 aa15.56■□□□□ 0.08
CDK12-203ENST00000558240 BCORQ6W2J9 1755 aa15.56■□□□□ 0.08
CDK12-203ENST00000558240 NUP98P52948 1817 aa15.55■□□□□ 0.08
CDK12-203ENST00000558240 SCN7AQ01118 1682 aa15.55■□□□□ 0.08
CDK12-203ENST00000558240 ELL2O00472 640 aaPredicted RBP15.55■□□□□ 0.08
CDK12-203ENST00000558240 RGL2O15211 777 aa15.55■□□□□ 0.08
CDK12-203ENST00000558240 FKBP8Q14318 412 aa15.55■□□□□ 0.08
CDK12-203ENST00000558240 PDIA6Q15084 440 aa15.55■□□□□ 0.08
CDK12-203ENST00000558240 DZIP3Q86Y13 1208 aaKnown RBP15.55■□□□□ 0.08
CDK12-203ENST00000558240 DDX21Q9NR30 783 aaKnown RBP eCLIP15.55■□□□□ 0.08
CDK12-203ENST00000558240 E9PSI1 815 aa15.54■□□□□ 0.08
CDK12-203ENST00000558240 CAMTA2O94983 1202 aa15.54■□□□□ 0.08
CDK12-203ENST00000558240 MYL6BP14649 208 aa15.54■□□□□ 0.08
CDK12-203ENST00000558240 LRP10Q7Z4F1 713 aa15.54■□□□□ 0.08
CDK12-203ENST00000558240 TSPYL6Q8N831 410 aa15.54■□□□□ 0.08
CDK12-203ENST00000558240 NECTIN2Q92692 538 aa15.54■□□□□ 0.08
CDK12-203ENST00000558240 BCL2L12Q9HB09 334 aa15.54■□□□□ 0.08
CDK12-203ENST00000558240 DBF4Q9UBU7 674 aaPredicted RBP15.54■□□□□ 0.08
CDK12-203ENST00000558240 MMP10P09238 476 aa15.53■□□□□ 0.08
CDK12-203ENST00000558240 TM4SF1P30408 202 aa15.53■□□□□ 0.08
CDK12-203ENST00000558240 SLFN5Q08AF3 891 aa15.53■□□□□ 0.08
CDK12-203ENST00000558240 TWISTNBQ3B726 338 aaPredicted RBP15.53■□□□□ 0.08
CDK12-203ENST00000558240 CLEC4GQ6UXB4 293 aa15.53■□□□□ 0.08
CDK12-203ENST00000558240 CHPF2Q9P2E5 772 aa15.53■□□□□ 0.08
CDK12-203ENST00000558240 ERVV-1B6SEH8 477 aa15.52■□□□□ 0.08
CDK12-203ENST00000558240 EXOSC9Q06265 439 aaKnown RBP15.52■□□□□ 0.08
CDK12-203ENST00000558240 PROSER3Q2NL68 480 aa15.52■□□□□ 0.08
CDK12-203ENST00000558240 CCDC30Q5VVM6 783 aa15.52■□□□□ 0.08
CDK12-203ENST00000558240 HYPKQ9NX55 129 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms