RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 SNRPA1P09661 255 aaKnown RBP27.29■■□□□ 1.96
SEC23A-213ENST00000557280 RC3H1Q5TC82 1133 aaKnown RBP27.29■■□□□ 1.96
SEC23A-213ENST00000557280 ZBTB1Q9Y2K1 713 aa27.29■■□□□ 1.96
SEC23A-213ENST00000557280 GIGYF1O75420 1035 aaPredicted RBP27.28■■□□□ 1.96
SEC23A-213ENST00000557280 GNAI1P63096 354 aa27.28■■□□□ 1.96
SEC23A-213ENST00000557280 TSR2Q969E8 191 aaKnown RBP27.28■■□□□ 1.96
SEC23A-213ENST00000557280 CCDC87Q9NVE4 849 aa27.28■■□□□ 1.96
SEC23A-213ENST00000557280 COL23A1Q86Y22 540 aaPredicted RBP27.27■■□□□ 1.96
SEC23A-213ENST00000557280 SPINK5Q9NQ38 1064 aaPredicted RBP27.27■■□□□ 1.96
SEC23A-213ENST00000557280 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.26■■□□□ 1.95
SEC23A-213ENST00000557280 IL16Q14005 1332 aa27.25■■□□□ 1.95
SEC23A-213ENST00000557280 STARD3NLO95772 234 aa27.25■■□□□ 1.95
SEC23A-213ENST00000557280 PIP4K2AP48426 406 aaPredicted RBP27.25■■□□□ 1.95
SEC23A-213ENST00000557280 WDR63Q8IWG1 891 aa27.25■■□□□ 1.95
SEC23A-213ENST00000557280 NGEFQ8N5V2 710 aa27.25■■□□□ 1.95
SEC23A-213ENST00000557280 RPS6KA4O75676 772 aa27.24■■□□□ 1.95
SEC23A-213ENST00000557280 A1BGP04217 495 aa27.24■■□□□ 1.95
SEC23A-213ENST00000557280 HMGB2P26583 209 aaKnown RBP27.24■■□□□ 1.95
SEC23A-213ENST00000557280 TEX13AQ9BXU3 409 aaPredicted RBP27.24■■□□□ 1.95
SEC23A-213ENST00000557280 SSFA2P28290 1259 aa27.23■■□□□ 1.95
SEC23A-213ENST00000557280 RTCBQ9Y3I0 505 aaKnown RBP27.23■■□□□ 1.95
SEC23A-213ENST00000557280 C4AP0C0L4 1744 aa27.23■■□□□ 1.95
SEC23A-213ENST00000557280 SOS1Q07889 1333 aaPredicted RBP27.22■■□□□ 1.95
SEC23A-213ENST00000557280 CANXP27824 592 aaKnown RBP27.22■■□□□ 1.95
SEC23A-213ENST00000557280 FANCIQ9NVI1 1328 aa27.21■■□□□ 1.95
SEC23A-213ENST00000557280 ZBTB7AO95365 584 aa27.21■■□□□ 1.95
SEC23A-213ENST00000557280 MSH5O43196 834 aa27.2■■□□□ 1.94
SEC23A-213ENST00000557280 NBPF26B4DH59 902 aa27.19■■□□□ 1.94
SEC23A-213ENST00000557280 NBPF10Q6P3W6 841 aaKnown RBP27.19■■□□□ 1.94
SEC23A-213ENST00000557280 NBPF15Q8N660 670 aa27.19■■□□□ 1.94
SEC23A-213ENST00000557280 ARHGEF1Q92888 912 aaKnown RBP27.19■■□□□ 1.94
SEC23A-213ENST00000557280 COL15A1P39059 1388 aa27.19■■□□□ 1.94
SEC23A-213ENST00000557280 C8orf58Q8NAV2 365 aa27.18■■□□□ 1.94
SEC23A-213ENST00000557280 DUSP27Q5VZP5 1158 aa27.17■■□□□ 1.94
SEC23A-213ENST00000557280 FLAD1Q8NFF5 587 aa27.17■■□□□ 1.94
SEC23A-213ENST00000557280 NECTIN2Q92692 538 aa27.17■■□□□ 1.94
SEC23A-213ENST00000557280 ELL2O00472 640 aaPredicted RBP27.16■■□□□ 1.94
SEC23A-213ENST00000557280 EIF2S2P20042 333 aaKnown RBP27.16■■□□□ 1.94
SEC23A-213ENST00000557280 HNRNPUQ00839 825 aaKnown RBP eCLIP27.16■■□□□ 1.94
SEC23A-213ENST00000557280 TRAPPC3LQ5T215 181 aa27.16■■□□□ 1.94
SEC23A-213ENST00000557280 TSPYL6Q8N831 410 aa27.16■■□□□ 1.94
SEC23A-213ENST00000557280 ADRA2BP18089 450 aa27.15■■□□□ 1.94
SEC23A-213ENST00000557280 EIF5P55010 431 aaKnown RBP27.15■■□□□ 1.94
SEC23A-213ENST00000557280 MSL1Q68DK7 614 aa27.15■■□□□ 1.94
SEC23A-213ENST00000557280 SRP68Q9UHB9 627 aaKnown RBP27.15■■□□□ 1.94
SEC23A-213ENST00000557280 ATF5Q9Y2D1 282 aaPredicted RBP27.15■■□□□ 1.94
SEC23A-213ENST00000557280 ZNF330Q9Y3S2 320 aaPredicted RBP27.15■■□□□ 1.94
SEC23A-213ENST00000557280 CDCA7LQ96GN5 454 aa27.14■■□□□ 1.94
SEC23A-213ENST00000557280 IL6STP40189 918 aaPredicted RBP27.13■■□□□ 1.93
SEC23A-213ENST00000557280 MTFR1LQ9H019 292 aa27.13■■□□□ 1.93
SEC23A-213ENST00000557280 HOXB7P09629 217 aa27.12■■□□□ 1.93
SEC23A-213ENST00000557280 RFC4P35249 363 aa27.12■■□□□ 1.93
SEC23A-213ENST00000557280 GOLGA2Q08379 1002 aa27.12■■□□□ 1.93
SEC23A-213ENST00000557280 PDIA6Q15084 440 aa27.12■■□□□ 1.93
SEC23A-213ENST00000557280 PROSER3Q2NL68 480 aa27.12■■□□□ 1.93
SEC23A-213ENST00000557280 USP42Q9H9J4 1324 aaKnown RBP27.12■■□□□ 1.93
SEC23A-213ENST00000557280 COL24A1Q17RW2 1714 aa27.11■■□□□ 1.93
SEC23A-213ENST00000557280 ANXA1P04083 346 aa27.11■■□□□ 1.93
SEC23A-213ENST00000557280 MYH16Q9H6N6 1097 aa27.11■■□□□ 1.93
SEC23A-213ENST00000557280 LRP5O75197 1615 aa27.1■■□□□ 1.93
SEC23A-213ENST00000557280 MYL6BP14649 208 aa27.1■■□□□ 1.93
SEC23A-213ENST00000557280 PTGER2P43116 358 aa27.1■■□□□ 1.93
SEC23A-213ENST00000557280 HDGFL1Q5TGJ6 251 aa27.1■■□□□ 1.93
SEC23A-213ENST00000557280 SLC16A10Q8TF71 515 aa27.1■■□□□ 1.93
SEC23A-213ENST00000557280 SCN7AQ01118 1682 aa27.09■■□□□ 1.93
SEC23A-213ENST00000557280 EXOSC9Q06265 439 aaKnown RBP27.09■■□□□ 1.93
SEC23A-213ENST00000557280 SLFN5Q08AF3 891 aa27.09■■□□□ 1.93
SEC23A-213ENST00000557280 LRP10Q7Z4F1 713 aa27.09■■□□□ 1.93
SEC23A-213ENST00000557280 GYS1P13807 737 aa27.08■■□□□ 1.93
SEC23A-213ENST00000557280 SGIP1Q9BQI5 828 aa27.08■■□□□ 1.93
SEC23A-213ENST00000557280 CHPF2Q9P2E5 772 aa27.08■■□□□ 1.93
SEC23A-213ENST00000557280 TBC1D2BQ9UPU7 963 aa27.08■■□□□ 1.93
SEC23A-213ENST00000557280 ERBB4Q15303 1308 aa27.08■■□□□ 1.93
SEC23A-213ENST00000557280 E9PSI1 815 aa27.07■■□□□ 1.92
SEC23A-213ENST00000557280 USPL1Q5W0Q7 1092 aa27.07■■□□□ 1.92
SEC23A-213ENST00000557280 SPON1Q9HCB6 807 aa27.07■■□□□ 1.92
SEC23A-213ENST00000557280 BCORQ6W2J9 1755 aa27.07■■□□□ 1.92
SEC23A-213ENST00000557280 TWISTNBQ3B726 338 aaPredicted RBP27.06■■□□□ 1.92
SEC23A-213ENST00000557280 BCL2L12Q9HB09 334 aa27.06■■□□□ 1.92
SEC23A-213ENST00000557280 NARFQ9UHQ1 456 aa27.06■■□□□ 1.92
SEC23A-213ENST00000557280 DZIP3Q86Y13 1208 aaKnown RBP27.05■■□□□ 1.92
SEC23A-213ENST00000557280 A0A087WZG4 1122 aa27.04■■□□□ 1.92
SEC23A-213ENST00000557280 CAMTA2O94983 1202 aa27.04■■□□□ 1.92
SEC23A-213ENST00000557280 FKBP8Q14318 412 aa27.04■■□□□ 1.92
SEC23A-213ENST00000557280 SRCAPQ6ZRS2 3230 aa27.04■■□□□ 1.92
SEC23A-213ENST00000557280 TCERG1O14776 1098 aaKnown RBP27.03■■□□□ 1.92
SEC23A-213ENST00000557280 ZPR1O75312 459 aa27.03■■□□□ 1.92
SEC23A-213ENST00000557280 TTLL7Q6ZT98 887 aa27.03■■□□□ 1.92
SEC23A-213ENST00000557280 ARXQ96QS3 562 aa27.03■■□□□ 1.92
SEC23A-213ENST00000557280 TRMT2AQ8IZ69 625 aaKnown RBP27.02■■□□□ 1.92
SEC23A-213ENST00000557280 DDX21Q9NR30 783 aaKnown RBP eCLIP27.02■■□□□ 1.92
SEC23A-213ENST00000557280 ZBED9Q6R2W3 1325 aa27.01■■□□□ 1.91
SEC23A-213ENST00000557280 VAMP4O75379 141 aa27.01■■□□□ 1.91
SEC23A-213ENST00000557280 NPM2Q86SE8 214 aaKnown RBP27■■□□□ 1.91
SEC23A-213ENST00000557280 XAGE3Q8WTP9 111 aa26.99■■□□□ 1.91
SEC23A-213ENST00000557280 DBF4Q9UBU7 674 aaPredicted RBP26.99■■□□□ 1.91
SEC23A-213ENST00000557280 MMP10P09238 476 aa26.98■■□□□ 1.91
SEC23A-213ENST00000557280 AIMP1Q12904 312 aaKnown RBP26.97■■□□□ 1.91
SEC23A-213ENST00000557280 HLFQ16534 295 aa26.97■■□□□ 1.91
SEC23A-213ENST00000557280 CCDC30Q5VVM6 783 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms