RNA–Protein interactions for RNA: ENST00000555704.5

KLHDC1-204, Transcript of kelch domain containing 1, humanhuman

TSL 1 (best)

Gene KLHDC1, Length 1,447 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC1-204ENST00000555704 SGIP1Q9BQI5 828 aa33.15■■■□□ 2.9
KLHDC1-204ENST00000555704 CCER2I3L3R5 266 aa33.14■■■□□ 2.9
KLHDC1-204ENST00000555704 STARD3NLO95772 234 aa33.14■■■□□ 2.9
KLHDC1-204ENST00000555704 EIF4A1P60842 406 aaKnown RBP33.14■■■□□ 2.9
KLHDC1-204ENST00000555704 TEX13AQ9BXU3 409 aaPredicted RBP33.14■■■□□ 2.9
KLHDC1-204ENST00000555704 COL24A1Q17RW2 1714 aa33.13■■■□□ 2.89
KLHDC1-204ENST00000555704 SNRPA1P09661 255 aaKnown RBP33.13■■■□□ 2.89
KLHDC1-204ENST00000555704 ADRA2BP18089 450 aa33.13■■■□□ 2.89
KLHDC1-204ENST00000555704 BABAM1Q9NWV8 329 aa33.13■■■□□ 2.89
KLHDC1-204ENST00000555704 TRAPPC3LQ5T215 181 aa33.12■■■□□ 2.89
KLHDC1-204ENST00000555704 SOS1Q07889 1333 aaPredicted RBP33.12■■■□□ 2.89
KLHDC1-204ENST00000555704 ARHGEF1Q92888 912 aaKnown RBP33.11■■■□□ 2.89
KLHDC1-204ENST00000555704 USP16Q9Y5T5 823 aa33.11■■■□□ 2.89
KLHDC1-204ENST00000555704 C4AP0C0L4 1744 aa33.11■■■□□ 2.89
KLHDC1-204ENST00000555704 MSL1Q68DK7 614 aa33.11■■■□□ 2.89
KLHDC1-204ENST00000555704 CHL1O00533 1208 aa33.1■■■□□ 2.89
KLHDC1-204ENST00000555704 CCDC27Q2M243 656 aa33.08■■■□□ 2.89
KLHDC1-204ENST00000555704 LAS1LQ9Y4W2 734 aaKnown RBP33.08■■■□□ 2.89
KLHDC1-204ENST00000555704 LAMB4A4D0S4 1761 aa33.07■■■□□ 2.89
KLHDC1-204ENST00000555704 COL15A1P39059 1388 aa33.07■■■□□ 2.88
KLHDC1-204ENST00000555704 GIGYF1O75420 1035 aaPredicted RBP33.07■■■□□ 2.88
KLHDC1-204ENST00000555704 CANXP27824 592 aaKnown RBP33.07■■■□□ 2.88
KLHDC1-204ENST00000555704 MIER1Q8N108 512 aa33.07■■■□□ 2.88
KLHDC1-204ENST00000555704 A1BGP04217 495 aa33.06■■■□□ 2.88
KLHDC1-204ENST00000555704 CFAP44Q96MT7 982 aa33.06■■■□□ 2.88
KLHDC1-204ENST00000555704 ZNF853P0CG23 659 aa33.04■■■□□ 2.88
KLHDC1-204ENST00000555704 RFC4P35249 363 aa33.04■■■□□ 2.88
KLHDC1-204ENST00000555704 NCBP3Q53F19 620 aaKnown RBP33.04■■■□□ 2.88
KLHDC1-204ENST00000555704 WWC1Q8IX03 1113 aa33.04■■■□□ 2.88
KLHDC1-204ENST00000555704 USP42Q9H9J4 1324 aaKnown RBP33.03■■■□□ 2.88
KLHDC1-204ENST00000555704 EIF5P55010 431 aaKnown RBP33.02■■■□□ 2.88
KLHDC1-204ENST00000555704 CALD1Q05682 793 aaKnown RBP33.02■■■□□ 2.88
KLHDC1-204ENST00000555704 IFT57Q9NWB7 429 aa33.02■■■□□ 2.88
KLHDC1-204ENST00000555704 PPP1R1BQ9UD71 204 aaPredicted RBP33.02■■■□□ 2.88
KLHDC1-204ENST00000555704 SRP68Q9UHB9 627 aaKnown RBP33.02■■■□□ 2.88
KLHDC1-204ENST00000555704 PIP4K2AP48426 406 aaPredicted RBP33.02■■■□□ 2.88
KLHDC1-204ENST00000555704 MBIPQ9NS73 344 aa33.02■■■□□ 2.88
KLHDC1-204ENST00000555704 GYS1P13807 737 aa33.01■■■□□ 2.87
KLHDC1-204ENST00000555704 POLD1P28340 1107 aa33.01■■■□□ 2.87
KLHDC1-204ENST00000555704 IL6STP40189 918 aaPredicted RBP33■■■□□ 2.87
KLHDC1-204ENST00000555704 KRT24Q2M2I5 525 aa33■■■□□ 2.87
KLHDC1-204ENST00000555704 SALL2Q9Y467 1007 aaPredicted RBP33■■■□□ 2.87
KLHDC1-204ENST00000555704 ARXQ96QS3 562 aa32.99■■■□□ 2.87
KLHDC1-204ENST00000555704 GNAI1P63096 354 aa32.98■■■□□ 2.87
KLHDC1-204ENST00000555704 NBPF26B4DH59 902 aa32.97■■■□□ 2.87
KLHDC1-204ENST00000555704 NBPF10Q6P3W6 841 aaKnown RBP32.97■■■□□ 2.87
KLHDC1-204ENST00000555704 NBPF15Q8N660 670 aa32.97■■■□□ 2.87
KLHDC1-204ENST00000555704 ZNF330Q9Y3S2 320 aaPredicted RBP32.97■■■□□ 2.87
KLHDC1-204ENST00000555704 NARFQ9UHQ1 456 aa32.95■■■□□ 2.87
KLHDC1-204ENST00000555704 USPL1Q5W0Q7 1092 aa32.94■■■□□ 2.86
KLHDC1-204ENST00000555704 ZPR1O75312 459 aa32.93■■■□□ 2.86
KLHDC1-204ENST00000555704 FKBP8Q14318 412 aa32.93■■■□□ 2.86
KLHDC1-204ENST00000555704 NLGN1Q8N2Q7 840 aa32.93■■■□□ 2.86
KLHDC1-204ENST00000555704 A0A087WZG4 1122 aa32.92■■■□□ 2.86
KLHDC1-204ENST00000555704 SCN7AQ01118 1682 aa32.92■■■□□ 2.86
KLHDC1-204ENST00000555704 IL16Q14005 1332 aa32.92■■■□□ 2.86
KLHDC1-204ENST00000555704 MMP10P09238 476 aa32.91■■■□□ 2.86
KLHDC1-204ENST00000555704 FHDC1Q9C0D6 1143 aaPredicted RBP32.91■■■□□ 2.86
KLHDC1-204ENST00000555704 BCL2L12Q9HB09 334 aa32.91■■■□□ 2.86
KLHDC1-204ENST00000555704 NGEFQ8N5V2 710 aa32.9■■■□□ 2.86
KLHDC1-204ENST00000555704 TBC1D2BQ9UPU7 963 aa32.9■■■□□ 2.86
KLHDC1-204ENST00000555704 EIF2S2P20042 333 aaKnown RBP32.89■■■□□ 2.86
KLHDC1-204ENST00000555704 TSR2Q969E8 191 aaKnown RBP32.89■■■□□ 2.86
KLHDC1-204ENST00000555704 ERBB4Q15303 1308 aa32.88■■■□□ 2.85
KLHDC1-204ENST00000555704 WDR63Q8IWG1 891 aa32.87■■■□□ 2.85
KLHDC1-204ENST00000555704 HOXB7P09629 217 aa32.86■■■□□ 2.85
KLHDC1-204ENST00000555704 NPM2Q86SE8 214 aaKnown RBP32.86■■■□□ 2.85
KLHDC1-204ENST00000555704 DZIP3Q86Y13 1208 aaKnown RBP32.86■■■□□ 2.85
KLHDC1-204ENST00000555704 CAMTA2O94983 1202 aa32.85■■■□□ 2.85
KLHDC1-204ENST00000555704 DUSP27Q5VZP5 1158 aa32.85■■■□□ 2.85
KLHDC1-204ENST00000555704 BCORQ6W2J9 1755 aa32.85■■■□□ 2.85
KLHDC1-204ENST00000555704 ZNF521Q96K83 1311 aa32.85■■■□□ 2.85
KLHDC1-204ENST00000555704 PDIA6Q15084 440 aa32.85■■■□□ 2.85
KLHDC1-204ENST00000555704 NECTIN2Q92692 538 aa32.85■■■□□ 2.85
KLHDC1-204ENST00000555704 MYL6BP14649 208 aa32.84■■■□□ 2.85
KLHDC1-204ENST00000555704 SYT17Q9BSW7 474 aa32.84■■■□□ 2.85
KLHDC1-204ENST00000555704 DDR1Q08345 913 aa32.83■■■□□ 2.85
KLHDC1-204ENST00000555704 LRP10Q7Z4F1 713 aa32.83■■■□□ 2.85
KLHDC1-204ENST00000555704 KLHL34Q8N239 644 aa32.83■■■□□ 2.85
KLHDC1-204ENST00000555704 C8orf58Q8NAV2 365 aa32.83■■■□□ 2.85
KLHDC1-204ENST00000555704 SPINK5Q9NQ38 1064 aaPredicted RBP32.83■■■□□ 2.85
KLHDC1-204ENST00000555704 PROSER3Q2NL68 480 aa32.82■■■□□ 2.84
KLHDC1-204ENST00000555704 FANCIQ9NVI1 1328 aa32.81■■■□□ 2.84
KLHDC1-204ENST00000555704 ANXA1P04083 346 aa32.81■■■□□ 2.84
KLHDC1-204ENST00000555704 TM4SF1P30408 202 aa32.81■■■□□ 2.84
KLHDC1-204ENST00000555704 NFIXQ14938 502 aa32.81■■■□□ 2.84
KLHDC1-204ENST00000555704 HDGFL1Q5TGJ6 251 aa32.81■■■□□ 2.84
KLHDC1-204ENST00000555704 ELL2O00472 640 aaPredicted RBP32.79■■■□□ 2.84
KLHDC1-204ENST00000555704 PARP3Q9Y6F1 533 aa32.79■■■□□ 2.84
KLHDC1-204ENST00000555704 POLRMTO00411 1230 aaKnown RBP32.78■■■□□ 2.84
KLHDC1-204ENST00000555704 TSPYL6Q8N831 410 aa32.78■■■□□ 2.84
KLHDC1-204ENST00000555704 TBC1D9BQ66K14 1250 aa32.77■■■□□ 2.84
KLHDC1-204ENST00000555704 TTLL7Q6ZT98 887 aa32.77■■■□□ 2.84
KLHDC1-204ENST00000555704 CHPF2Q9P2E5 772 aa32.77■■■□□ 2.84
KLHDC1-204ENST00000555704 C10orf71Q711Q0 1435 aa32.76■■■□□ 2.83
KLHDC1-204ENST00000555704 NLGN2Q8NFZ4 835 aa32.76■■■□□ 2.83
KLHDC1-204ENST00000555704 DDX21Q9NR30 783 aaKnown RBP eCLIP32.76■■■□□ 2.83
KLHDC1-204ENST00000555704 BICDL1Q6ZP65 573 aa32.75■■■□□ 2.83
KLHDC1-204ENST00000555704 CD2APQ9Y5K6 639 aa32.75■■■□□ 2.83
KLHDC1-204ENST00000555704 MAP3K15Q6ZN16 1313 aa32.73■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms