RNA–Protein interactions for RNA: ENST00000555015.5

SRP54-AS1-202, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 3

Gene SRP54-AS1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-202ENST00000555015 WWC1Q8IX03 1113 aa16.82■□□□□ 0.28
SRP54-AS1-202ENST00000555015 PDGFDQ9GZP0 370 aaPredicted RBP16.82■□□□□ 0.28
SRP54-AS1-202ENST00000555015 CCDC87Q9NVE4 849 aa16.82■□□□□ 0.28
SRP54-AS1-202ENST00000555015 RTCBQ9Y3I0 505 aaKnown RBP16.82■□□□□ 0.28
SRP54-AS1-202ENST00000555015 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.81■□□□□ 0.28
SRP54-AS1-202ENST00000555015 ZNF853P0CG23 659 aa16.81■□□□□ 0.28
SRP54-AS1-202ENST00000555015 GNAI1P63096 354 aa16.81■□□□□ 0.28
SRP54-AS1-202ENST00000555015 INTS5Q6P9B9 1019 aaKnown RBP16.81■□□□□ 0.28
SRP54-AS1-202ENST00000555015 AMIGO3Q86WK7 504 aa16.81■□□□□ 0.28
SRP54-AS1-202ENST00000555015 SLC16A10Q8TF71 515 aa16.81■□□□□ 0.28
SRP54-AS1-202ENST00000555015 SENP3-EIF4A1A0A087X0R7 540 aa16.8■□□□□ 0.28
SRP54-AS1-202ENST00000555015 RPS6KA4O75676 772 aa16.8■□□□□ 0.28
SRP54-AS1-202ENST00000555015 PHF14O94880 888 aa16.8■□□□□ 0.28
SRP54-AS1-202ENST00000555015 COL23A1Q86Y22 540 aaPredicted RBP16.8■□□□□ 0.28
SRP54-AS1-202ENST00000555015 LAS1LQ9Y4W2 734 aaKnown RBP16.8■□□□□ 0.28
SRP54-AS1-202ENST00000555015 IL16Q14005 1332 aa16.79■□□□□ 0.28
SRP54-AS1-202ENST00000555015 GIGYF1O75420 1035 aaPredicted RBP16.79■□□□□ 0.28
SRP54-AS1-202ENST00000555015 MTFR1LQ9H019 292 aa16.79■□□□□ 0.28
SRP54-AS1-202ENST00000555015 ZBTB1Q9Y2K1 713 aa16.79■□□□□ 0.28
SRP54-AS1-202ENST00000555015 SCN7AQ01118 1682 aa16.78■□□□□ 0.28
SRP54-AS1-202ENST00000555015 SOS1Q07889 1333 aaPredicted RBP16.78■□□□□ 0.28
SRP54-AS1-202ENST00000555015 PRAMEF22A3QJZ6 481 aa16.78■□□□□ 0.28
SRP54-AS1-202ENST00000555015 TRAPPC3LQ5T215 181 aa16.78■□□□□ 0.28
SRP54-AS1-202ENST00000555015 WDR63Q8IWG1 891 aa16.78■□□□□ 0.28
SRP54-AS1-202ENST00000555015 MBIPQ9NS73 344 aa16.78■□□□□ 0.28
SRP54-AS1-202ENST00000555015 COL15A1P39059 1388 aa16.77■□□□□ 0.28
SRP54-AS1-202ENST00000555015 BCORQ6W2J9 1755 aa16.77■□□□□ 0.28
SRP54-AS1-202ENST00000555015 ZBTB7AO95365 584 aa16.77■□□□□ 0.28
SRP54-AS1-202ENST00000555015 SALL2Q9Y467 1007 aaPredicted RBP16.77■□□□□ 0.28
SRP54-AS1-202ENST00000555015 USP16Q9Y5T5 823 aa16.77■□□□□ 0.28
SRP54-AS1-202ENST00000555015 SMIM5Q71RC9 77 aa16.76■□□□□ 0.27
SRP54-AS1-202ENST00000555015 POTEDQ86YR6 584 aa16.76■□□□□ 0.27
SRP54-AS1-202ENST00000555015 SPON1Q9HCB6 807 aa16.76■□□□□ 0.27
SRP54-AS1-202ENST00000555015 ZNF521Q96K83 1311 aa16.75■□□□□ 0.27
SRP54-AS1-202ENST00000555015 HOXB7P09629 217 aa16.75■□□□□ 0.27
SRP54-AS1-202ENST00000555015 CANXP27824 592 aaKnown RBP16.75■□□□□ 0.27
SRP54-AS1-202ENST00000555015 IL6STP40189 918 aaPredicted RBP16.75■□□□□ 0.27
SRP54-AS1-202ENST00000555015 ARHGEF1Q92888 912 aaKnown RBP16.75■□□□□ 0.27
SRP54-AS1-202ENST00000555015 A1BGP04217 495 aa16.74■□□□□ 0.27
SRP54-AS1-202ENST00000555015 RFC4P35249 363 aa16.74■□□□□ 0.27
SRP54-AS1-202ENST00000555015 EIF5P55010 431 aaKnown RBP16.74■□□□□ 0.27
SRP54-AS1-202ENST00000555015 ERBB4Q15303 1308 aa16.73■□□□□ 0.27
SRP54-AS1-202ENST00000555015 A0A087WZG4 1122 aa16.73■□□□□ 0.27
SRP54-AS1-202ENST00000555015 USP42Q9H9J4 1324 aaKnown RBP16.72■□□□□ 0.27
SRP54-AS1-202ENST00000555015 PTGER2P43116 358 aa16.72■□□□□ 0.27
SRP54-AS1-202ENST00000555015 SGIP1Q9BQI5 828 aa16.72■□□□□ 0.27
SRP54-AS1-202ENST00000555015 ATF5Q9Y2D1 282 aaPredicted RBP16.72■□□□□ 0.27
SRP54-AS1-202ENST00000555015 NBPF26B4DH59 902 aa16.71■□□□□ 0.27
SRP54-AS1-202ENST00000555015 KRT24Q2M2I5 525 aa16.71■□□□□ 0.27
SRP54-AS1-202ENST00000555015 NBPF10Q6P3W6 841 aaKnown RBP16.71■□□□□ 0.27
SRP54-AS1-202ENST00000555015 NPM2Q86SE8 214 aaKnown RBP16.71■□□□□ 0.27
SRP54-AS1-202ENST00000555015 NBPF15Q8N660 670 aa16.71■□□□□ 0.27
SRP54-AS1-202ENST00000555015 TSR2Q969E8 191 aaKnown RBP16.71■□□□□ 0.27
SRP54-AS1-202ENST00000555015 NARFQ9UHQ1 456 aa16.71■□□□□ 0.27
SRP54-AS1-202ENST00000555015 CACNA1FO60840 1977 aa16.71■□□□□ 0.27
SRP54-AS1-202ENST00000555015 FANCIQ9NVI1 1328 aa16.7■□□□□ 0.26
SRP54-AS1-202ENST00000555015 ZPR1O75312 459 aa16.7■□□□□ 0.26
SRP54-AS1-202ENST00000555015 GYS1P13807 737 aa16.7■□□□□ 0.26
SRP54-AS1-202ENST00000555015 POLD1P28340 1107 aa16.7■□□□□ 0.26
SRP54-AS1-202ENST00000555015 DUSP27Q5VZP5 1158 aa16.7■□□□□ 0.26
SRP54-AS1-202ENST00000555015 MYH16Q9H6N6 1097 aa16.7■□□□□ 0.26
SRP54-AS1-202ENST00000555015 CHD4Q14839 1912 aa16.7■□□□□ 0.26
SRP54-AS1-202ENST00000555015 NUP98P52948 1817 aa16.69■□□□□ 0.26
SRP54-AS1-202ENST00000555015 EIF2S2P20042 333 aaKnown RBP16.69■□□□□ 0.26
SRP54-AS1-202ENST00000555015 PIP4K2AP48426 406 aaPredicted RBP16.69■□□□□ 0.26
SRP54-AS1-202ENST00000555015 MSL1Q68DK7 614 aa16.69■□□□□ 0.26
SRP54-AS1-202ENST00000555015 NLGN1Q8N2Q7 840 aa16.69■□□□□ 0.26
SRP54-AS1-202ENST00000555015 ZNF330Q9Y3S2 320 aaPredicted RBP16.69■□□□□ 0.26
SRP54-AS1-202ENST00000555015 HDGFL1Q5TGJ6 251 aa16.68■□□□□ 0.26
SRP54-AS1-202ENST00000555015 SRP68Q9UHB9 627 aaKnown RBP16.68■□□□□ 0.26
SRP54-AS1-202ENST00000555015 GOLGA2Q08379 1002 aa16.67■□□□□ 0.26
SRP54-AS1-202ENST00000555015 USPL1Q5W0Q7 1092 aa16.67■□□□□ 0.26
SRP54-AS1-202ENST00000555015 C8orf58Q8NAV2 365 aa16.67■□□□□ 0.26
SRP54-AS1-202ENST00000555015 CHMP4AQ9BY43 222 aa16.67■□□□□ 0.26
SRP54-AS1-202ENST00000555015 SPINK5Q9NQ38 1064 aaPredicted RBP16.67■□□□□ 0.26
SRP54-AS1-202ENST00000555015 AFDNP55196 1824 aaKnown RBP16.67■□□□□ 0.26
SRP54-AS1-202ENST00000555015 KIF13BQ9NQT8 1826 aa16.66■□□□□ 0.26
SRP54-AS1-202ENST00000555015 PDIA6Q15084 440 aa16.66■□□□□ 0.26
SRP54-AS1-202ENST00000555015 DZIP3Q86Y13 1208 aaKnown RBP16.66■□□□□ 0.26
SRP54-AS1-202ENST00000555015 PPP1R1BQ9UD71 204 aaPredicted RBP16.66■□□□□ 0.26
SRP54-AS1-202ENST00000555015 TBC1D2BQ9UPU7 963 aa16.66■□□□□ 0.26
SRP54-AS1-202ENST00000555015 ANKRD36CQ5JPF3 1778 aa16.66■□□□□ 0.26
SRP54-AS1-202ENST00000555015 NRXN2Q9P2S2 1712 aa16.65■□□□□ 0.26
SRP54-AS1-202ENST00000555015 E9PSI1 815 aa16.65■□□□□ 0.26
SRP54-AS1-202ENST00000555015 RGL2O15211 777 aa16.65■□□□□ 0.26
SRP54-AS1-202ENST00000555015 MYL6BP14649 208 aa16.65■□□□□ 0.26
SRP54-AS1-202ENST00000555015 FKBP8Q14318 412 aa16.65■□□□□ 0.26
SRP54-AS1-202ENST00000555015 NECTIN2Q92692 538 aa16.65■□□□□ 0.26
SRP54-AS1-202ENST00000555015 ARXQ96QS3 562 aa16.65■□□□□ 0.26
SRP54-AS1-202ENST00000555015 DDX21Q9NR30 783 aaKnown RBP eCLIP16.65■□□□□ 0.26
SRP54-AS1-202ENST00000555015 ELL2O00472 640 aaPredicted RBP16.64■□□□□ 0.25
SRP54-AS1-202ENST00000555015 CAMTA2O94983 1202 aa16.64■□□□□ 0.25
SRP54-AS1-202ENST00000555015 MMP10P09238 476 aa16.64■□□□□ 0.25
SRP54-AS1-202ENST00000555015 TWISTNBQ3B726 338 aaPredicted RBP16.64■□□□□ 0.25
SRP54-AS1-202ENST00000555015 LRP10Q7Z4F1 713 aa16.64■□□□□ 0.25
SRP54-AS1-202ENST00000555015 TSPYL6Q8N831 410 aa16.64■□□□□ 0.25
SRP54-AS1-202ENST00000555015 BCL2L12Q9HB09 334 aa16.64■□□□□ 0.25
SRP54-AS1-202ENST00000555015 CHPF2Q9P2E5 772 aa16.64■□□□□ 0.25
SRP54-AS1-202ENST00000555015 DBF4Q9UBU7 674 aaPredicted RBP16.64■□□□□ 0.25
SRP54-AS1-202ENST00000555015 HNRNPUQ00839 825 aaKnown RBP eCLIP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms