RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 NGEFQ8N5V2 710 aa31.68■■■□□ 2.66
SDR39U1-209ENST00000554947 LAMB4A4D0S4 1761 aa31.68■■■□□ 2.66
SDR39U1-209ENST00000554947 CHL1O00533 1208 aa31.67■■■□□ 2.66
SDR39U1-209ENST00000554947 EIF4A1P60842 406 aaKnown RBP31.67■■■□□ 2.66
SDR39U1-209ENST00000554947 ZBTB7AO95365 584 aa31.66■■■□□ 2.66
SDR39U1-209ENST00000554947 TRAPPC3LQ5T215 181 aa31.66■■■□□ 2.66
SDR39U1-209ENST00000554947 PHF14O94880 888 aa31.65■■■□□ 2.66
SDR39U1-209ENST00000554947 CFAP44Q96MT7 982 aa31.65■■■□□ 2.66
SDR39U1-209ENST00000554947 C4AP0C0L4 1744 aa31.64■■■□□ 2.66
SDR39U1-209ENST00000554947 MSH5O43196 834 aa31.64■■■□□ 2.66
SDR39U1-209ENST00000554947 MIER1Q8N108 512 aa31.63■■■□□ 2.65
SDR39U1-209ENST00000554947 ZNF853P0CG23 659 aa31.62■■■□□ 2.65
SDR39U1-209ENST00000554947 SOS1Q07889 1333 aaPredicted RBP31.62■■■□□ 2.65
SDR39U1-209ENST00000554947 IFT57Q9NWB7 429 aa31.62■■■□□ 2.65
SDR39U1-209ENST00000554947 GIGYF1O75420 1035 aaPredicted RBP31.61■■■□□ 2.65
SDR39U1-209ENST00000554947 WWC1Q8IX03 1113 aa31.61■■■□□ 2.65
SDR39U1-209ENST00000554947 ZBTB1Q9Y2K1 713 aa31.61■■■□□ 2.65
SDR39U1-209ENST00000554947 USP16Q9Y5T5 823 aa31.61■■■□□ 2.65
SDR39U1-209ENST00000554947 GNAI1P63096 354 aa31.6■■■□□ 2.65
SDR39U1-209ENST00000554947 ARHGEF1Q92888 912 aaKnown RBP31.6■■■□□ 2.65
SDR39U1-209ENST00000554947 ATF5Q9Y2D1 282 aaPredicted RBP31.6■■■□□ 2.65
SDR39U1-209ENST00000554947 PTGER2P43116 358 aa31.59■■■□□ 2.65
SDR39U1-209ENST00000554947 SMIM5Q71RC9 77 aa31.59■■■□□ 2.65
SDR39U1-209ENST00000554947 SGIP1Q9BQI5 828 aa31.59■■■□□ 2.65
SDR39U1-209ENST00000554947 PRAMEF22A3QJZ6 481 aa31.58■■■□□ 2.65
SDR39U1-209ENST00000554947 LAS1LQ9Y4W2 734 aaKnown RBP31.58■■■□□ 2.65
SDR39U1-209ENST00000554947 IL16Q14005 1332 aa31.57■■■□□ 2.64
SDR39U1-209ENST00000554947 RFC4P35249 363 aa31.57■■■□□ 2.64
SDR39U1-209ENST00000554947 SRCAPQ6ZRS2 3230 aa31.56■■■□□ 2.64
SDR39U1-209ENST00000554947 IL6STP40189 918 aaPredicted RBP31.56■■■□□ 2.64
SDR39U1-209ENST00000554947 EIF5P55010 431 aaKnown RBP31.56■■■□□ 2.64
SDR39U1-209ENST00000554947 COL15A1P39059 1388 aa31.56■■■□□ 2.64
SDR39U1-209ENST00000554947 A0A087WZG4 1122 aa31.54■■■□□ 2.64
SDR39U1-209ENST00000554947 A1BGP04217 495 aa31.54■■■□□ 2.64
SDR39U1-209ENST00000554947 CANXP27824 592 aaKnown RBP31.54■■■□□ 2.64
SDR39U1-209ENST00000554947 WDR63Q8IWG1 891 aa31.54■■■□□ 2.64
SDR39U1-209ENST00000554947 MBIPQ9NS73 344 aa31.54■■■□□ 2.64
SDR39U1-209ENST00000554947 POLD1P28340 1107 aa31.53■■■□□ 2.64
SDR39U1-209ENST00000554947 USP42Q9H9J4 1324 aaKnown RBP31.51■■■□□ 2.64
SDR39U1-209ENST00000554947 HOXB7P09629 217 aa31.51■■■□□ 2.63
SDR39U1-209ENST00000554947 ERBB4Q15303 1308 aa31.5■■■□□ 2.63
SDR39U1-209ENST00000554947 NLGN1Q8N2Q7 840 aa31.5■■■□□ 2.63
SDR39U1-209ENST00000554947 GYS1P13807 737 aa31.49■■■□□ 2.63
SDR39U1-209ENST00000554947 NARFQ9UHQ1 456 aa31.49■■■□□ 2.63
SDR39U1-209ENST00000554947 SENP3-EIF4A1A0A087X0R7 540 aa31.48■■■□□ 2.63
SDR39U1-209ENST00000554947 ZPR1O75312 459 aa31.48■■■□□ 2.63
SDR39U1-209ENST00000554947 MSL1Q68DK7 614 aa31.48■■■□□ 2.63
SDR39U1-209ENST00000554947 NPM2Q86SE8 214 aaKnown RBP31.48■■■□□ 2.63
SDR39U1-209ENST00000554947 PPP1R1BQ9UD71 204 aaPredicted RBP31.48■■■□□ 2.63
SDR39U1-209ENST00000554947 NBPF26B4DH59 902 aa31.46■■■□□ 2.63
SDR39U1-209ENST00000554947 NBPF10Q6P3W6 841 aaKnown RBP31.46■■■□□ 2.63
SDR39U1-209ENST00000554947 NBPF15Q8N660 670 aa31.46■■■□□ 2.63
SDR39U1-209ENST00000554947 ARXQ96QS3 562 aa31.46■■■□□ 2.63
SDR39U1-209ENST00000554947 SALL2Q9Y467 1007 aaPredicted RBP31.46■■■□□ 2.63
SDR39U1-209ENST00000554947 SCN7AQ01118 1682 aa31.44■■■□□ 2.62
SDR39U1-209ENST00000554947 SRP68Q9UHB9 627 aaKnown RBP31.44■■■□□ 2.62
SDR39U1-209ENST00000554947 ZNF521Q96K83 1311 aa31.44■■■□□ 2.62
SDR39U1-209ENST00000554947 BCORQ6W2J9 1755 aa31.43■■■□□ 2.62
SDR39U1-209ENST00000554947 KRT24Q2M2I5 525 aa31.42■■■□□ 2.62
SDR39U1-209ENST00000554947 USPL1Q5W0Q7 1092 aa31.42■■■□□ 2.62
SDR39U1-209ENST00000554947 RGL2O15211 777 aa31.41■■■□□ 2.62
SDR39U1-209ENST00000554947 DUSP27Q5VZP5 1158 aa31.41■■■□□ 2.62
SDR39U1-209ENST00000554947 ZNF330Q9Y3S2 320 aaPredicted RBP31.41■■■□□ 2.62
SDR39U1-209ENST00000554947 EIF2S2P20042 333 aaKnown RBP31.4■■■□□ 2.62
SDR39U1-209ENST00000554947 PIP4K2AP48426 406 aaPredicted RBP31.4■■■□□ 2.62
SDR39U1-209ENST00000554947 CHMP4AQ9BY43 222 aa31.4■■■□□ 2.62
SDR39U1-209ENST00000554947 FKBP8Q14318 412 aa31.39■■■□□ 2.62
SDR39U1-209ENST00000554947 DZIP3Q86Y13 1208 aaKnown RBP31.39■■■□□ 2.62
SDR39U1-209ENST00000554947 MMP10P09238 476 aa31.38■■■□□ 2.61
SDR39U1-209ENST00000554947 TBC1D2BQ9UPU7 963 aa31.38■■■□□ 2.61
SDR39U1-209ENST00000554947 TSR2Q969E8 191 aaKnown RBP31.37■■■□□ 2.61
SDR39U1-209ENST00000554947 BCL2L12Q9HB09 334 aa31.37■■■□□ 2.61
SDR39U1-209ENST00000554947 CAMTA2O94983 1202 aa31.36■■■□□ 2.61
SDR39U1-209ENST00000554947 PDIA6Q15084 440 aa31.36■■■□□ 2.61
SDR39U1-209ENST00000554947 HDGFL1Q5TGJ6 251 aa31.36■■■□□ 2.61
SDR39U1-209ENST00000554947 FANCIQ9NVI1 1328 aa31.35■■■□□ 2.61
SDR39U1-209ENST00000554947 TM4SF1P30408 202 aa31.35■■■□□ 2.61
SDR39U1-209ENST00000554947 CLEC4GQ6UXB4 293 aa31.35■■■□□ 2.61
SDR39U1-209ENST00000554947 MYH16Q9H6N6 1097 aa31.35■■■□□ 2.61
SDR39U1-209ENST00000554947 DDX21Q9NR30 783 aaKnown RBP eCLIP31.35■■■□□ 2.61
SDR39U1-209ENST00000554947 LRP10Q7Z4F1 713 aa31.34■■■□□ 2.61
SDR39U1-209ENST00000554947 C8orf58Q8NAV2 365 aa31.34■■■□□ 2.61
SDR39U1-209ENST00000554947 MYL6BP14649 208 aa31.33■■■□□ 2.61
SDR39U1-209ENST00000554947 FHDC1Q9C0D6 1143 aaPredicted RBP31.33■■■□□ 2.61
SDR39U1-209ENST00000554947 PARP3Q9Y6F1 533 aa31.33■■■□□ 2.61
SDR39U1-209ENST00000554947 CACNA1FO60840 1977 aa31.32■■■□□ 2.6
SDR39U1-209ENST00000554947 GOLGA2Q08379 1002 aa31.32■■■□□ 2.6
SDR39U1-209ENST00000554947 DBF4Q9UBU7 674 aaPredicted RBP31.32■■■□□ 2.6
SDR39U1-209ENST00000554947 ZNF652Q9Y2D9 606 aa31.32■■■□□ 2.6
SDR39U1-209ENST00000554947 NUP98P52948 1817 aa31.32■■■□□ 2.6
SDR39U1-209ENST00000554947 KIF13BQ9NQT8 1826 aa31.32■■■□□ 2.6
SDR39U1-209ENST00000554947 ERVV-1B6SEH8 477 aa31.31■■■□□ 2.6
SDR39U1-209ENST00000554947 SYT17Q9BSW7 474 aa31.3■■■□□ 2.6
SDR39U1-209ENST00000554947 SPINK5Q9NQ38 1064 aaPredicted RBP31.3■■■□□ 2.6
SDR39U1-209ENST00000554947 CD2APQ9Y5K6 639 aa31.3■■■□□ 2.6
SDR39U1-209ENST00000554947 AFDNP55196 1824 aaKnown RBP31.3■■■□□ 2.6
SDR39U1-209ENST00000554947 NRXN2Q9P2S2 1712 aa31.29■■■□□ 2.6
SDR39U1-209ENST00000554947 NFIXQ14938 502 aa31.29■■■□□ 2.6
SDR39U1-209ENST00000554947 KIF6Q6ZMV9 814 aa31.29■■■□□ 2.6
SDR39U1-209ENST00000554947 NECTIN2Q92692 538 aa31.29■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms