RNA–Protein interactions for RNA: ENST00000554628.5

PTPN21-206, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 1,571 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-206ENST00000554628 PHF14O94880 888 aa23.66■■□□□ 1.38
PTPN21-206ENST00000554628 STARD3NLO95772 234 aa23.66■■□□□ 1.38
PTPN21-206ENST00000554628 COL23A1Q86Y22 540 aaPredicted RBP23.66■■□□□ 1.38
PTPN21-206ENST00000554628 NGEFQ8N5V2 710 aa23.66■■□□□ 1.38
PTPN21-206ENST00000554628 CCDC87Q9NVE4 849 aa23.66■■□□□ 1.38
PTPN21-206ENST00000554628 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.65■■□□□ 1.38
PTPN21-206ENST00000554628 GIGYF1O75420 1035 aaPredicted RBP23.65■■□□□ 1.38
PTPN21-206ENST00000554628 GNAI1P63096 354 aa23.65■■□□□ 1.38
PTPN21-206ENST00000554628 MBIPQ9NS73 344 aa23.65■■□□□ 1.38
PTPN21-206ENST00000554628 RTCBQ9Y3I0 505 aaKnown RBP23.65■■□□□ 1.38
PTPN21-206ENST00000554628 RPS6KA4O75676 772 aa23.65■■□□□ 1.38
PTPN21-206ENST00000554628 SSFA2P28290 1259 aa23.65■■□□□ 1.38
PTPN21-206ENST00000554628 FLAD1Q8NFF5 587 aa23.64■■□□□ 1.37
PTPN21-206ENST00000554628 ZBTB1Q9Y2K1 713 aa23.64■■□□□ 1.37
PTPN21-206ENST00000554628 MSH5O43196 834 aa23.63■■□□□ 1.37
PTPN21-206ENST00000554628 C4AP0C0L4 1744 aa23.63■■□□□ 1.37
PTPN21-206ENST00000554628 A1BGP04217 495 aa23.62■■□□□ 1.37
PTPN21-206ENST00000554628 KRT24Q2M2I5 525 aa23.62■■□□□ 1.37
PTPN21-206ENST00000554628 WDR63Q8IWG1 891 aa23.62■■□□□ 1.37
PTPN21-206ENST00000554628 CANXP27824 592 aaKnown RBP23.61■■□□□ 1.37
PTPN21-206ENST00000554628 IL16Q14005 1332 aa23.61■■□□□ 1.37
PTPN21-206ENST00000554628 ZBTB7AO95365 584 aa23.61■■□□□ 1.37
PTPN21-206ENST00000554628 TRAPPC3LQ5T215 181 aa23.61■■□□□ 1.37
PTPN21-206ENST00000554628 ARHGEF1Q92888 912 aaKnown RBP23.6■■□□□ 1.37
PTPN21-206ENST00000554628 SOS1Q07889 1333 aaPredicted RBP23.6■■□□□ 1.37
PTPN21-206ENST00000554628 ZNF521Q96K83 1311 aa23.6■■□□□ 1.37
PTPN21-206ENST00000554628 ADRA2BP18089 450 aa23.59■■□□□ 1.37
PTPN21-206ENST00000554628 SLC16A10Q8TF71 515 aa23.59■■□□□ 1.37
PTPN21-206ENST00000554628 TSR2Q969E8 191 aaKnown RBP23.58■■□□□ 1.37
PTPN21-206ENST00000554628 PIP4K2AP48426 406 aaPredicted RBP23.57■■□□□ 1.36
PTPN21-206ENST00000554628 MTFR1LQ9H019 292 aa23.57■■□□□ 1.36
PTPN21-206ENST00000554628 EIF5P55010 431 aaKnown RBP23.57■■□□□ 1.36
PTPN21-206ENST00000554628 SPINK5Q9NQ38 1064 aaPredicted RBP23.57■■□□□ 1.36
PTPN21-206ENST00000554628 ATF5Q9Y2D1 282 aaPredicted RBP23.57■■□□□ 1.36
PTPN21-206ENST00000554628 SRCAPQ6ZRS2 3230 aa23.56■■□□□ 1.36
PTPN21-206ENST00000554628 COL15A1P39059 1388 aa23.56■■□□□ 1.36
PTPN21-206ENST00000554628 COL24A1Q17RW2 1714 aa23.56■■□□□ 1.36
PTPN21-206ENST00000554628 EIF2S2P20042 333 aaKnown RBP23.55■■□□□ 1.36
PTPN21-206ENST00000554628 RFC4P35249 363 aa23.55■■□□□ 1.36
PTPN21-206ENST00000554628 IL6STP40189 918 aaPredicted RBP23.55■■□□□ 1.36
PTPN21-206ENST00000554628 SPON1Q9HCB6 807 aa23.55■■□□□ 1.36
PTPN21-206ENST00000554628 LRP5O75197 1615 aa23.55■■□□□ 1.36
PTPN21-206ENST00000554628 NBPF26B4DH59 902 aa23.54■■□□□ 1.36
PTPN21-206ENST00000554628 DUSP27Q5VZP5 1158 aa23.54■■□□□ 1.36
PTPN21-206ENST00000554628 NBPF10Q6P3W6 841 aaKnown RBP23.54■■□□□ 1.36
PTPN21-206ENST00000554628 NBPF15Q8N660 670 aa23.54■■□□□ 1.36
PTPN21-206ENST00000554628 ZNF330Q9Y3S2 320 aaPredicted RBP23.54■■□□□ 1.36
PTPN21-206ENST00000554628 FANCIQ9NVI1 1328 aa23.53■■□□□ 1.36
PTPN21-206ENST00000554628 ELL2O00472 640 aaPredicted RBP23.52■■□□□ 1.36
PTPN21-206ENST00000554628 HOXB7P09629 217 aa23.52■■□□□ 1.36
PTPN21-206ENST00000554628 MSL1Q68DK7 614 aa23.52■■□□□ 1.36
PTPN21-206ENST00000554628 C8orf58Q8NAV2 365 aa23.52■■□□□ 1.36
PTPN21-206ENST00000554628 NECTIN2Q92692 538 aa23.52■■□□□ 1.36
PTPN21-206ENST00000554628 SRP68Q9UHB9 627 aaKnown RBP23.52■■□□□ 1.36
PTPN21-206ENST00000554628 USP42Q9H9J4 1324 aaKnown RBP23.51■■□□□ 1.35
PTPN21-206ENST00000554628 PTGER2P43116 358 aa23.5■■□□□ 1.35
PTPN21-206ENST00000554628 GOLGA2Q08379 1002 aa23.5■■□□□ 1.35
PTPN21-206ENST00000554628 NPM2Q86SE8 214 aaKnown RBP23.5■■□□□ 1.35
PTPN21-206ENST00000554628 TSPYL6Q8N831 410 aa23.5■■□□□ 1.35
PTPN21-206ENST00000554628 SGIP1Q9BQI5 828 aa23.5■■□□□ 1.35
PTPN21-206ENST00000554628 ERBB4Q15303 1308 aa23.49■■□□□ 1.35
PTPN21-206ENST00000554628 GYS1P13807 737 aa23.49■■□□□ 1.35
PTPN21-206ENST00000554628 HNRNPUQ00839 825 aaKnown RBP eCLIP23.49■■□□□ 1.35
PTPN21-206ENST00000554628 HDGFL1Q5TGJ6 251 aa23.49■■□□□ 1.35
PTPN21-206ENST00000554628 MYH16Q9H6N6 1097 aa23.49■■□□□ 1.35
PTPN21-206ENST00000554628 NARFQ9UHQ1 456 aa23.49■■□□□ 1.35
PTPN21-206ENST00000554628 A0A087WZG4 1122 aa23.48■■□□□ 1.35
PTPN21-206ENST00000554628 ZPR1O75312 459 aa23.48■■□□□ 1.35
PTPN21-206ENST00000554628 MYL6BP14649 208 aa23.48■■□□□ 1.35
PTPN21-206ENST00000554628 USPL1Q5W0Q7 1092 aa23.48■■□□□ 1.35
PTPN21-206ENST00000554628 TBC1D2BQ9UPU7 963 aa23.48■■□□□ 1.35
PTPN21-206ENST00000554628 PDIA6Q15084 440 aa23.48■■□□□ 1.35
PTPN21-206ENST00000554628 ARXQ96QS3 562 aa23.48■■□□□ 1.35
PTPN21-206ENST00000554628 SCN7AQ01118 1682 aa23.47■■□□□ 1.35
PTPN21-206ENST00000554628 BCORQ6W2J9 1755 aa23.47■■□□□ 1.35
PTPN21-206ENST00000554628 ANXA1P04083 346 aa23.46■■□□□ 1.35
PTPN21-206ENST00000554628 PROSER3Q2NL68 480 aa23.46■■□□□ 1.35
PTPN21-206ENST00000554628 DZIP3Q86Y13 1208 aaKnown RBP23.46■■□□□ 1.35
PTPN21-206ENST00000554628 CDCA7LQ96GN5 454 aa23.46■■□□□ 1.35
PTPN21-206ENST00000554628 E9PSI1 815 aa23.45■■□□□ 1.34
PTPN21-206ENST00000554628 EXOSC9Q06265 439 aaKnown RBP23.45■■□□□ 1.34
PTPN21-206ENST00000554628 TWISTNBQ3B726 338 aaPredicted RBP23.45■■□□□ 1.34
PTPN21-206ENST00000554628 NLGN1Q8N2Q7 840 aa23.45■■□□□ 1.34
PTPN21-206ENST00000554628 POLD1P28340 1107 aa23.44■■□□□ 1.34
PTPN21-206ENST00000554628 SLFN5Q08AF3 891 aa23.44■■□□□ 1.34
PTPN21-206ENST00000554628 FKBP8Q14318 412 aa23.44■■□□□ 1.34
PTPN21-206ENST00000554628 LRP10Q7Z4F1 713 aa23.44■■□□□ 1.34
PTPN21-206ENST00000554628 BCL2L12Q9HB09 334 aa23.44■■□□□ 1.34
PTPN21-206ENST00000554628 DDX21Q9NR30 783 aaKnown RBP eCLIP23.44■■□□□ 1.34
PTPN21-206ENST00000554628 CHPF2Q9P2E5 772 aa23.44■■□□□ 1.34
PTPN21-206ENST00000554628 DBF4Q9UBU7 674 aaPredicted RBP23.43■■□□□ 1.34
PTPN21-206ENST00000554628 CAMTA2O94983 1202 aa23.42■■□□□ 1.34
PTPN21-206ENST00000554628 TTLL7Q6ZT98 887 aa23.41■■□□□ 1.34
PTPN21-206ENST00000554628 VAMP4O75379 141 aa23.4■■□□□ 1.34
PTPN21-206ENST00000554628 MMP10P09238 476 aa23.4■■□□□ 1.34
PTPN21-206ENST00000554628 CCDC30Q5VVM6 783 aa23.4■■□□□ 1.34
PTPN21-206ENST00000554628 PPP1R1BQ9UD71 204 aaPredicted RBP23.4■■□□□ 1.34
PTPN21-206ENST00000554628 NUP98P52948 1817 aa23.4■■□□□ 1.34
PTPN21-206ENST00000554628 TRMT2AQ8IZ69 625 aaKnown RBP23.39■■□□□ 1.33
PTPN21-206ENST00000554628 CHMP4AQ9BY43 222 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms