RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 FAM9BQ8IZU0 186 aa15.56■□□□□ 0.08
TMEM253-202ENST00000553744 SGIP1Q9BQI5 828 aa15.56■□□□□ 0.08
TMEM253-202ENST00000553744 BABAM1Q9NWV8 329 aa15.56■□□□□ 0.08
TMEM253-202ENST00000553744 TSPYL4Q9UJ04 414 aa15.56■□□□□ 0.08
TMEM253-202ENST00000553744 ZBTB1Q9Y2K1 713 aa15.56■□□□□ 0.08
TMEM253-202ENST00000553744 C4AP0C0L4 1744 aa15.56■□□□□ 0.08
TMEM253-202ENST00000553744 SOS1Q07889 1333 aaPredicted RBP15.55■□□□□ 0.08
TMEM253-202ENST00000553744 CCER2I3L3R5 266 aa15.55■□□□□ 0.08
TMEM253-202ENST00000553744 SNRPA1P09661 255 aaKnown RBP15.55■□□□□ 0.08
TMEM253-202ENST00000553744 EIF4A1P60842 406 aaKnown RBP15.55■□□□□ 0.08
TMEM253-202ENST00000553744 TRAPPC3LQ5T215 181 aa15.55■□□□□ 0.08
TMEM253-202ENST00000553744 LAMB4A4D0S4 1761 aa15.54■□□□□ 0.08
TMEM253-202ENST00000553744 PRAMEF22A3QJZ6 481 aa15.54■□□□□ 0.08
TMEM253-202ENST00000553744 ARHGEF1Q92888 912 aaKnown RBP15.54■□□□□ 0.08
TMEM253-202ENST00000553744 COL15A1P39059 1388 aa15.53■□□□□ 0.08
TMEM253-202ENST00000553744 CCDC27Q2M243 656 aa15.53■□□□□ 0.08
TMEM253-202ENST00000553744 NCBP3Q53F19 620 aaKnown RBP15.53■□□□□ 0.08
TMEM253-202ENST00000553744 MSL1Q68DK7 614 aa15.53■□□□□ 0.08
TMEM253-202ENST00000553744 USP16Q9Y5T5 823 aa15.53■□□□□ 0.08
TMEM253-202ENST00000553744 CHL1O00533 1208 aa15.52■□□□□ 0.08
TMEM253-202ENST00000553744 POLD1P28340 1107 aa15.52■□□□□ 0.08
TMEM253-202ENST00000553744 RFC4P35249 363 aa15.52■□□□□ 0.08
TMEM253-202ENST00000553744 CALD1Q05682 793 aaKnown RBP15.52■□□□□ 0.08
TMEM253-202ENST00000553744 PPP1R1BQ9UD71 204 aaPredicted RBP15.52■□□□□ 0.08
TMEM253-202ENST00000553744 SENP3-EIF4A1A0A087X0R7 540 aa15.51■□□□□ 0.07
TMEM253-202ENST00000553744 GIGYF1O75420 1035 aaPredicted RBP15.51■□□□□ 0.07
TMEM253-202ENST00000553744 A1BGP04217 495 aa15.51■□□□□ 0.07
TMEM253-202ENST00000553744 CANXP27824 592 aaKnown RBP15.51■□□□□ 0.07
TMEM253-202ENST00000553744 CFAP44Q96MT7 982 aa15.51■□□□□ 0.07
TMEM253-202ENST00000553744 LAS1LQ9Y4W2 734 aaKnown RBP15.51■□□□□ 0.07
TMEM253-202ENST00000553744 UTRNP46939 3433 aa15.51■□□□□ 0.07
TMEM253-202ENST00000553744 USP42Q9H9J4 1324 aaKnown RBP15.5■□□□□ 0.07
TMEM253-202ENST00000553744 IFT57Q9NWB7 429 aa15.5■□□□□ 0.07
TMEM253-202ENST00000553744 ZNF853P0CG23 659 aa15.49■□□□□ 0.07
TMEM253-202ENST00000553744 GYS1P13807 737 aa15.49■□□□□ 0.07
TMEM253-202ENST00000553744 IL6STP40189 918 aaPredicted RBP15.49■□□□□ 0.07
TMEM253-202ENST00000553744 EIF5P55010 431 aaKnown RBP15.49■□□□□ 0.07
TMEM253-202ENST00000553744 WWC1Q8IX03 1113 aa15.49■□□□□ 0.07
TMEM253-202ENST00000553744 ZNF784Q8NCA9 323 aaPredicted RBP15.49■□□□□ 0.07
TMEM253-202ENST00000553744 ARXQ96QS3 562 aa15.49■□□□□ 0.07
TMEM253-202ENST00000553744 SRP68Q9UHB9 627 aaKnown RBP15.49■□□□□ 0.07
TMEM253-202ENST00000553744 DCAF8L1A6NGE4 600 aa15.48■□□□□ 0.07
TMEM253-202ENST00000553744 GNAI1P63096 354 aa15.48■□□□□ 0.07
TMEM253-202ENST00000553744 MBIPQ9NS73 344 aa15.48■□□□□ 0.07
TMEM253-202ENST00000553744 A0A087WZG4 1122 aa15.47■□□□□ 0.07
TMEM253-202ENST00000553744 ZPR1O75312 459 aa15.47■□□□□ 0.07
TMEM253-202ENST00000553744 PIP4K2AP48426 406 aaPredicted RBP15.47■□□□□ 0.07
TMEM253-202ENST00000553744 MIER1Q8N108 512 aa15.47■□□□□ 0.07
TMEM253-202ENST00000553744 NLGN1Q8N2Q7 840 aa15.47■□□□□ 0.07
TMEM253-202ENST00000553744 NARFQ9UHQ1 456 aa15.47■□□□□ 0.07
TMEM253-202ENST00000553744 ZNF330Q9Y3S2 320 aaPredicted RBP15.47■□□□□ 0.07
TMEM253-202ENST00000553744 SCN7AQ01118 1682 aa15.47■□□□□ 0.07
TMEM253-202ENST00000553744 NBPF26B4DH59 902 aa15.46■□□□□ 0.07
TMEM253-202ENST00000553744 KRT24Q2M2I5 525 aa15.46■□□□□ 0.07
TMEM253-202ENST00000553744 USPL1Q5W0Q7 1092 aa15.46■□□□□ 0.07
TMEM253-202ENST00000553744 NBPF10Q6P3W6 841 aaKnown RBP15.46■□□□□ 0.07
TMEM253-202ENST00000553744 NGEFQ8N5V2 710 aa15.46■□□□□ 0.07
TMEM253-202ENST00000553744 NBPF15Q8N660 670 aa15.46■□□□□ 0.07
TMEM253-202ENST00000553744 SALL2Q9Y467 1007 aaPredicted RBP15.46■□□□□ 0.07
TMEM253-202ENST00000553744 IL16Q14005 1332 aa15.45■□□□□ 0.06
TMEM253-202ENST00000553744 MMP10P09238 476 aa15.45■□□□□ 0.06
TMEM253-202ENST00000553744 FKBP8Q14318 412 aa15.45■□□□□ 0.06
TMEM253-202ENST00000553744 NPM2Q86SE8 214 aaKnown RBP15.45■□□□□ 0.06
TMEM253-202ENST00000553744 FHDC1Q9C0D6 1143 aaPredicted RBP15.45■□□□□ 0.06
TMEM253-202ENST00000553744 ERBB4Q15303 1308 aa15.44■□□□□ 0.06
TMEM253-202ENST00000553744 HOXB7P09629 217 aa15.44■□□□□ 0.06
TMEM253-202ENST00000553744 BCL2L12Q9HB09 334 aa15.44■□□□□ 0.06
TMEM253-202ENST00000553744 BCORQ6W2J9 1755 aa15.44■□□□□ 0.06
TMEM253-202ENST00000553744 EIF2S2P20042 333 aaKnown RBP15.43■□□□□ 0.06
TMEM253-202ENST00000553744 IFFO2Q5TF58 517 aa15.43■□□□□ 0.06
TMEM253-202ENST00000553744 DZIP3Q86Y13 1208 aaKnown RBP15.43■□□□□ 0.06
TMEM253-202ENST00000553744 WDR63Q8IWG1 891 aa15.43■□□□□ 0.06
TMEM253-202ENST00000553744 TBC1D2BQ9UPU7 963 aa15.43■□□□□ 0.06
TMEM253-202ENST00000553744 CAMTA2O94983 1202 aa15.42■□□□□ 0.06
TMEM253-202ENST00000553744 SYT17Q9BSW7 474 aa15.42■□□□□ 0.06
TMEM253-202ENST00000553744 DUSP27Q5VZP5 1158 aa15.41■□□□□ 0.06
TMEM253-202ENST00000553744 KLHL34Q8N239 644 aa15.41■□□□□ 0.06
TMEM253-202ENST00000553744 TSR2Q969E8 191 aaKnown RBP15.41■□□□□ 0.06
TMEM253-202ENST00000553744 MYL6BP14649 208 aa15.4■□□□□ 0.06
TMEM253-202ENST00000553744 TM4SF1P30408 202 aa15.4■□□□□ 0.06
TMEM253-202ENST00000553744 C1QTNF8P60827 252 aa15.4■□□□□ 0.06
TMEM253-202ENST00000553744 DDR1Q08345 913 aa15.4■□□□□ 0.06
TMEM253-202ENST00000553744 PDIA6Q15084 440 aa15.4■□□□□ 0.06
TMEM253-202ENST00000553744 HDGFL1Q5TGJ6 251 aa15.4■□□□□ 0.06
TMEM253-202ENST00000553744 NECTIN2Q92692 538 aa15.4■□□□□ 0.06
TMEM253-202ENST00000553744 PARP3Q9Y6F1 533 aa15.4■□□□□ 0.06
TMEM253-202ENST00000553744 ZNF521Q96K83 1311 aa15.4■□□□□ 0.06
TMEM253-202ENST00000553744 CEP350Q5VT06 3117 aa15.39■□□□□ 0.05
TMEM253-202ENST00000553744 POLRMTO00411 1230 aaKnown RBP15.39■□□□□ 0.05
TMEM253-202ENST00000553744 NFIXQ14938 502 aa15.39■□□□□ 0.05
TMEM253-202ENST00000553744 LRP10Q7Z4F1 713 aa15.39■□□□□ 0.05
TMEM253-202ENST00000553744 CD2APQ9Y5K6 639 aa15.39■□□□□ 0.05
TMEM253-202ENST00000553744 C10orf71Q711Q0 1435 aa15.39■□□□□ 0.05
TMEM253-202ENST00000553744 FANCIQ9NVI1 1328 aa15.39■□□□□ 0.05
TMEM253-202ENST00000553744 RGL2O15211 777 aa15.38■□□□□ 0.05
TMEM253-202ENST00000553744 PROSER3Q2NL68 480 aa15.38■□□□□ 0.05
TMEM253-202ENST00000553744 C8orf58Q8NAV2 365 aa15.38■□□□□ 0.05
TMEM253-202ENST00000553744 ZNF652Q9Y2D9 606 aa15.38■□□□□ 0.05
TMEM253-202ENST00000553744 ELL2O00472 640 aaPredicted RBP15.37■□□□□ 0.05
TMEM253-202ENST00000553744 ANXA1P04083 346 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms