RNA–Protein interactions for RNA: ENST00000553509.1

ATL1-203, Transcript of atlastin GTPase 1, humanhuman

TSL 4

Gene ATL1, Length 527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-203ENST00000553509 C4AP0C0L4 1744 aa17.37■□□□□ 0.37
ATL1-203ENST00000553509 CHL1O00533 1208 aa17.36■□□□□ 0.37
ATL1-203ENST00000553509 RPS6KA4O75676 772 aa17.36■□□□□ 0.37
ATL1-203ENST00000553509 WWC1Q8IX03 1113 aa17.36■□□□□ 0.37
ATL1-203ENST00000553509 LAS1LQ9Y4W2 734 aaKnown RBP17.36■□□□□ 0.37
ATL1-203ENST00000553509 SRCAPQ6ZRS2 3230 aa17.36■□□□□ 0.37
ATL1-203ENST00000553509 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.35■□□□□ 0.37
ATL1-203ENST00000553509 EIF4A1P60842 406 aaKnown RBP17.35■□□□□ 0.37
ATL1-203ENST00000553509 COL24A1Q17RW2 1714 aa17.35■□□□□ 0.37
ATL1-203ENST00000553509 PHF14O94880 888 aa17.34■□□□□ 0.37
ATL1-203ENST00000553509 IL16Q14005 1332 aa17.34■□□□□ 0.37
ATL1-203ENST00000553509 MTFR1LQ9H019 292 aa17.34■□□□□ 0.37
ATL1-203ENST00000553509 SPON1Q9HCB6 807 aa17.34■□□□□ 0.37
ATL1-203ENST00000553509 TRAPPC3LQ5T215 181 aa17.33■□□□□ 0.36
ATL1-203ENST00000553509 INTS5Q6P9B9 1019 aaKnown RBP17.33■□□□□ 0.36
ATL1-203ENST00000553509 NPM2Q86SE8 214 aaKnown RBP17.33■□□□□ 0.36
ATL1-203ENST00000553509 COL23A1Q86Y22 540 aaPredicted RBP17.33■□□□□ 0.36
ATL1-203ENST00000553509 GIGYF1O75420 1035 aaPredicted RBP17.32■□□□□ 0.36
ATL1-203ENST00000553509 WDR63Q8IWG1 891 aa17.32■□□□□ 0.36
ATL1-203ENST00000553509 SOS1Q07889 1333 aaPredicted RBP17.31■□□□□ 0.36
ATL1-203ENST00000553509 ZNF853P0CG23 659 aa17.31■□□□□ 0.36
ATL1-203ENST00000553509 RFC4P35249 363 aa17.31■□□□□ 0.36
ATL1-203ENST00000553509 PDGFDQ9GZP0 370 aaPredicted RBP17.31■□□□□ 0.36
ATL1-203ENST00000553509 ZBTB1Q9Y2K1 713 aa17.31■□□□□ 0.36
ATL1-203ENST00000553509 SALL2Q9Y467 1007 aaPredicted RBP17.31■□□□□ 0.36
ATL1-203ENST00000553509 COL15A1P39059 1388 aa17.3■□□□□ 0.36
ATL1-203ENST00000553509 A0A087WZG4 1122 aa17.3■□□□□ 0.36
ATL1-203ENST00000553509 ZBTB7AO95365 584 aa17.3■□□□□ 0.36
ATL1-203ENST00000553509 HOXB7P09629 217 aa17.3■□□□□ 0.36
ATL1-203ENST00000553509 MBIPQ9NS73 344 aa17.3■□□□□ 0.36
ATL1-203ENST00000553509 USP16Q9Y5T5 823 aa17.3■□□□□ 0.36
ATL1-203ENST00000553509 ERBB4Q15303 1308 aa17.29■□□□□ 0.36
ATL1-203ENST00000553509 CANXP27824 592 aaKnown RBP17.29■□□□□ 0.36
ATL1-203ENST00000553509 IL6STP40189 918 aaPredicted RBP17.29■□□□□ 0.36
ATL1-203ENST00000553509 CHMP4AQ9BY43 222 aa17.29■□□□□ 0.36
ATL1-203ENST00000553509 SENP3-EIF4A1A0A087X0R7 540 aa17.28■□□□□ 0.36
ATL1-203ENST00000553509 AMIGO3Q86WK7 504 aa17.28■□□□□ 0.36
ATL1-203ENST00000553509 ARHGEF1Q92888 912 aaKnown RBP17.28■□□□□ 0.36
ATL1-203ENST00000553509 SCN7AQ01118 1682 aa17.28■□□□□ 0.36
ATL1-203ENST00000553509 PRAMEF22A3QJZ6 481 aa17.27■□□□□ 0.36
ATL1-203ENST00000553509 A1BGP04217 495 aa17.27■□□□□ 0.36
ATL1-203ENST00000553509 POLD1P28340 1107 aa17.27■□□□□ 0.36
ATL1-203ENST00000553509 BCORQ6W2J9 1755 aa17.27■□□□□ 0.35
ATL1-203ENST00000553509 CACNA1FO60840 1977 aa17.26■□□□□ 0.35
ATL1-203ENST00000553509 ZPR1O75312 459 aa17.26■□□□□ 0.35
ATL1-203ENST00000553509 EIF5P55010 431 aaKnown RBP17.26■□□□□ 0.35
ATL1-203ENST00000553509 MYH16Q9H6N6 1097 aa17.26■□□□□ 0.35
ATL1-203ENST00000553509 ATF5Q9Y2D1 282 aaPredicted RBP17.26■□□□□ 0.35
ATL1-203ENST00000553509 USP42Q9H9J4 1324 aaKnown RBP17.25■□□□□ 0.35
ATL1-203ENST00000553509 NLGN1Q8N2Q7 840 aa17.25■□□□□ 0.35
ATL1-203ENST00000553509 PPP1R1BQ9UD71 204 aaPredicted RBP17.25■□□□□ 0.35
ATL1-203ENST00000553509 ZNF330Q9Y3S2 320 aaPredicted RBP17.25■□□□□ 0.35
ATL1-203ENST00000553509 ZNF521Q96K83 1311 aa17.24■□□□□ 0.35
ATL1-203ENST00000553509 DUSP27Q5VZP5 1158 aa17.24■□□□□ 0.35
ATL1-203ENST00000553509 SMIM5Q71RC9 77 aa17.24■□□□□ 0.35
ATL1-203ENST00000553509 NARFQ9UHQ1 456 aa17.24■□□□□ 0.35
ATL1-203ENST00000553509 EIF2S2P20042 333 aaKnown RBP17.23■□□□□ 0.35
ATL1-203ENST00000553509 GOLGA2Q08379 1002 aa17.23■□□□□ 0.35
ATL1-203ENST00000553509 HDGFL1Q5TGJ6 251 aa17.23■□□□□ 0.35
ATL1-203ENST00000553509 MSL1Q68DK7 614 aa17.23■□□□□ 0.35
ATL1-203ENST00000553509 FANCIQ9NVI1 1328 aa17.22■□□□□ 0.35
ATL1-203ENST00000553509 GYS1P13807 737 aa17.22■□□□□ 0.35
ATL1-203ENST00000553509 PTGER2P43116 358 aa17.22■□□□□ 0.35
ATL1-203ENST00000553509 TSR2Q969E8 191 aaKnown RBP17.22■□□□□ 0.35
ATL1-203ENST00000553509 SGIP1Q9BQI5 828 aa17.22■□□□□ 0.35
ATL1-203ENST00000553509 NBPF26B4DH59 902 aa17.21■□□□□ 0.35
ATL1-203ENST00000553509 RGL2O15211 777 aa17.21■□□□□ 0.35
ATL1-203ENST00000553509 KRT24Q2M2I5 525 aa17.21■□□□□ 0.35
ATL1-203ENST00000553509 NBPF10Q6P3W6 841 aaKnown RBP17.21■□□□□ 0.35
ATL1-203ENST00000553509 DZIP3Q86Y13 1208 aaKnown RBP17.21■□□□□ 0.35
ATL1-203ENST00000553509 NBPF15Q8N660 670 aa17.21■□□□□ 0.35
ATL1-203ENST00000553509 NUP98P52948 1817 aa17.2■□□□□ 0.34
ATL1-203ENST00000553509 E9PSI1 815 aa17.2■□□□□ 0.34
ATL1-203ENST00000553509 PIP4K2AP48426 406 aaPredicted RBP17.2■□□□□ 0.34
ATL1-203ENST00000553509 USPL1Q5W0Q7 1092 aa17.2■□□□□ 0.34
ATL1-203ENST00000553509 ARXQ96QS3 562 aa17.2■□□□□ 0.34
ATL1-203ENST00000553509 DDX21Q9NR30 783 aaKnown RBP eCLIP17.2■□□□□ 0.34
ATL1-203ENST00000553509 SRP68Q9UHB9 627 aaKnown RBP17.2■□□□□ 0.34
ATL1-203ENST00000553509 ZNF652Q9Y2D9 606 aa17.2■□□□□ 0.34
ATL1-203ENST00000553509 MYL6BP14649 208 aa17.19■□□□□ 0.34
ATL1-203ENST00000553509 KIF6Q6ZMV9 814 aa17.19■□□□□ 0.34
ATL1-203ENST00000553509 DBF4Q9UBU7 674 aaPredicted RBP17.19■□□□□ 0.34
ATL1-203ENST00000553509 HNRNPUQ00839 825 aaKnown RBP eCLIP17.18■□□□□ 0.34
ATL1-203ENST00000553509 MAPK8IP2Q13387 824 aaPredicted RBP17.18■□□□□ 0.34
ATL1-203ENST00000553509 TWISTNBQ3B726 338 aaPredicted RBP17.18■□□□□ 0.34
ATL1-203ENST00000553509 CCDC30Q5VVM6 783 aa17.18■□□□□ 0.34
ATL1-203ENST00000553509 C8orf58Q8NAV2 365 aa17.18■□□□□ 0.34
ATL1-203ENST00000553509 NECTIN2Q92692 538 aa17.18■□□□□ 0.34
ATL1-203ENST00000553509 TBC1D2BQ9UPU7 963 aa17.18■□□□□ 0.34
ATL1-203ENST00000553509 ELL2O00472 640 aaPredicted RBP17.17■□□□□ 0.34
ATL1-203ENST00000553509 MMP10P09238 476 aa17.17■□□□□ 0.34
ATL1-203ENST00000553509 FKBP8Q14318 412 aa17.17■□□□□ 0.34
ATL1-203ENST00000553509 CLEC4GQ6UXB4 293 aa17.17■□□□□ 0.34
ATL1-203ENST00000553509 HYPKQ9NX55 129 aa17.17■□□□□ 0.34
ATL1-203ENST00000553509 PARP3Q9Y6F1 533 aa17.17■□□□□ 0.34
ATL1-203ENST00000553509 ANKRD36CQ5JPF3 1778 aa17.17■□□□□ 0.34
ATL1-203ENST00000553509 AFDNP55196 1824 aaKnown RBP17.17■□□□□ 0.34
ATL1-203ENST00000553509 CAMTA2O94983 1202 aa17.16■□□□□ 0.34
ATL1-203ENST00000553509 PDIA6Q15084 440 aa17.16■□□□□ 0.34
ATL1-203ENST00000553509 STK31Q9BXU1 1019 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms