RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 SMIM5Q71RC9 77 aa24.23■■□□□ 1.47
CPSF2-202ENST00000553427 C4AP0C0L4 1744 aa24.22■■□□□ 1.47
CPSF2-202ENST00000553427 APAF1O14727 1248 aa24.22■■□□□ 1.47
CPSF2-202ENST00000553427 SNRPA1P09661 255 aaKnown RBP24.22■■□□□ 1.47
CPSF2-202ENST00000553427 ARHGEF1Q92888 912 aaKnown RBP24.22■■□□□ 1.47
CPSF2-202ENST00000553427 NEUROD2Q15784 382 aa24.21■■□□□ 1.47
CPSF2-202ENST00000553427 ARXQ96QS3 562 aa24.21■■□□□ 1.47
CPSF2-202ENST00000553427 ZBTB1Q9Y2K1 713 aa24.21■■□□□ 1.47
CPSF2-202ENST00000553427 MIS18AQ9NYP9 233 aa24.2■■□□□ 1.46
CPSF2-202ENST00000553427 RFC4P35249 363 aa24.19■■□□□ 1.46
CPSF2-202ENST00000553427 NCBP3Q53F19 620 aaKnown RBP24.19■■□□□ 1.46
CPSF2-202ENST00000553427 COL15A1P39059 1388 aa24.18■■□□□ 1.46
CPSF2-202ENST00000553427 EIF4A1P60842 406 aaKnown RBP24.18■■□□□ 1.46
CPSF2-202ENST00000553427 MSL1Q68DK7 614 aa24.18■■□□□ 1.46
CPSF2-202ENST00000553427 TSPYL4Q9UJ04 414 aa24.18■■□□□ 1.46
CPSF2-202ENST00000553427 USP42Q9H9J4 1324 aaKnown RBP24.17■■□□□ 1.46
CPSF2-202ENST00000553427 LAMB4A4D0S4 1761 aa24.17■■□□□ 1.46
CPSF2-202ENST00000553427 CHL1O00533 1208 aa24.16■■□□□ 1.46
CPSF2-202ENST00000553427 EIF5P55010 431 aaKnown RBP24.16■■□□□ 1.46
CPSF2-202ENST00000553427 NLGN1Q8N2Q7 840 aa24.16■■□□□ 1.46
CPSF2-202ENST00000553427 GIGYF1O75420 1035 aaPredicted RBP24.15■■□□□ 1.46
CPSF2-202ENST00000553427 GYS1P13807 737 aa24.15■■□□□ 1.46
CPSF2-202ENST00000553427 IL6STP40189 918 aaPredicted RBP24.15■■□□□ 1.46
CPSF2-202ENST00000553427 CALD1Q05682 793 aaKnown RBP24.15■■□□□ 1.46
CPSF2-202ENST00000553427 CCDC27Q2M243 656 aa24.15■■□□□ 1.46
CPSF2-202ENST00000553427 USP16Q9Y5T5 823 aa24.15■■□□□ 1.46
CPSF2-202ENST00000553427 PRAMEF22A3QJZ6 481 aa24.14■■□□□ 1.45
CPSF2-202ENST00000553427 A0A087WZG4 1122 aa24.13■■□□□ 1.45
CPSF2-202ENST00000553427 CANXP27824 592 aaKnown RBP24.13■■□□□ 1.45
CPSF2-202ENST00000553427 CFAP44Q96MT7 982 aa24.13■■□□□ 1.45
CPSF2-202ENST00000553427 A1BGP04217 495 aa24.12■■□□□ 1.45
CPSF2-202ENST00000553427 FHDC1Q9C0D6 1143 aaPredicted RBP24.12■■□□□ 1.45
CPSF2-202ENST00000553427 NARFQ9UHQ1 456 aa24.12■■□□□ 1.45
CPSF2-202ENST00000553427 CCER2I3L3R5 266 aa24.11■■□□□ 1.45
CPSF2-202ENST00000553427 SRP68Q9UHB9 627 aaKnown RBP24.11■■□□□ 1.45
CPSF2-202ENST00000553427 ZPR1O75312 459 aa24.1■■□□□ 1.45
CPSF2-202ENST00000553427 ZNF853P0CG23 659 aa24.1■■□□□ 1.45
CPSF2-202ENST00000553427 IFT57Q9NWB7 429 aa24.1■■□□□ 1.45
CPSF2-202ENST00000553427 SCN7AQ01118 1682 aa24.09■■□□□ 1.45
CPSF2-202ENST00000553427 MMP10P09238 476 aa24.09■■□□□ 1.45
CPSF2-202ENST00000553427 SYT17Q9BSW7 474 aa24.09■■□□□ 1.45
CPSF2-202ENST00000553427 ERBB4Q15303 1308 aa24.09■■□□□ 1.45
CPSF2-202ENST00000553427 NBPF26B4DH59 902 aa24.07■■□□□ 1.44
CPSF2-202ENST00000553427 GNAI1P63096 354 aa24.07■■□□□ 1.44
CPSF2-202ENST00000553427 FKBP8Q14318 412 aa24.07■■□□□ 1.44
CPSF2-202ENST00000553427 USPL1Q5W0Q7 1092 aa24.07■■□□□ 1.44
CPSF2-202ENST00000553427 NBPF10Q6P3W6 841 aaKnown RBP24.07■■□□□ 1.44
CPSF2-202ENST00000553427 NGEFQ8N5V2 710 aa24.07■■□□□ 1.44
CPSF2-202ENST00000553427 NBPF15Q8N660 670 aa24.07■■□□□ 1.44
CPSF2-202ENST00000553427 WWC1Q8IX03 1113 aa24.06■■□□□ 1.44
CPSF2-202ENST00000553427 FAM9BQ8IZU0 186 aa24.06■■□□□ 1.44
CPSF2-202ENST00000553427 CD2APQ9Y5K6 639 aa24.06■■□□□ 1.44
CPSF2-202ENST00000553427 RGL2O15211 777 aa24.05■■□□□ 1.44
CPSF2-202ENST00000553427 HOXB7P09629 217 aa24.05■■□□□ 1.44
CPSF2-202ENST00000553427 NPM2Q86SE8 214 aaKnown RBP24.05■■□□□ 1.44
CPSF2-202ENST00000553427 BCL2L12Q9HB09 334 aa24.05■■□□□ 1.44
CPSF2-202ENST00000553427 MBIPQ9NS73 344 aa24.05■■□□□ 1.44
CPSF2-202ENST00000553427 LAS1LQ9Y4W2 734 aaKnown RBP24.05■■□□□ 1.44
CPSF2-202ENST00000553427 IL16Q14005 1332 aa24.05■■□□□ 1.44
CPSF2-202ENST00000553427 DIEXFQ68CQ4 756 aaKnown RBP24.04■■□□□ 1.44
CPSF2-202ENST00000553427 TM4SF1P30408 202 aa24.03■■□□□ 1.44
CPSF2-202ENST00000553427 BCORQ6W2J9 1755 aa24.03■■□□□ 1.44
CPSF2-202ENST00000553427 C10orf71Q711Q0 1435 aa24.02■■□□□ 1.44
CPSF2-202ENST00000553427 CAMTA2O94983 1202 aa24.02■■□□□ 1.44
CPSF2-202ENST00000553427 DZIP3Q86Y13 1208 aaKnown RBP24.02■■□□□ 1.44
CPSF2-202ENST00000553427 ZNF330Q9Y3S2 320 aaPredicted RBP24.02■■□□□ 1.44
CPSF2-202ENST00000553427 PARP3Q9Y6F1 533 aa24.02■■□□□ 1.44
CPSF2-202ENST00000553427 PIP4K2AP48426 406 aaPredicted RBP24.01■■□□□ 1.43
CPSF2-202ENST00000553427 DDR1Q08345 913 aa24.01■■□□□ 1.43
CPSF2-202ENST00000553427 TBC1D2BQ9UPU7 963 aa24■■□□□ 1.43
CPSF2-202ENST00000553427 KIF13BQ9NQT8 1826 aa24■■□□□ 1.43
CPSF2-202ENST00000553427 POLRMTO00411 1230 aaKnown RBP23.99■■□□□ 1.43
CPSF2-202ENST00000553427 NFIXQ14938 502 aa23.99■■□□□ 1.43
CPSF2-202ENST00000553427 WDR63Q8IWG1 891 aa23.99■■□□□ 1.43
CPSF2-202ENST00000553427 KRT24Q2M2I5 525 aa23.98■■□□□ 1.43
CPSF2-202ENST00000553427 CLEC4GQ6UXB4 293 aa23.98■■□□□ 1.43
CPSF2-202ENST00000553427 KLHL34Q8N239 644 aa23.98■■□□□ 1.43
CPSF2-202ENST00000553427 PDIA6Q15084 440 aa23.97■■□□□ 1.43
CPSF2-202ENST00000553427 LRP10Q7Z4F1 713 aa23.97■■□□□ 1.43
CPSF2-202ENST00000553427 NLGN2Q8NFZ4 835 aa23.97■■□□□ 1.43
CPSF2-202ENST00000553427 NRXN2Q9P2S2 1712 aa23.97■■□□□ 1.43
CPSF2-202ENST00000553427 ZNF652Q9Y2D9 606 aa23.96■■□□□ 1.43
CPSF2-202ENST00000553427 EIF2S2P20042 333 aaKnown RBP23.95■■□□□ 1.42
CPSF2-202ENST00000553427 DUSP27Q5VZP5 1158 aa23.95■■□□□ 1.42
CPSF2-202ENST00000553427 CARMIL3Q8ND23 1372 aa23.94■■□□□ 1.42
CPSF2-202ENST00000553427 ERVV-1B6SEH8 477 aa23.94■■□□□ 1.42
CPSF2-202ENST00000553427 TBC1D9BQ66K14 1250 aa23.94■■□□□ 1.42
CPSF2-202ENST00000553427 MAP3K15Q6ZN16 1313 aa23.93■■□□□ 1.42
CPSF2-202ENST00000553427 SENP3-EIF4A1A0A087X0R7 540 aa23.93■■□□□ 1.42
CPSF2-202ENST00000553427 MYL6BP14649 208 aa23.93■■□□□ 1.42
CPSF2-202ENST00000553427 HDGFL1Q5TGJ6 251 aa23.93■■□□□ 1.42
CPSF2-202ENST00000553427 DDX21Q9NR30 783 aaKnown RBP eCLIP23.93■■□□□ 1.42
CPSF2-202ENST00000553427 ZNF521Q96K83 1311 aa23.92■■□□□ 1.42
CPSF2-202ENST00000553427 DCAF8L1A6NGE4 600 aa23.92■■□□□ 1.42
CPSF2-202ENST00000553427 TGFB2P61812 414 aa23.92■■□□□ 1.42
CPSF2-202ENST00000553427 CHMP4AQ9BY43 222 aa23.92■■□□□ 1.42
CPSF2-202ENST00000553427 KIAA1551Q9HCM1 1747 aa23.92■■□□□ 1.42
CPSF2-202ENST00000553427 PXDNLA1KZ92 1463 aa23.92■■□□□ 1.42
CPSF2-202ENST00000553427 SERPINB2P05120 415 aa23.91■■□□□ 1.42
CPSF2-202ENST00000553427 PROSER3Q2NL68 480 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms