RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 STARD3NLO95772 234 aa23.1■■□□□ 1.29
RAPGEF3-220ENST00000549347 ZNF853P0CG23 659 aa23.1■■□□□ 1.29
RAPGEF3-220ENST00000549347 COL23A1Q86Y22 540 aaPredicted RBP23.1■■□□□ 1.29
RAPGEF3-220ENST00000549347 IFT57Q9NWB7 429 aa23.1■■□□□ 1.29
RAPGEF3-220ENST00000549347 RPS6KA4O75676 772 aa23.09■■□□□ 1.29
RAPGEF3-220ENST00000549347 ADRA2BP18089 450 aa23.09■■□□□ 1.29
RAPGEF3-220ENST00000549347 RTCBQ9Y3I0 505 aaKnown RBP23.09■■□□□ 1.29
RAPGEF3-220ENST00000549347 SENP3-EIF4A1A0A087X0R7 540 aa23.08■■□□□ 1.29
RAPGEF3-220ENST00000549347 PHF14O94880 888 aa23.08■■□□□ 1.29
RAPGEF3-220ENST00000549347 SLC16A10Q8TF71 515 aa23.08■■□□□ 1.29
RAPGEF3-220ENST00000549347 SOS1Q07889 1333 aaPredicted RBP23.08■■□□□ 1.28
RAPGEF3-220ENST00000549347 PRAMEF22A3QJZ6 481 aa23.07■■□□□ 1.28
RAPGEF3-220ENST00000549347 GIGYF1O75420 1035 aaPredicted RBP23.07■■□□□ 1.28
RAPGEF3-220ENST00000549347 MTFR1LQ9H019 292 aa23.07■■□□□ 1.28
RAPGEF3-220ENST00000549347 ZBTB1Q9Y2K1 713 aa23.07■■□□□ 1.28
RAPGEF3-220ENST00000549347 LAS1LQ9Y4W2 734 aaKnown RBP23.07■■□□□ 1.28
RAPGEF3-220ENST00000549347 IL16Q14005 1332 aa23.07■■□□□ 1.28
RAPGEF3-220ENST00000549347 GNAI1P63096 354 aa23.06■■□□□ 1.28
RAPGEF3-220ENST00000549347 SMIM5Q71RC9 77 aa23.06■■□□□ 1.28
RAPGEF3-220ENST00000549347 ZBTB7AO95365 584 aa23.05■■□□□ 1.28
RAPGEF3-220ENST00000549347 MBIPQ9NS73 344 aa23.05■■□□□ 1.28
RAPGEF3-220ENST00000549347 USP16Q9Y5T5 823 aa23.05■■□□□ 1.28
RAPGEF3-220ENST00000549347 SCN7AQ01118 1682 aa23.05■■□□□ 1.28
RAPGEF3-220ENST00000549347 COL15A1P39059 1388 aa23.04■■□□□ 1.28
RAPGEF3-220ENST00000549347 TRAPPC3LQ5T215 181 aa23.03■■□□□ 1.28
RAPGEF3-220ENST00000549347 WDR63Q8IWG1 891 aa23.03■■□□□ 1.28
RAPGEF3-220ENST00000549347 SPON1Q9HCB6 807 aa23.03■■□□□ 1.28
RAPGEF3-220ENST00000549347 BCORQ6W2J9 1755 aa23.03■■□□□ 1.28
RAPGEF3-220ENST00000549347 ZNF521Q96K83 1311 aa23.03■■□□□ 1.28
RAPGEF3-220ENST00000549347 MSH5O43196 834 aa23.02■■□□□ 1.28
RAPGEF3-220ENST00000549347 ARHGEF1Q92888 912 aaKnown RBP23.02■■□□□ 1.28
RAPGEF3-220ENST00000549347 SALL2Q9Y467 1007 aaPredicted RBP23.02■■□□□ 1.28
RAPGEF3-220ENST00000549347 A1BGP04217 495 aa23.01■■□□□ 1.27
RAPGEF3-220ENST00000549347 CANXP27824 592 aaKnown RBP23■■□□□ 1.27
RAPGEF3-220ENST00000549347 IL6STP40189 918 aaPredicted RBP23■■□□□ 1.27
RAPGEF3-220ENST00000549347 EIF5P55010 431 aaKnown RBP23■■□□□ 1.27
RAPGEF3-220ENST00000549347 SGIP1Q9BQI5 828 aa23■■□□□ 1.27
RAPGEF3-220ENST00000549347 HOXB7P09629 217 aa22.99■■□□□ 1.27
RAPGEF3-220ENST00000549347 PTGER2P43116 358 aa22.99■■□□□ 1.27
RAPGEF3-220ENST00000549347 KRT24Q2M2I5 525 aa22.99■■□□□ 1.27
RAPGEF3-220ENST00000549347 ERBB4Q15303 1308 aa22.99■■□□□ 1.27
RAPGEF3-220ENST00000549347 USP42Q9H9J4 1324 aaKnown RBP22.99■■□□□ 1.27
RAPGEF3-220ENST00000549347 RFC4P35249 363 aa22.98■■□□□ 1.27
RAPGEF3-220ENST00000549347 ATF5Q9Y2D1 282 aaPredicted RBP22.98■■□□□ 1.27
RAPGEF3-220ENST00000549347 NBPF26B4DH59 902 aa22.97■■□□□ 1.27
RAPGEF3-220ENST00000549347 NBPF10Q6P3W6 841 aaKnown RBP22.97■■□□□ 1.27
RAPGEF3-220ENST00000549347 NBPF15Q8N660 670 aa22.97■■□□□ 1.27
RAPGEF3-220ENST00000549347 A0A087WZG4 1122 aa22.95■■□□□ 1.26
RAPGEF3-220ENST00000549347 MSL1Q68DK7 614 aa22.95■■□□□ 1.26
RAPGEF3-220ENST00000549347 TSR2Q969E8 191 aaKnown RBP22.95■■□□□ 1.26
RAPGEF3-220ENST00000549347 FANCIQ9NVI1 1328 aa22.95■■□□□ 1.26
RAPGEF3-220ENST00000549347 GYS1P13807 737 aa22.94■■□□□ 1.26
RAPGEF3-220ENST00000549347 PIP4K2AP48426 406 aaPredicted RBP22.94■■□□□ 1.26
RAPGEF3-220ENST00000549347 SRP68Q9UHB9 627 aaKnown RBP22.94■■□□□ 1.26
RAPGEF3-220ENST00000549347 NARFQ9UHQ1 456 aa22.94■■□□□ 1.26
RAPGEF3-220ENST00000549347 DUSP27Q5VZP5 1158 aa22.93■■□□□ 1.26
RAPGEF3-220ENST00000549347 SPINK5Q9NQ38 1064 aaPredicted RBP22.92■■□□□ 1.26
RAPGEF3-220ENST00000549347 ZNF330Q9Y3S2 320 aaPredicted RBP22.92■■□□□ 1.26
RAPGEF3-220ENST00000549347 ZPR1O75312 459 aa22.91■■□□□ 1.26
RAPGEF3-220ENST00000549347 EIF2S2P20042 333 aaKnown RBP22.91■■□□□ 1.26
RAPGEF3-220ENST00000549347 POLD1P28340 1107 aa22.91■■□□□ 1.26
RAPGEF3-220ENST00000549347 USPL1Q5W0Q7 1092 aa22.91■■□□□ 1.26
RAPGEF3-220ENST00000549347 C8orf58Q8NAV2 365 aa22.91■■□□□ 1.26
RAPGEF3-220ENST00000549347 PDIA6Q15084 440 aa22.9■■□□□ 1.26
RAPGEF3-220ENST00000549347 HDGFL1Q5TGJ6 251 aa22.9■■□□□ 1.26
RAPGEF3-220ENST00000549347 LRP10Q7Z4F1 713 aa22.9■■□□□ 1.26
RAPGEF3-220ENST00000549347 NPM2Q86SE8 214 aaKnown RBP22.9■■□□□ 1.26
RAPGEF3-220ENST00000549347 NLGN1Q8N2Q7 840 aa22.9■■□□□ 1.26
RAPGEF3-220ENST00000549347 MYH16Q9H6N6 1097 aa22.9■■□□□ 1.26
RAPGEF3-220ENST00000549347 SRCAPQ6ZRS2 3230 aa22.89■■□□□ 1.26
RAPGEF3-220ENST00000549347 DZIP3Q86Y13 1208 aaKnown RBP22.89■■□□□ 1.25
RAPGEF3-220ENST00000549347 BCL2L12Q9HB09 334 aa22.89■■□□□ 1.25
RAPGEF3-220ENST00000549347 CAMTA2O94983 1202 aa22.88■■□□□ 1.25
RAPGEF3-220ENST00000549347 GOLGA2Q08379 1002 aa22.88■■□□□ 1.25
RAPGEF3-220ENST00000549347 FKBP8Q14318 412 aa22.88■■□□□ 1.25
RAPGEF3-220ENST00000549347 TSPYL6Q8N831 410 aa22.88■■□□□ 1.25
RAPGEF3-220ENST00000549347 ARXQ96QS3 562 aa22.88■■□□□ 1.25
RAPGEF3-220ENST00000549347 NRXN2Q9P2S2 1712 aa22.88■■□□□ 1.25
RAPGEF3-220ENST00000549347 RGL2O15211 777 aa22.87■■□□□ 1.25
RAPGEF3-220ENST00000549347 MYL6BP14649 208 aa22.87■■□□□ 1.25
RAPGEF3-220ENST00000549347 PROSER3Q2NL68 480 aa22.87■■□□□ 1.25
RAPGEF3-220ENST00000549347 NECTIN2Q92692 538 aa22.87■■□□□ 1.25
RAPGEF3-220ENST00000549347 DDX21Q9NR30 783 aaKnown RBP eCLIP22.87■■□□□ 1.25
RAPGEF3-220ENST00000549347 PPP1R1BQ9UD71 204 aaPredicted RBP22.87■■□□□ 1.25
RAPGEF3-220ENST00000549347 TBC1D2BQ9UPU7 963 aa22.87■■□□□ 1.25
RAPGEF3-220ENST00000549347 KIF13BQ9NQT8 1826 aa22.87■■□□□ 1.25
RAPGEF3-220ENST00000549347 E9PSI1 815 aa22.86■■□□□ 1.25
RAPGEF3-220ENST00000549347 ELL2O00472 640 aaPredicted RBP22.86■■□□□ 1.25
RAPGEF3-220ENST00000549347 MMP10P09238 476 aa22.86■■□□□ 1.25
RAPGEF3-220ENST00000549347 CHPF2Q9P2E5 772 aa22.86■■□□□ 1.25
RAPGEF3-220ENST00000549347 NUP98P52948 1817 aa22.86■■□□□ 1.25
RAPGEF3-220ENST00000549347 AFDNP55196 1824 aaKnown RBP22.85■■□□□ 1.25
RAPGEF3-220ENST00000549347 TWISTNBQ3B726 338 aaPredicted RBP22.85■■□□□ 1.25
RAPGEF3-220ENST00000549347 ANKRD36CQ5JPF3 1778 aa22.84■■□□□ 1.25
RAPGEF3-220ENST00000549347 CHMP4AQ9BY43 222 aa22.84■■□□□ 1.25
RAPGEF3-220ENST00000549347 DBF4Q9UBU7 674 aaPredicted RBP22.84■■□□□ 1.25
RAPGEF3-220ENST00000549347 CACNA1FO60840 1977 aa22.83■■□□□ 1.25
RAPGEF3-220ENST00000549347 ANXA1P04083 346 aa22.83■■□□□ 1.25
RAPGEF3-220ENST00000549347 TM4SF1P30408 202 aa22.83■■□□□ 1.25
RAPGEF3-220ENST00000549347 HNRNPUQ00839 825 aaKnown RBP eCLIP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms