RNA–Protein interactions for RNA: ENST00000542933.5

LINC01089-209, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 3 BASIC

Gene LINC01089, Length 1,220 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-209ENST00000542933 MIER1Q8N108 512 aa20.23■□□□□ 0.83
LINC01089-209ENST00000542933 TSPYL4Q9UJ04 414 aa20.23■□□□□ 0.83
LINC01089-209ENST00000542933 SNRPA1P09661 255 aaKnown RBP20.22■□□□□ 0.83
LINC01089-209ENST00000542933 INTS5Q6P9B9 1019 aaKnown RBP20.22■□□□□ 0.83
LINC01089-209ENST00000542933 ATF5Q9Y2D1 282 aaPredicted RBP20.22■□□□□ 0.83
LINC01089-209ENST00000542933 CALD1Q05682 793 aaKnown RBP20.21■□□□□ 0.83
LINC01089-209ENST00000542933 NCBP3Q53F19 620 aaKnown RBP20.21■□□□□ 0.83
LINC01089-209ENST00000542933 TRAPPC3LQ5T215 181 aa20.21■□□□□ 0.83
LINC01089-209ENST00000542933 SMIM5Q71RC9 77 aa20.21■□□□□ 0.83
LINC01089-209ENST00000542933 ZBTB1Q9Y2K1 713 aa20.21■□□□□ 0.83
LINC01089-209ENST00000542933 PTGER2P43116 358 aa20.2■□□□□ 0.82
LINC01089-209ENST00000542933 EIF4A1P60842 406 aaKnown RBP20.2■□□□□ 0.82
LINC01089-209ENST00000542933 SGIP1Q9BQI5 828 aa20.2■□□□□ 0.82
LINC01089-209ENST00000542933 SOS1Q07889 1333 aaPredicted RBP20.2■□□□□ 0.82
LINC01089-209ENST00000542933 CCDC27Q2M243 656 aa20.19■□□□□ 0.82
LINC01089-209ENST00000542933 COL15A1P39059 1388 aa20.19■□□□□ 0.82
LINC01089-209ENST00000542933 CHL1O00533 1208 aa20.18■□□□□ 0.82
LINC01089-209ENST00000542933 ARHGEF1Q92888 912 aaKnown RBP20.18■□□□□ 0.82
LINC01089-209ENST00000542933 PRAMEF22A3QJZ6 481 aa20.17■□□□□ 0.82
LINC01089-209ENST00000542933 GIGYF1O75420 1035 aaPredicted RBP20.17■□□□□ 0.82
LINC01089-209ENST00000542933 POLD1P28340 1107 aa20.17■□□□□ 0.82
LINC01089-209ENST00000542933 RFC4P35249 363 aa20.17■□□□□ 0.82
LINC01089-209ENST00000542933 CFAP44Q96MT7 982 aa20.17■□□□□ 0.82
LINC01089-209ENST00000542933 PPP1R1BQ9UD71 204 aaPredicted RBP20.17■□□□□ 0.82
LINC01089-209ENST00000542933 USP16Q9Y5T5 823 aa20.17■□□□□ 0.82
LINC01089-209ENST00000542933 MSL1Q68DK7 614 aa20.16■□□□□ 0.82
LINC01089-209ENST00000542933 IFT57Q9NWB7 429 aa20.16■□□□□ 0.82
LINC01089-209ENST00000542933 LAS1LQ9Y4W2 734 aaKnown RBP20.16■□□□□ 0.82
LINC01089-209ENST00000542933 CANXP27824 592 aaKnown RBP20.15■□□□□ 0.82
LINC01089-209ENST00000542933 USP42Q9H9J4 1324 aaKnown RBP20.15■□□□□ 0.82
LINC01089-209ENST00000542933 SCN7AQ01118 1682 aa20.14■□□□□ 0.81
LINC01089-209ENST00000542933 ZNF853P0CG23 659 aa20.14■□□□□ 0.81
LINC01089-209ENST00000542933 IL6STP40189 918 aaPredicted RBP20.14■□□□□ 0.81
LINC01089-209ENST00000542933 EIF5P55010 431 aaKnown RBP20.14■□□□□ 0.81
LINC01089-209ENST00000542933 GNAI1P63096 354 aa20.14■□□□□ 0.81
LINC01089-209ENST00000542933 WWC1Q8IX03 1113 aa20.14■□□□□ 0.81
LINC01089-209ENST00000542933 NGEFQ8N5V2 710 aa20.14■□□□□ 0.81
LINC01089-209ENST00000542933 A1BGP04217 495 aa20.13■□□□□ 0.81
LINC01089-209ENST00000542933 ARXQ96QS3 562 aa20.13■□□□□ 0.81
LINC01089-209ENST00000542933 A0A087WZG4 1122 aa20.12■□□□□ 0.81
LINC01089-209ENST00000542933 SENP3-EIF4A1A0A087X0R7 540 aa20.12■□□□□ 0.81
LINC01089-209ENST00000542933 GYS1P13807 737 aa20.12■□□□□ 0.81
LINC01089-209ENST00000542933 NPM2Q86SE8 214 aaKnown RBP20.12■□□□□ 0.81
LINC01089-209ENST00000542933 MBIPQ9NS73 344 aa20.12■□□□□ 0.81
LINC01089-209ENST00000542933 BCORQ6W2J9 1755 aa20.11■□□□□ 0.81
LINC01089-209ENST00000542933 IL16Q14005 1332 aa20.11■□□□□ 0.81
LINC01089-209ENST00000542933 ZPR1O75312 459 aa20.11■□□□□ 0.81
LINC01089-209ENST00000542933 NLGN1Q8N2Q7 840 aa20.11■□□□□ 0.81
LINC01089-209ENST00000542933 NARFQ9UHQ1 456 aa20.11■□□□□ 0.81
LINC01089-209ENST00000542933 SRP68Q9UHB9 627 aaKnown RBP20.1■□□□□ 0.81
LINC01089-209ENST00000542933 ZNF330Q9Y3S2 320 aaPredicted RBP20.1■□□□□ 0.81
LINC01089-209ENST00000542933 ERBB4Q15303 1308 aa20.09■□□□□ 0.81
LINC01089-209ENST00000542933 HOXB7P09629 217 aa20.08■□□□□ 0.81
LINC01089-209ENST00000542933 PIP4K2AP48426 406 aaPredicted RBP20.08■□□□□ 0.81
LINC01089-209ENST00000542933 USPL1Q5W0Q7 1092 aa20.08■□□□□ 0.81
LINC01089-209ENST00000542933 SALL2Q9Y467 1007 aaPredicted RBP20.08■□□□□ 0.81
LINC01089-209ENST00000542933 NBPF26B4DH59 902 aa20.07■□□□□ 0.8
LINC01089-209ENST00000542933 MMP10P09238 476 aa20.07■□□□□ 0.8
LINC01089-209ENST00000542933 NBPF10Q6P3W6 841 aaKnown RBP20.07■□□□□ 0.8
LINC01089-209ENST00000542933 WDR63Q8IWG1 891 aa20.07■□□□□ 0.8
LINC01089-209ENST00000542933 NBPF15Q8N660 670 aa20.07■□□□□ 0.8
LINC01089-209ENST00000542933 FKBP8Q14318 412 aa20.06■□□□□ 0.8
LINC01089-209ENST00000542933 KRT24Q2M2I5 525 aa20.06■□□□□ 0.8
LINC01089-209ENST00000542933 FHDC1Q9C0D6 1143 aaPredicted RBP20.06■□□□□ 0.8
LINC01089-209ENST00000542933 EIF2S2P20042 333 aaKnown RBP20.05■□□□□ 0.8
LINC01089-209ENST00000542933 DZIP3Q86Y13 1208 aaKnown RBP20.05■□□□□ 0.8
LINC01089-209ENST00000542933 TBC1D2BQ9UPU7 963 aa20.05■□□□□ 0.8
LINC01089-209ENST00000542933 CAMTA2O94983 1202 aa20.03■□□□□ 0.8
LINC01089-209ENST00000542933 HDGFL1Q5TGJ6 251 aa20.03■□□□□ 0.8
LINC01089-209ENST00000542933 DUSP27Q5VZP5 1158 aa20.03■□□□□ 0.8
LINC01089-209ENST00000542933 TSR2Q969E8 191 aaKnown RBP20.03■□□□□ 0.8
LINC01089-209ENST00000542933 BCL2L12Q9HB09 334 aa20.03■□□□□ 0.8
LINC01089-209ENST00000542933 ZNF521Q96K83 1311 aa20.02■□□□□ 0.8
LINC01089-209ENST00000542933 KIF13BQ9NQT8 1826 aa20.02■□□□□ 0.8
LINC01089-209ENST00000542933 RGL2O15211 777 aa20.02■□□□□ 0.8
LINC01089-209ENST00000542933 MYL6BP14649 208 aa20.02■□□□□ 0.8
LINC01089-209ENST00000542933 SYT17Q9BSW7 474 aa20.02■□□□□ 0.8
LINC01089-209ENST00000542933 PARP3Q9Y6F1 533 aa20.02■□□□□ 0.8
LINC01089-209ENST00000542933 KLHL34Q8N239 644 aa20.01■□□□□ 0.79
LINC01089-209ENST00000542933 NRXN2Q9P2S2 1712 aa20.01■□□□□ 0.79
LINC01089-209ENST00000542933 FANCIQ9NVI1 1328 aa20.01■□□□□ 0.79
LINC01089-209ENST00000542933 AFDNP55196 1824 aaKnown RBP20■□□□□ 0.79
LINC01089-209ENST00000542933 TM4SF1P30408 202 aa20■□□□□ 0.79
LINC01089-209ENST00000542933 DDR1Q08345 913 aa20■□□□□ 0.79
LINC01089-209ENST00000542933 PDIA6Q15084 440 aa20■□□□□ 0.79
LINC01089-209ENST00000542933 NECTIN2Q92692 538 aa20■□□□□ 0.79
LINC01089-209ENST00000542933 ZNF652Q9Y2D9 606 aa20■□□□□ 0.79
LINC01089-209ENST00000542933 CD2APQ9Y5K6 639 aa20■□□□□ 0.79
LINC01089-209ENST00000542933 C10orf71Q711Q0 1435 aa20■□□□□ 0.79
LINC01089-209ENST00000542933 POLRMTO00411 1230 aaKnown RBP19.99■□□□□ 0.79
LINC01089-209ENST00000542933 NFIXQ14938 502 aa19.99■□□□□ 0.79
LINC01089-209ENST00000542933 CLEC4GQ6UXB4 293 aa19.99■□□□□ 0.79
LINC01089-209ENST00000542933 LRP10Q7Z4F1 713 aa19.99■□□□□ 0.79
LINC01089-209ENST00000542933 C8orf58Q8NAV2 365 aa19.99■□□□□ 0.79
LINC01089-209ENST00000542933 CHMP4AQ9BY43 222 aa19.99■□□□□ 0.79
LINC01089-209ENST00000542933 DDX21Q9NR30 783 aaKnown RBP eCLIP19.99■□□□□ 0.79
LINC01089-209ENST00000542933 NUP98P52948 1817 aa19.99■□□□□ 0.79
LINC01089-209ENST00000542933 PROSER3Q2NL68 480 aa19.98■□□□□ 0.79
LINC01089-209ENST00000542933 KIF6Q6ZMV9 814 aa19.98■□□□□ 0.79
LINC01089-209ENST00000542933 MYH16Q9H6N6 1097 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms