RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 SLFNL1Q499Z3 407 aa8.11□□□□□ -1.11
PRKDC-209ENST00000540819 CCDC85AQ96PX6 553 aaPredicted RBP8.11□□□□□ -1.11
PRKDC-209ENST00000540819 OXCT2Q9BYC2 517 aaPredicted RBP8.11□□□□□ -1.11
PRKDC-209ENST00000540819 OIP5O43482 229 aa8.1□□□□□ -1.11
PRKDC-209ENST00000540819 SIRT1Q96EB6 747 aa8.1□□□□□ -1.11
PRKDC-209ENST00000540819 GNEQ9Y223 722 aaKnown RBP8.1□□□□□ -1.11
PRKDC-209ENST00000540819 MSTNO14793 375 aa8.09□□□□□ -1.11
PRKDC-209ENST00000540819 GPR37L1O60883 481 aa8.09□□□□□ -1.11
PRKDC-209ENST00000540819 ERCC3P19447 782 aa8.09□□□□□ -1.11
PRKDC-209ENST00000540819 RFX1P22670 979 aa8.09□□□□□ -1.11
PRKDC-209ENST00000540819 LBRQ14739 615 aaKnown RBP8.09□□□□□ -1.11
PRKDC-209ENST00000540819 EFHC2Q5JST6 749 aa8.09□□□□□ -1.11
PRKDC-209ENST00000540819 CFAP70Q5T0N1 1121 aa8.09□□□□□ -1.11
PRKDC-209ENST00000540819 DCAF5Q96JK2 942 aa8.09□□□□□ -1.11
PRKDC-209ENST00000540819 DOLKQ9UPQ8 538 aa8.09□□□□□ -1.11
PRKDC-209ENST00000540819 GALNT6Q8NCL4 622 aa8.08□□□□□ -1.12
PRKDC-209ENST00000540819 PLA2G4EQ3MJ16 856 aa8.07□□□□□ -1.12
PRKDC-209ENST00000540819 C4orf17Q53FE4 359 aa8.07□□□□□ -1.12
PRKDC-209ENST00000540819 B4GALNT3Q6L9W6 998 aa8.07□□□□□ -1.12
PRKDC-209ENST00000540819 RNF135Q8IUD6 432 aa8.07□□□□□ -1.12
PRKDC-209ENST00000540819 KLRG1Q96E93 195 aa8.07□□□□□ -1.12
PRKDC-209ENST00000540819 RUBCNLQ9H714 662 aa8.07□□□□□ -1.12
PRKDC-209ENST00000540819 GDF2Q9UK05 429 aaPredicted RBP8.07□□□□□ -1.12
PRKDC-209ENST00000540819 TBC1D2BQ9UPU7 963 aa8.07□□□□□ -1.12
PRKDC-209ENST00000540819 HRH3Q9Y5N1 445 aa8.07□□□□□ -1.12
PRKDC-209ENST00000540819 CARNS1A5YM72 827 aa8.06□□□□□ -1.12
PRKDC-209ENST00000540819 MSX1P28360 303 aa8.06□□□□□ -1.12
PRKDC-209ENST00000540819 HDGFL1Q5TGJ6 251 aa8.06□□□□□ -1.12
PRKDC-209ENST00000540819 RHBDD1Q8TEB9 315 aa8.06□□□□□ -1.12
PRKDC-209ENST00000540819 FHDC1Q9C0D6 1143 aaPredicted RBP8.06□□□□□ -1.12
PRKDC-209ENST00000540819 RRAGCQ9HB90 399 aa8.06□□□□□ -1.12
PRKDC-209ENST00000540819 BMP4P12644 408 aa8.05□□□□□ -1.12
PRKDC-209ENST00000540819 TLR1Q15399 786 aa8.05□□□□□ -1.12
PRKDC-209ENST00000540819 TSGA10IPQ3SY00 556 aa8.05□□□□□ -1.12
PRKDC-209ENST00000540819 OXLD1Q5BKU9 147 aa8.05□□□□□ -1.12
PRKDC-209ENST00000540819 PHTF2Q8N3S3 785 aa8.05□□□□□ -1.12
PRKDC-209ENST00000540819 EDARADDQ8WWZ3 215 aa8.05□□□□□ -1.12
PRKDC-209ENST00000540819 MRRFQ96E11 262 aaKnown RBP8.05□□□□□ -1.12
PRKDC-209ENST00000540819 MKL2Q9ULH7 1088 aa8.05□□□□□ -1.12
PRKDC-209ENST00000540819 TMEM88BA6NKF7 163 aa8.04□□□□□ -1.12
PRKDC-209ENST00000540819 PPM1GO15355 546 aaPredicted RBP8.04□□□□□ -1.12
PRKDC-209ENST00000540819 PPARGC1BQ86YN6 1023 aaKnown RBP8.04□□□□□ -1.12
PRKDC-209ENST00000540819 GOLGA6L1Q8N7Z2 621 aa8.04□□□□□ -1.12
PRKDC-209ENST00000540819 PPP1R12CQ9BZL4 782 aa8.04□□□□□ -1.12
PRKDC-209ENST00000540819 KIAA1522Q9P206 1035 aaPredicted RBP8.04□□□□□ -1.12
PRKDC-209ENST00000540819 ATXN7L1Q9ULK2 861 aaPredicted RBP8.04□□□□□ -1.12
PRKDC-209ENST00000540819 ATG7O95352 703 aa8.03□□□□□ -1.12
PRKDC-209ENST00000540819 THBS1P07996 1170 aa8.03□□□□□ -1.12
PRKDC-209ENST00000540819 AMPD1P23109 780 aa8.03□□□□□ -1.12
PRKDC-209ENST00000540819 TXNDC2Q86VQ3 553 aa8.03□□□□□ -1.12
PRKDC-209ENST00000540819 AIDAQ96BJ3 306 aa8.03□□□□□ -1.12
PRKDC-209ENST00000540819 DRC1Q96MC2 740 aa8.03□□□□□ -1.12
PRKDC-209ENST00000540819 ETNK1Q9HBU6 452 aa8.03□□□□□ -1.12
PRKDC-209ENST00000540819 WASHC4Q2M389 1173 aa8.02□□□□□ -1.13
PRKDC-209ENST00000540819 FIGNL1Q6PIW4 674 aa8.02□□□□□ -1.13
PRKDC-209ENST00000540819 TBC1D9Q6ZT07 1266 aa8.02□□□□□ -1.13
PRKDC-209ENST00000540819 ADAMTS19Q8TE59 1207 aa8.02□□□□□ -1.13
PRKDC-209ENST00000540819 C8orf37Q96NL8 207 aa8.02□□□□□ -1.13
PRKDC-209ENST00000540819 SPOCK3Q9BQ16 436 aa8.02□□□□□ -1.13
PRKDC-209ENST00000540819 FGFR3P22607 806 aa8.01□□□□□ -1.13
PRKDC-209ENST00000540819 PLA2G4AP47712 749 aa8.01□□□□□ -1.13
PRKDC-209ENST00000540819 SNRPNP63162 240 aaKnown RBP8.01□□□□□ -1.13
PRKDC-209ENST00000540819 VAC14Q08AM6 782 aa8.01□□□□□ -1.13
PRKDC-209ENST00000540819 SEMA3FQ13275 785 aa8.01□□□□□ -1.13
PRKDC-209ENST00000540819 MAP7D1Q3KQU3 841 aa8.01□□□□□ -1.13
PRKDC-209ENST00000540819 ABHD17AQ96GS6 310 aa8.01□□□□□ -1.13
PRKDC-209ENST00000540819 NIFKQ9BYG3 293 aaKnown RBP8.01□□□□□ -1.13
PRKDC-209ENST00000540819 SHISA8B8ZZ34 492 aa8□□□□□ -1.13
PRKDC-209ENST00000540819 PIK3R2O00459 728 aa8□□□□□ -1.13
PRKDC-209ENST00000540819 STAU1O95793 577 aaKnown RBP8□□□□□ -1.13
PRKDC-209ENST00000540819 INHAP05111 366 aa8□□□□□ -1.13
PRKDC-209ENST00000540819 TCF3P15923 654 aa8□□□□□ -1.13
PRKDC-209ENST00000540819 UBAP2LQ14157 1087 aaKnown RBP8□□□□□ -1.13
PRKDC-209ENST00000540819 ALYREFQ86V81 257 aaKnown RBP8□□□□□ -1.13
PRKDC-209ENST00000540819 CCER1Q8TC90 406 aaPredicted RBP8□□□□□ -1.13
PRKDC-209ENST00000540819 CRISPLD1Q9H336 500 aa8□□□□□ -1.13
PRKDC-209ENST00000540819 BNIP3LO60238 219 aa7.99□□□□□ -1.13
PRKDC-209ENST00000540819 GDF10P55107 478 aa7.99□□□□□ -1.13
PRKDC-209ENST00000540819 CTBSQ01459 385 aa7.99□□□□□ -1.13
PRKDC-209ENST00000540819 C1orf229Q6ZS94 237 aaPredicted RBP7.99□□□□□ -1.13
PRKDC-209ENST00000540819 C1orf216Q8TAB5 229 aa7.99□□□□□ -1.13
PRKDC-209ENST00000540819 SREK1Q8WXA9 508 aaKnown RBP7.99□□□□□ -1.13
PRKDC-209ENST00000540819 SPATA32Q96LK8 384 aa7.99□□□□□ -1.13
PRKDC-209ENST00000540819 GGA1Q9UJY5 639 aa7.99□□□□□ -1.13
PRKDC-209ENST00000540819 PCDHGC4Q9Y5F7 938 aa7.99□□□□□ -1.13
PRKDC-209ENST00000540819 PALM3A6NDB9 673 aaPredicted RBP7.98□□□□□ -1.13
PRKDC-209ENST00000540819 ARSJQ5FYB0 599 aaPredicted RBP7.98□□□□□ -1.13
PRKDC-209ENST00000540819 ZCCHC2Q9C0B9 1178 aaKnown RBP7.98□□□□□ -1.13
PRKDC-209ENST00000540819 CHIC2Q9UKJ5 165 aa7.98□□□□□ -1.13
PRKDC-209ENST00000540819 C2CD2LO14523 706 aa7.97□□□□□ -1.13
PRKDC-209ENST00000540819 ZNF16P17020 682 aaPredicted RBP7.97□□□□□ -1.13
PRKDC-209ENST00000540819 LMOD1P29536 600 aaPredicted RBP7.97□□□□□ -1.13
PRKDC-209ENST00000540819 SMTNP53814 917 aa7.97□□□□□ -1.13
PRKDC-209ENST00000540819 DNAJC14Q6Y2X3 702 aaPredicted RBP7.97□□□□□ -1.13
PRKDC-209ENST00000540819 NLRP8Q86W28 1048 aa7.97□□□□□ -1.13
PRKDC-209ENST00000540819 PLPP7Q8NBV4 271 aa7.97□□□□□ -1.13
PRKDC-209ENST00000540819 ATXN7O15265 892 aaPredicted RBP7.96□□□□□ -1.14
PRKDC-209ENST00000540819 ADAM23O75077 832 aa7.96□□□□□ -1.14
PRKDC-209ENST00000540819 ITGB2P05107 769 aa7.96□□□□□ -1.14
PRKDC-209ENST00000540819 TATP17735 454 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms