RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 ARXQ96QS3 562 aa18.1■□□□□ 0.49
CD9-208ENST00000538834 THUMPD2Q9BTF0 503 aaKnown RBP18.1■□□□□ 0.49
CD9-208ENST00000538834 EIF5P55010 431 aaKnown RBP18.09■□□□□ 0.49
CD9-208ENST00000538834 ZBTB1Q9Y2K1 713 aa18.09■□□□□ 0.49
CD9-208ENST00000538834 SCN7AQ01118 1682 aa18.09■□□□□ 0.49
CD9-208ENST00000538834 PHF14O94880 888 aa18.08■□□□□ 0.48
CD9-208ENST00000538834 GYS1P13807 737 aa18.08■□□□□ 0.48
CD9-208ENST00000538834 NCBP3Q53F19 620 aaKnown RBP18.08■□□□□ 0.48
CD9-208ENST00000538834 SYT17Q9BSW7 474 aa18.08■□□□□ 0.48
CD9-208ENST00000538834 USP16Q9Y5T5 823 aa18.08■□□□□ 0.48
CD9-208ENST00000538834 BRCA1P38398 1863 aaKnown RBP18.07■□□□□ 0.48
CD9-208ENST00000538834 USP42Q9H9J4 1324 aaKnown RBP18.07■□□□□ 0.48
CD9-208ENST00000538834 STARD3NLO95772 234 aa18.07■□□□□ 0.48
CD9-208ENST00000538834 EIF4A1P60842 406 aaKnown RBP18.07■□□□□ 0.48
CD9-208ENST00000538834 LMOD3Q0VAK6 560 aa18.07■□□□□ 0.48
CD9-208ENST00000538834 FHDC1Q9C0D6 1143 aaPredicted RBP18.07■□□□□ 0.48
CD9-208ENST00000538834 MIS18AQ9NYP9 233 aa18.07■□□□□ 0.48
CD9-208ENST00000538834 PRAMEF22A3QJZ6 481 aa18.06■□□□□ 0.48
CD9-208ENST00000538834 SNRPA1P09661 255 aaKnown RBP18.06■□□□□ 0.48
CD9-208ENST00000538834 RRP7AQ9Y3A4 280 aaKnown RBP18.06■□□□□ 0.48
CD9-208ENST00000538834 NUP98P52948 1817 aa18.06■□□□□ 0.48
CD9-208ENST00000538834 COL15A1P39059 1388 aa18.05■□□□□ 0.48
CD9-208ENST00000538834 CHL1O00533 1208 aa18.05■□□□□ 0.48
CD9-208ENST00000538834 APAF1O14727 1248 aa18.05■□□□□ 0.48
CD9-208ENST00000538834 GIGYF1O75420 1035 aaPredicted RBP18.05■□□□□ 0.48
CD9-208ENST00000538834 POLD1P28340 1107 aa18.05■□□□□ 0.48
CD9-208ENST00000538834 NLGN1Q8N2Q7 840 aa18.05■□□□□ 0.48
CD9-208ENST00000538834 MSH5O43196 834 aa18.04■□□□□ 0.48
CD9-208ENST00000538834 ZNF853P0CG23 659 aa18.04■□□□□ 0.48
CD9-208ENST00000538834 IL6STP40189 918 aaPredicted RBP18.04■□□□□ 0.48
CD9-208ENST00000538834 MSL1Q68DK7 614 aa18.04■□□□□ 0.48
CD9-208ENST00000538834 BCL2L12Q9HB09 334 aa18.04■□□□□ 0.48
CD9-208ENST00000538834 PPP1R1BQ9UD71 204 aaPredicted RBP18.04■□□□□ 0.48
CD9-208ENST00000538834 NARFQ9UHQ1 456 aa18.04■□□□□ 0.48
CD9-208ENST00000538834 CHD4Q14839 1912 aa18.04■□□□□ 0.48
CD9-208ENST00000538834 A1BGP04217 495 aa18.03■□□□□ 0.48
CD9-208ENST00000538834 TM4SF1P30408 202 aa18.03■□□□□ 0.48
CD9-208ENST00000538834 RFC4P35249 363 aa18.03■□□□□ 0.48
CD9-208ENST00000538834 MRS2Q9HD23 443 aa18.03■□□□□ 0.48
CD9-208ENST00000538834 NBPF26B4DH59 902 aa18.02■□□□□ 0.48
CD9-208ENST00000538834 CCDC27Q2M243 656 aa18.02■□□□□ 0.48
CD9-208ENST00000538834 NBPF10Q6P3W6 841 aaKnown RBP18.02■□□□□ 0.48
CD9-208ENST00000538834 NBPF15Q8N660 670 aa18.02■□□□□ 0.48
CD9-208ENST00000538834 SRP68Q9UHB9 627 aaKnown RBP18.02■□□□□ 0.48
CD9-208ENST00000538834 CD2APQ9Y5K6 639 aa18.01■□□□□ 0.47
CD9-208ENST00000538834 N4BP2Q86UW6 1770 aaPredicted RBP18.01■□□□□ 0.47
CD9-208ENST00000538834 GOLGB1Q14789 3259 aaKnown RBP18.01■□□□□ 0.47
CD9-208ENST00000538834 FKBP8Q14318 412 aa18■□□□□ 0.47
CD9-208ENST00000538834 NEUROD2Q15784 382 aa18■□□□□ 0.47
CD9-208ENST00000538834 CACNA1FO60840 1977 aa18■□□□□ 0.47
CD9-208ENST00000538834 ANKRD31Q8N7Z5 1873 aa17.99■□□□□ 0.47
CD9-208ENST00000538834 RGL2O15211 777 aa17.99■□□□□ 0.47
CD9-208ENST00000538834 MMP10P09238 476 aa17.99■□□□□ 0.47
CD9-208ENST00000538834 CANXP27824 592 aaKnown RBP17.99■□□□□ 0.47
CD9-208ENST00000538834 LRP10Q7Z4F1 713 aa17.99■□□□□ 0.47
CD9-208ENST00000538834 CFAP44Q96MT7 982 aa17.99■□□□□ 0.47
CD9-208ENST00000538834 C10orf71Q711Q0 1435 aa17.98■□□□□ 0.47
CD9-208ENST00000538834 USPL1Q5W0Q7 1092 aa17.98■□□□□ 0.47
CD9-208ENST00000538834 TSPYL4Q9UJ04 414 aa17.98■□□□□ 0.47
CD9-208ENST00000538834 DLEC1Q9Y238 1755 aa17.98■□□□□ 0.47
CD9-208ENST00000538834 UTRNP46939 3433 aa17.98■□□□□ 0.47
CD9-208ENST00000538834 A0A087WZG4 1122 aa17.97■□□□□ 0.47
CD9-208ENST00000538834 DDR1Q08345 913 aa17.97■□□□□ 0.47
CD9-208ENST00000538834 ARFGEF1Q9Y6D6 1849 aa17.96■□□□□ 0.47
CD9-208ENST00000538834 POLRMTO00411 1230 aaKnown RBP17.96■□□□□ 0.47
CD9-208ENST00000538834 CAMTA2O94983 1202 aa17.96■□□□□ 0.47
CD9-208ENST00000538834 PDIA6Q15084 440 aa17.96■□□□□ 0.47
CD9-208ENST00000538834 NLGN2Q8NFZ4 835 aa17.96■□□□□ 0.47
CD9-208ENST00000538834 ERBB4Q15303 1308 aa17.96■□□□□ 0.46
CD9-208ENST00000538834 ZPR1O75312 459 aa17.95■□□□□ 0.46
CD9-208ENST00000538834 IFT57Q9NWB7 429 aa17.95■□□□□ 0.46
CD9-208ENST00000538834 ANKRD36CQ5JPF3 1778 aa17.94■□□□□ 0.46
CD9-208ENST00000538834 NFIXQ14938 502 aa17.94■□□□□ 0.46
CD9-208ENST00000538834 WWC1Q8IX03 1113 aa17.94■□□□□ 0.46
CD9-208ENST00000538834 HOXB7P09629 217 aa17.93■□□□□ 0.46
CD9-208ENST00000538834 PIP4K2AP48426 406 aaPredicted RBP17.93■□□□□ 0.46
CD9-208ENST00000538834 MBIPQ9NS73 344 aa17.93■□□□□ 0.46
CD9-208ENST00000538834 TBC1D2BQ9UPU7 963 aa17.93■□□□□ 0.46
CD9-208ENST00000538834 PXDNLA1KZ92 1463 aa17.93■□□□□ 0.46
CD9-208ENST00000538834 CCER2I3L3R5 266 aa17.92■□□□□ 0.46
CD9-208ENST00000538834 KRT24Q2M2I5 525 aa17.92■□□□□ 0.46
CD9-208ENST00000538834 CLEC4GQ6UXB4 293 aa17.92■□□□□ 0.46
CD9-208ENST00000538834 IL16Q14005 1332 aa17.92■□□□□ 0.46
CD9-208ENST00000538834 GNAI1P63096 354 aa17.91■□□□□ 0.46
CD9-208ENST00000538834 CALD1Q05682 793 aaKnown RBP17.91■□□□□ 0.46
CD9-208ENST00000538834 DZIP3Q86Y13 1208 aaKnown RBP17.91■□□□□ 0.46
CD9-208ENST00000538834 NGEFQ8N5V2 710 aa17.91■□□□□ 0.46
CD9-208ENST00000538834 PARP3Q9Y6F1 533 aa17.91■□□□□ 0.46
CD9-208ENST00000538834 TGFB2P61812 414 aa17.9■□□□□ 0.46
CD9-208ENST00000538834 TBC1D9BQ66K14 1250 aa17.9■□□□□ 0.46
CD9-208ENST00000538834 KCNA3P22001 575 aa17.89■□□□□ 0.45
CD9-208ENST00000538834 ZNF521Q96K83 1311 aa17.89■□□□□ 0.45
CD9-208ENST00000538834 ERVV-1B6SEH8 477 aa17.88■□□□□ 0.45
CD9-208ENST00000538834 ARFGEF2Q9Y6D5 1785 aa17.88■□□□□ 0.45
CD9-208ENST00000538834 COL11A2P13942 1736 aaPredicted RBP17.87■□□□□ 0.45
CD9-208ENST00000538834 SERPINB2P05120 415 aa17.87■□□□□ 0.45
CD9-208ENST00000538834 PROSER3Q2NL68 480 aa17.87■□□□□ 0.45
CD9-208ENST00000538834 WDR63Q8IWG1 891 aa17.87■□□□□ 0.45
CD9-208ENST00000538834 SBF1O95248 1867 aa17.86■□□□□ 0.45
CD9-208ENST00000538834 YBX3P16989 372 aaKnown RBP eCLIP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms