RNA–Protein interactions for RNA: ENST00000533991.1

RDX-216, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-216ENST00000533991 RRP7AQ9Y3A4 280 aaKnown RBP20.41■□□□□ 0.86
RDX-216ENST00000533991 MMP10P09238 476 aa20.4■□□□□ 0.86
RDX-216ENST00000533991 EIF5P55010 431 aaKnown RBP20.4■□□□□ 0.86
RDX-216ENST00000533991 TTC5Q8N0Z6 440 aa20.4■□□□□ 0.86
RDX-216ENST00000533991 USP42Q9H9J4 1324 aaKnown RBP20.39■□□□□ 0.85
RDX-216ENST00000533991 RFC4P35249 363 aa20.39■□□□□ 0.85
RDX-216ENST00000533991 RIPK4P57078 832 aa20.39■□□□□ 0.85
RDX-216ENST00000533991 FMNL2Q96PY5 1086 aa20.39■□□□□ 0.85
RDX-216ENST00000533991 TRIM35Q9UPQ4 493 aa20.39■□□□□ 0.85
RDX-216ENST00000533991 CANXP27824 592 aaKnown RBP20.38■□□□□ 0.85
RDX-216ENST00000533991 KLHL34Q8N239 644 aa20.38■□□□□ 0.85
RDX-216ENST00000533991 C4AP0C0L4 1744 aa20.38■□□□□ 0.85
RDX-216ENST00000533991 TM4SF1P30408 202 aa20.37■□□□□ 0.85
RDX-216ENST00000533991 PIP4K2AP48426 406 aaPredicted RBP20.37■□□□□ 0.85
RDX-216ENST00000533991 DDR1Q08345 913 aa20.37■□□□□ 0.85
RDX-216ENST00000533991 NLGN1Q8N2Q7 840 aa20.37■□□□□ 0.85
RDX-216ENST00000533991 NBPF26B4DH59 902 aa20.36■□□□□ 0.85
RDX-216ENST00000533991 USPL1Q5W0Q7 1092 aa20.36■□□□□ 0.85
RDX-216ENST00000533991 NBPF10Q6P3W6 841 aaKnown RBP20.36■□□□□ 0.85
RDX-216ENST00000533991 NBPF15Q8N660 670 aa20.36■□□□□ 0.85
RDX-216ENST00000533991 RUNDC1Q96C34 613 aa20.36■□□□□ 0.85
RDX-216ENST00000533991 PNNQ9H307 717 aaKnown RBP20.36■□□□□ 0.85
RDX-216ENST00000533991 MAPK8IP3Q9UPT6 1336 aa20.35■□□□□ 0.85
RDX-216ENST00000533991 EIF4A1P60842 406 aaKnown RBP20.35■□□□□ 0.85
RDX-216ENST00000533991 NARFQ9UHQ1 456 aa20.35■□□□□ 0.85
RDX-216ENST00000533991 CD2APQ9Y5K6 639 aa20.35■□□□□ 0.85
RDX-216ENST00000533991 STARD3NLO95772 234 aa20.34■□□□□ 0.85
RDX-216ENST00000533991 YBX3P16989 372 aaKnown RBP eCLIP20.34■□□□□ 0.85
RDX-216ENST00000533991 NEUROD2Q15784 382 aa20.34■□□□□ 0.85
RDX-216ENST00000533991 TEX13AQ9BXU3 409 aaPredicted RBP20.34■□□□□ 0.85
RDX-216ENST00000533991 SNRPA1P09661 255 aaKnown RBP20.33■□□□□ 0.85
RDX-216ENST00000533991 COL15A1P39059 1388 aa20.33■□□□□ 0.84
RDX-216ENST00000533991 GIGYF1O75420 1035 aaPredicted RBP20.32■□□□□ 0.84
RDX-216ENST00000533991 NEFMP07197 916 aa20.32■□□□□ 0.84
RDX-216ENST00000533991 WDR43Q15061 677 aaKnown RBP eCLIP20.32■□□□□ 0.84
RDX-216ENST00000533991 PNISRQ8TF01 805 aaKnown RBP20.32■□□□□ 0.84
RDX-216ENST00000533991 NFIXQ14938 502 aa20.31■□□□□ 0.84
RDX-216ENST00000533991 TBC1D2BQ9UPU7 963 aa20.31■□□□□ 0.84
RDX-216ENST00000533991 POLRMTO00411 1230 aaKnown RBP20.3■□□□□ 0.84
RDX-216ENST00000533991 APAF1O14727 1248 aa20.3■□□□□ 0.84
RDX-216ENST00000533991 IL6STP40189 918 aaPredicted RBP20.3■□□□□ 0.84
RDX-216ENST00000533991 SENP3-EIF4A1A0A087X0R7 540 aa20.29■□□□□ 0.84
RDX-216ENST00000533991 KDM3BQ7LBC6 1761 aa20.29■□□□□ 0.84
RDX-216ENST00000533991 CHL1O00533 1208 aa20.28■□□□□ 0.84
RDX-216ENST00000533991 ZPR1O75312 459 aa20.28■□□□□ 0.84
RDX-216ENST00000533991 CAMTA2O94983 1202 aa20.28■□□□□ 0.84
RDX-216ENST00000533991 KCNA3P22001 575 aa20.28■□□□□ 0.84
RDX-216ENST00000533991 KRT24Q2M2I5 525 aa20.28■□□□□ 0.84
RDX-216ENST00000533991 WWC3Q9ULE0 1092 aa20.28■□□□□ 0.84
RDX-216ENST00000533991 A0A0G2JLW4 131 aa20.26■□□□□ 0.83
RDX-216ENST00000533991 GPR162Q16538 588 aa20.26■□□□□ 0.83
RDX-216ENST00000533991 TBC1D9BQ66K14 1250 aa20.26■□□□□ 0.83
RDX-216ENST00000533991 KIAA1551Q9HCM1 1747 aa20.26■□□□□ 0.83
RDX-216ENST00000533991 C10orf71Q711Q0 1435 aa20.26■□□□□ 0.83
RDX-216ENST00000533991 LRP10Q7Z4F1 713 aa20.25■□□□□ 0.83
RDX-216ENST00000533991 TSPYL4Q9UJ04 414 aa20.25■□□□□ 0.83
RDX-216ENST00000533991 PARP3Q9Y6F1 533 aa20.25■□□□□ 0.83
RDX-216ENST00000533991 DPEP1P16444 411 aa20.24■□□□□ 0.83
RDX-216ENST00000533991 PDIA6Q15084 440 aa20.24■□□□□ 0.83
RDX-216ENST00000533991 ZNF330Q9Y3S2 320 aaPredicted RBP20.24■□□□□ 0.83
RDX-216ENST00000533991 KIF13BQ9NQT8 1826 aa20.24■□□□□ 0.83
RDX-216ENST00000533991 PXDNLA1KZ92 1463 aa20.24■□□□□ 0.83
RDX-216ENST00000533991 ANP32CO43423 234 aa20.23■□□□□ 0.83
RDX-216ENST00000533991 ZNF853P0CG23 659 aa20.23■□□□□ 0.83
RDX-216ENST00000533991 PELP1Q8IZL8 1130 aaKnown RBP20.23■□□□□ 0.83
RDX-216ENST00000533991 A0A087WZG4 1122 aa20.22■□□□□ 0.83
RDX-216ENST00000533991 SERPINB2P05120 415 aa20.22■□□□□ 0.83
RDX-216ENST00000533991 BICDL1Q6ZP65 573 aa20.22■□□□□ 0.83
RDX-216ENST00000533991 BABAM1Q9NWV8 329 aa20.22■□□□□ 0.83
RDX-216ENST00000533991 LMOD3Q0VAK6 560 aa20.21■□□□□ 0.83
RDX-216ENST00000533991 HLFQ16534 295 aa20.21■□□□□ 0.83
RDX-216ENST00000533991 PROSER3Q2NL68 480 aa20.21■□□□□ 0.83
RDX-216ENST00000533991 DZIP3Q86Y13 1208 aaKnown RBP20.21■□□□□ 0.83
RDX-216ENST00000533991 TGFB2P61812 414 aa20.2■□□□□ 0.82
RDX-216ENST00000533991 TTLL7Q6ZT98 887 aa20.2■□□□□ 0.82
RDX-216ENST00000533991 CCDC24Q8N4L8 307 aa20.2■□□□□ 0.82
RDX-216ENST00000533991 MRS2Q9HD23 443 aa20.2■□□□□ 0.82
RDX-216ENST00000533991 N4BP2Q86UW6 1770 aaPredicted RBP20.2■□□□□ 0.82
RDX-216ENST00000533991 AFDNP55196 1824 aaKnown RBP20.2■□□□□ 0.82
RDX-216ENST00000533991 ANXA1P04083 346 aa20.19■□□□□ 0.82
RDX-216ENST00000533991 YY1P25490 414 aa20.19■□□□□ 0.82
RDX-216ENST00000533991 CHRNA5P30532 468 aa20.19■□□□□ 0.82
RDX-216ENST00000533991 LAS1LQ9Y4W2 734 aaKnown RBP20.19■□□□□ 0.82
RDX-216ENST00000533991 CARMIL3Q8ND23 1372 aa20.19■□□□□ 0.82
RDX-216ENST00000533991 DCAF8L1A6NGE4 600 aa20.18■□□□□ 0.82
RDX-216ENST00000533991 NGEFQ8N5V2 710 aa20.18■□□□□ 0.82
RDX-216ENST00000533991 NRXN2Q9P2S2 1712 aa20.18■□□□□ 0.82
RDX-216ENST00000533991 EIF2S2P20042 333 aaKnown RBP20.17■□□□□ 0.82
RDX-216ENST00000533991 CFAP44Q96MT7 982 aa20.17■□□□□ 0.82
RDX-216ENST00000533991 MBIPQ9NS73 344 aa20.17■□□□□ 0.82
RDX-216ENST00000533991 MYL6BP14649 208 aa20.15■□□□□ 0.82
RDX-216ENST00000533991 PRR5LQ6MZQ0 368 aa20.15■□□□□ 0.82
RDX-216ENST00000533991 NECTIN2Q92692 538 aa20.15■□□□□ 0.82
RDX-216ENST00000533991 SCN7AQ01118 1682 aa20.14■□□□□ 0.81
RDX-216ENST00000533991 CLEC4GQ6UXB4 293 aa20.14■□□□□ 0.81
RDX-216ENST00000533991 LAMB4A4D0S4 1761 aa20.13■□□□□ 0.81
RDX-216ENST00000533991 CHD4Q14839 1912 aa20.12■□□□□ 0.81
RDX-216ENST00000533991 GRIN3BO60391 1043 aa20.12■□□□□ 0.81
RDX-216ENST00000533991 WWC1Q8IX03 1113 aa20.12■□□□□ 0.81
RDX-216ENST00000533991 SETDB2Q96T68 719 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms