RNA–Protein interactions for RNA: ENST00000529998.5

UBASH3B-205, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 4

Gene UBASH3B, Length 698 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-205ENST00000529998 RTCBQ9Y3I0 505 aaKnown RBP11.38□□□□□ -0.59
UBASH3B-205ENST00000529998 USP16Q9Y5T5 823 aa11.38□□□□□ -0.59
UBASH3B-205ENST00000529998 C4AP0C0L4 1744 aa11.38□□□□□ -0.59
UBASH3B-205ENST00000529998 CHL1O00533 1208 aa11.37□□□□□ -0.59
UBASH3B-205ENST00000529998 SSFA2P28290 1259 aa11.37□□□□□ -0.59
UBASH3B-205ENST00000529998 EIF4A1P60842 406 aaKnown RBP11.37□□□□□ -0.59
UBASH3B-205ENST00000529998 FLAD1Q8NFF5 587 aa11.37□□□□□ -0.59
UBASH3B-205ENST00000529998 SLC16A10Q8TF71 515 aa11.37□□□□□ -0.59
UBASH3B-205ENST00000529998 TEX13AQ9BXU3 409 aaPredicted RBP11.37□□□□□ -0.59
UBASH3B-205ENST00000529998 SPON1Q9HCB6 807 aa11.37□□□□□ -0.59
UBASH3B-205ENST00000529998 CCDC87Q9NVE4 849 aa11.37□□□□□ -0.59
UBASH3B-205ENST00000529998 TSPYL4Q9UJ04 414 aa11.37□□□□□ -0.59
UBASH3B-205ENST00000529998 LAS1LQ9Y4W2 734 aaKnown RBP11.37□□□□□ -0.59
UBASH3B-205ENST00000529998 STARD3NLO95772 234 aa11.36□□□□□ -0.59
UBASH3B-205ENST00000529998 A1BGP04217 495 aa11.36□□□□□ -0.59
UBASH3B-205ENST00000529998 SNRPA1P09661 255 aaKnown RBP11.36□□□□□ -0.59
UBASH3B-205ENST00000529998 PTGER2P43116 358 aa11.36□□□□□ -0.59
UBASH3B-205ENST00000529998 TRAPPC3LQ5T215 181 aa11.36□□□□□ -0.59
UBASH3B-205ENST00000529998 ARHGEF1Q92888 912 aaKnown RBP11.36□□□□□ -0.59
UBASH3B-205ENST00000529998 MTFR1LQ9H019 292 aa11.36□□□□□ -0.59
UBASH3B-205ENST00000529998 BABAM1Q9NWV8 329 aa11.36□□□□□ -0.59
UBASH3B-205ENST00000529998 ZBTB1Q9Y2K1 713 aa11.36□□□□□ -0.59
UBASH3B-205ENST00000529998 SALL2Q9Y467 1007 aaPredicted RBP11.36□□□□□ -0.59
UBASH3B-205ENST00000529998 LAMB4A4D0S4 1761 aa11.36□□□□□ -0.59
UBASH3B-205ENST00000529998 GIGYF1O75420 1035 aaPredicted RBP11.35□□□□□ -0.59
UBASH3B-205ENST00000529998 ZNF853P0CG23 659 aa11.35□□□□□ -0.59
UBASH3B-205ENST00000529998 CANXP27824 592 aaKnown RBP11.35□□□□□ -0.59
UBASH3B-205ENST00000529998 CCDC27Q2M243 656 aa11.35□□□□□ -0.59
UBASH3B-205ENST00000529998 WWC1Q8IX03 1113 aa11.35□□□□□ -0.59
UBASH3B-205ENST00000529998 CFAP44Q96MT7 982 aa11.35□□□□□ -0.59
UBASH3B-205ENST00000529998 SGIP1Q9BQI5 828 aa11.35□□□□□ -0.59
UBASH3B-205ENST00000529998 SOS1Q07889 1333 aaPredicted RBP11.35□□□□□ -0.59
UBASH3B-205ENST00000529998 PIP4K2AP48426 406 aaPredicted RBP11.34□□□□□ -0.59
UBASH3B-205ENST00000529998 KRT24Q2M2I5 525 aa11.34□□□□□ -0.59
UBASH3B-205ENST00000529998 NCBP3Q53F19 620 aaKnown RBP11.34□□□□□ -0.59
UBASH3B-205ENST00000529998 MSL1Q68DK7 614 aa11.34□□□□□ -0.59
UBASH3B-205ENST00000529998 RFC4P35249 363 aa11.33□□□□□ -0.6
UBASH3B-205ENST00000529998 EIF5P55010 431 aaKnown RBP11.33□□□□□ -0.6
UBASH3B-205ENST00000529998 MBIPQ9NS73 344 aa11.33□□□□□ -0.6
UBASH3B-205ENST00000529998 IFT57Q9NWB7 429 aa11.33□□□□□ -0.6
UBASH3B-205ENST00000529998 COL15A1P39059 1388 aa11.32□□□□□ -0.6
UBASH3B-205ENST00000529998 NBPF26B4DH59 902 aa11.32□□□□□ -0.6
UBASH3B-205ENST00000529998 GNAI1P63096 354 aa11.32□□□□□ -0.6
UBASH3B-205ENST00000529998 CALD1Q05682 793 aaKnown RBP11.32□□□□□ -0.6
UBASH3B-205ENST00000529998 NBPF10Q6P3W6 841 aaKnown RBP11.32□□□□□ -0.6
UBASH3B-205ENST00000529998 NBPF15Q8N660 670 aa11.32□□□□□ -0.6
UBASH3B-205ENST00000529998 SRP68Q9UHB9 627 aaKnown RBP11.32□□□□□ -0.6
UBASH3B-205ENST00000529998 GYS1P13807 737 aa11.31□□□□□ -0.6
UBASH3B-205ENST00000529998 IL6STP40189 918 aaPredicted RBP11.31□□□□□ -0.6
UBASH3B-205ENST00000529998 ZNF330Q9Y3S2 320 aaPredicted RBP11.31□□□□□ -0.6
UBASH3B-205ENST00000529998 USP42Q9H9J4 1324 aaKnown RBP11.31□□□□□ -0.6
UBASH3B-205ENST00000529998 USPL1Q5W0Q7 1092 aa11.3□□□□□ -0.6
UBASH3B-205ENST00000529998 TSR2Q969E8 191 aaKnown RBP11.3□□□□□ -0.6
UBASH3B-205ENST00000529998 ARXQ96QS3 562 aa11.3□□□□□ -0.6
UBASH3B-205ENST00000529998 PPP1R1BQ9UD71 204 aaPredicted RBP11.3□□□□□ -0.6
UBASH3B-205ENST00000529998 NARFQ9UHQ1 456 aa11.3□□□□□ -0.6
UBASH3B-205ENST00000529998 ZPR1O75312 459 aa11.29□□□□□ -0.6
UBASH3B-205ENST00000529998 EIF2S2P20042 333 aaKnown RBP11.29□□□□□ -0.6
UBASH3B-205ENST00000529998 POLD1P28340 1107 aa11.29□□□□□ -0.6
UBASH3B-205ENST00000529998 FKBP8Q14318 412 aa11.29□□□□□ -0.6
UBASH3B-205ENST00000529998 WDR63Q8IWG1 891 aa11.29□□□□□ -0.6
UBASH3B-205ENST00000529998 NLGN1Q8N2Q7 840 aa11.29□□□□□ -0.6
UBASH3B-205ENST00000529998 NGEFQ8N5V2 710 aa11.29□□□□□ -0.6
UBASH3B-205ENST00000529998 NECTIN2Q92692 538 aa11.29□□□□□ -0.6
UBASH3B-205ENST00000529998 BCL2L12Q9HB09 334 aa11.29□□□□□ -0.6
UBASH3B-205ENST00000529998 SPINK5Q9NQ38 1064 aaPredicted RBP11.29□□□□□ -0.6
UBASH3B-205ENST00000529998 TBC1D2BQ9UPU7 963 aa11.29□□□□□ -0.6
UBASH3B-205ENST00000529998 IL16Q14005 1332 aa11.29□□□□□ -0.6
UBASH3B-205ENST00000529998 A0A087WZG4 1122 aa11.28□□□□□ -0.6
UBASH3B-205ENST00000529998 ELL2O00472 640 aaPredicted RBP11.28□□□□□ -0.6
UBASH3B-205ENST00000529998 MYL6BP14649 208 aa11.28□□□□□ -0.6
UBASH3B-205ENST00000529998 PDIA6Q15084 440 aa11.28□□□□□ -0.6
UBASH3B-205ENST00000529998 DUSP27Q5VZP5 1158 aa11.28□□□□□ -0.6
UBASH3B-205ENST00000529998 C8orf58Q8NAV2 365 aa11.28□□□□□ -0.6
UBASH3B-205ENST00000529998 ZNF521Q96K83 1311 aa11.28□□□□□ -0.6
UBASH3B-205ENST00000529998 BCORQ6W2J9 1755 aa11.28□□□□□ -0.6
UBASH3B-205ENST00000529998 SCN7AQ01118 1682 aa11.27□□□□□ -0.6
UBASH3B-205ENST00000529998 ANXA1P04083 346 aa11.27□□□□□ -0.61
UBASH3B-205ENST00000529998 MMP10P09238 476 aa11.27□□□□□ -0.61
UBASH3B-205ENST00000529998 PROSER3Q2NL68 480 aa11.27□□□□□ -0.61
UBASH3B-205ENST00000529998 DZIP3Q86Y13 1208 aaKnown RBP11.27□□□□□ -0.61
UBASH3B-205ENST00000529998 TSPYL6Q8N831 410 aa11.27□□□□□ -0.61
UBASH3B-205ENST00000529998 FHDC1Q9C0D6 1143 aaPredicted RBP11.27□□□□□ -0.61
UBASH3B-205ENST00000529998 NUP98P52948 1817 aa11.26□□□□□ -0.61
UBASH3B-205ENST00000529998 AFDNP55196 1824 aaKnown RBP11.26□□□□□ -0.61
UBASH3B-205ENST00000529998 CAMTA2O94983 1202 aa11.26□□□□□ -0.61
UBASH3B-205ENST00000529998 HOXB7P09629 217 aa11.26□□□□□ -0.61
UBASH3B-205ENST00000529998 TM4SF1P30408 202 aa11.26□□□□□ -0.61
UBASH3B-205ENST00000529998 LRP10Q7Z4F1 713 aa11.26□□□□□ -0.61
UBASH3B-205ENST00000529998 NPM2Q86SE8 214 aaKnown RBP11.26□□□□□ -0.61
UBASH3B-205ENST00000529998 ERBB4Q15303 1308 aa11.26□□□□□ -0.61
UBASH3B-205ENST00000529998 DDR1Q08345 913 aa11.25□□□□□ -0.61
UBASH3B-205ENST00000529998 HDGFL1Q5TGJ6 251 aa11.25□□□□□ -0.61
UBASH3B-205ENST00000529998 POTEHQ6S545 545 aa11.25□□□□□ -0.61
UBASH3B-205ENST00000529998 TTLL7Q6ZT98 887 aa11.25□□□□□ -0.61
UBASH3B-205ENST00000529998 SYT17Q9BSW7 474 aa11.25□□□□□ -0.61
UBASH3B-205ENST00000529998 CHPF2Q9P2E5 772 aa11.25□□□□□ -0.61
UBASH3B-205ENST00000529998 FANCIQ9NVI1 1328 aa11.25□□□□□ -0.61
UBASH3B-205ENST00000529998 C1QBPQ07021 282 aaKnown RBP11.24□□□□□ -0.61
UBASH3B-205ENST00000529998 NFIXQ14938 502 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms