RNA–Protein interactions for RNA: ENST00000528789.1

CHRDL2-206, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-206ENST00000528789 SLC16A10Q8TF71 515 aa22.87■■□□□ 1.25
CHRDL2-206ENST00000528789 STARD3NLO95772 234 aa22.86■■□□□ 1.25
CHRDL2-206ENST00000528789 ZBTB1Q9Y2K1 713 aa22.86■■□□□ 1.25
CHRDL2-206ENST00000528789 SNRPA1P09661 255 aaKnown RBP22.85■■□□□ 1.25
CHRDL2-206ENST00000528789 PTGER2P43116 358 aa22.85■■□□□ 1.25
CHRDL2-206ENST00000528789 TEX13AQ9BXU3 409 aaPredicted RBP22.85■■□□□ 1.25
CHRDL2-206ENST00000528789 CANXP27824 592 aaKnown RBP22.84■■□□□ 1.25
CHRDL2-206ENST00000528789 EIF4A1P60842 406 aaKnown RBP22.84■■□□□ 1.25
CHRDL2-206ENST00000528789 ARHGEF1Q92888 912 aaKnown RBP22.84■■□□□ 1.25
CHRDL2-206ENST00000528789 USP16Q9Y5T5 823 aa22.84■■□□□ 1.25
CHRDL2-206ENST00000528789 CCER2I3L3R5 266 aa22.83■■□□□ 1.25
CHRDL2-206ENST00000528789 PPP1R1BQ9UD71 204 aaPredicted RBP22.83■■□□□ 1.25
CHRDL2-206ENST00000528789 SALL2Q9Y467 1007 aaPredicted RBP22.83■■□□□ 1.25
CHRDL2-206ENST00000528789 SOS1Q07889 1333 aaPredicted RBP22.82■■□□□ 1.24
CHRDL2-206ENST00000528789 A1BGP04217 495 aa22.82■■□□□ 1.24
CHRDL2-206ENST00000528789 ADRA2BP18089 450 aa22.82■■□□□ 1.24
CHRDL2-206ENST00000528789 MIER1Q8N108 512 aa22.82■■□□□ 1.24
CHRDL2-206ENST00000528789 SGIP1Q9BQI5 828 aa22.82■■□□□ 1.24
CHRDL2-206ENST00000528789 CHL1O00533 1208 aa22.81■■□□□ 1.24
CHRDL2-206ENST00000528789 RFC4P35249 363 aa22.81■■□□□ 1.24
CHRDL2-206ENST00000528789 PIP4K2AP48426 406 aaPredicted RBP22.81■■□□□ 1.24
CHRDL2-206ENST00000528789 BABAM1Q9NWV8 329 aa22.81■■□□□ 1.24
CHRDL2-206ENST00000528789 SRP68Q9UHB9 627 aaKnown RBP22.8■■□□□ 1.24
CHRDL2-206ENST00000528789 ZNF330Q9Y3S2 320 aaPredicted RBP22.8■■□□□ 1.24
CHRDL2-206ENST00000528789 GIGYF1O75420 1035 aaPredicted RBP22.79■■□□□ 1.24
CHRDL2-206ENST00000528789 POLD1P28340 1107 aa22.79■■□□□ 1.24
CHRDL2-206ENST00000528789 C4AP0C0L4 1744 aa22.79■■□□□ 1.24
CHRDL2-206ENST00000528789 COL15A1P39059 1388 aa22.78■■□□□ 1.24
CHRDL2-206ENST00000528789 CFAP44Q96MT7 982 aa22.78■■□□□ 1.24
CHRDL2-206ENST00000528789 CALD1Q05682 793 aaKnown RBP22.77■■□□□ 1.24
CHRDL2-206ENST00000528789 KRT24Q2M2I5 525 aa22.77■■□□□ 1.24
CHRDL2-206ENST00000528789 WWC1Q8IX03 1113 aa22.77■■□□□ 1.24
CHRDL2-206ENST00000528789 ARXQ96QS3 562 aa22.77■■□□□ 1.24
CHRDL2-206ENST00000528789 COL24A1Q17RW2 1714 aa22.77■■□□□ 1.23
CHRDL2-206ENST00000528789 EIF5P55010 431 aaKnown RBP22.76■■□□□ 1.23
CHRDL2-206ENST00000528789 CCDC27Q2M243 656 aa22.76■■□□□ 1.23
CHRDL2-206ENST00000528789 MBIPQ9NS73 344 aa22.76■■□□□ 1.23
CHRDL2-206ENST00000528789 IFT57Q9NWB7 429 aa22.76■■□□□ 1.23
CHRDL2-206ENST00000528789 USP42Q9H9J4 1324 aaKnown RBP22.76■■□□□ 1.23
CHRDL2-206ENST00000528789 ZNF853P0CG23 659 aa22.75■■□□□ 1.23
CHRDL2-206ENST00000528789 GYS1P13807 737 aa22.75■■□□□ 1.23
CHRDL2-206ENST00000528789 LAMB4A4D0S4 1761 aa22.75■■□□□ 1.23
CHRDL2-206ENST00000528789 ZPR1O75312 459 aa22.74■■□□□ 1.23
CHRDL2-206ENST00000528789 IL6STP40189 918 aaPredicted RBP22.74■■□□□ 1.23
CHRDL2-206ENST00000528789 GNAI1P63096 354 aa22.74■■□□□ 1.23
CHRDL2-206ENST00000528789 USPL1Q5W0Q7 1092 aa22.74■■□□□ 1.23
CHRDL2-206ENST00000528789 NBPF26B4DH59 902 aa22.73■■□□□ 1.23
CHRDL2-206ENST00000528789 EIF2S2P20042 333 aaKnown RBP22.73■■□□□ 1.23
CHRDL2-206ENST00000528789 NBPF10Q6P3W6 841 aaKnown RBP22.73■■□□□ 1.23
CHRDL2-206ENST00000528789 KLHL34Q8N239 644 aa22.73■■□□□ 1.23
CHRDL2-206ENST00000528789 NBPF15Q8N660 670 aa22.73■■□□□ 1.23
CHRDL2-206ENST00000528789 A0A087WZG4 1122 aa22.72■■□□□ 1.23
CHRDL2-206ENST00000528789 FKBP8Q14318 412 aa22.72■■□□□ 1.23
CHRDL2-206ENST00000528789 NCBP3Q53F19 620 aaKnown RBP22.72■■□□□ 1.23
CHRDL2-206ENST00000528789 NARFQ9UHQ1 456 aa22.72■■□□□ 1.23
CHRDL2-206ENST00000528789 TBC1D2BQ9UPU7 963 aa22.72■■□□□ 1.23
CHRDL2-206ENST00000528789 MMP10P09238 476 aa22.71■■□□□ 1.23
CHRDL2-206ENST00000528789 NPM2Q86SE8 214 aaKnown RBP22.71■■□□□ 1.23
CHRDL2-206ENST00000528789 NLGN1Q8N2Q7 840 aa22.71■■□□□ 1.23
CHRDL2-206ENST00000528789 NECTIN2Q92692 538 aa22.71■■□□□ 1.23
CHRDL2-206ENST00000528789 TSR2Q969E8 191 aaKnown RBP22.7■■□□□ 1.22
CHRDL2-206ENST00000528789 FHDC1Q9C0D6 1143 aaPredicted RBP22.7■■□□□ 1.22
CHRDL2-206ENST00000528789 NGEFQ8N5V2 710 aa22.69■■□□□ 1.22
CHRDL2-206ENST00000528789 MYL6BP14649 208 aa22.68■■□□□ 1.22
CHRDL2-206ENST00000528789 DZIP3Q86Y13 1208 aaKnown RBP22.68■■□□□ 1.22
CHRDL2-206ENST00000528789 BCL2L12Q9HB09 334 aa22.68■■□□□ 1.22
CHRDL2-206ENST00000528789 IL16Q14005 1332 aa22.66■■□□□ 1.22
CHRDL2-206ENST00000528789 ELL2O00472 640 aaPredicted RBP22.66■■□□□ 1.22
CHRDL2-206ENST00000528789 DUSP27Q5VZP5 1158 aa22.66■■□□□ 1.22
CHRDL2-206ENST00000528789 WDR63Q8IWG1 891 aa22.66■■□□□ 1.22
CHRDL2-206ENST00000528789 CAMTA2O94983 1202 aa22.65■■□□□ 1.22
CHRDL2-206ENST00000528789 ANXA1P04083 346 aa22.65■■□□□ 1.22
CHRDL2-206ENST00000528789 SYT17Q9BSW7 474 aa22.65■■□□□ 1.22
CHRDL2-206ENST00000528789 DDR1Q08345 913 aa22.64■■□□□ 1.21
CHRDL2-206ENST00000528789 PROSER3Q2NL68 480 aa22.64■■□□□ 1.21
CHRDL2-206ENST00000528789 HDGFL1Q5TGJ6 251 aa22.64■■□□□ 1.21
CHRDL2-206ENST00000528789 BICDL1Q6ZP65 573 aa22.64■■□□□ 1.21
CHRDL2-206ENST00000528789 C8orf58Q8NAV2 365 aa22.64■■□□□ 1.21
CHRDL2-206ENST00000528789 PARP3Q9Y6F1 533 aa22.64■■□□□ 1.21
CHRDL2-206ENST00000528789 SCN7AQ01118 1682 aa22.64■■□□□ 1.21
CHRDL2-206ENST00000528789 ERBB4Q15303 1308 aa22.63■■□□□ 1.21
CHRDL2-206ENST00000528789 PDIA6Q15084 440 aa22.63■■□□□ 1.21
CHRDL2-206ENST00000528789 SPINK5Q9NQ38 1064 aaPredicted RBP22.63■■□□□ 1.21
CHRDL2-206ENST00000528789 HOXB7P09629 217 aa22.62■■□□□ 1.21
CHRDL2-206ENST00000528789 TM4SF1P30408 202 aa22.62■■□□□ 1.21
CHRDL2-206ENST00000528789 NFIXQ14938 502 aa22.62■■□□□ 1.21
CHRDL2-206ENST00000528789 FANCIQ9NVI1 1328 aa22.61■■□□□ 1.21
CHRDL2-206ENST00000528789 TBC1D9BQ66K14 1250 aa22.61■■□□□ 1.21
CHRDL2-206ENST00000528789 TTLL7Q6ZT98 887 aa22.61■■□□□ 1.21
CHRDL2-206ENST00000528789 TSPYL6Q8N831 410 aa22.61■■□□□ 1.21
CHRDL2-206ENST00000528789 NLGN2Q8NFZ4 835 aa22.61■■□□□ 1.21
CHRDL2-206ENST00000528789 CHPF2Q9P2E5 772 aa22.61■■□□□ 1.21
CHRDL2-206ENST00000528789 BCORQ6W2J9 1755 aa22.61■■□□□ 1.21
CHRDL2-206ENST00000528789 POLRMTO00411 1230 aaKnown RBP22.6■■□□□ 1.21
CHRDL2-206ENST00000528789 ZNF521Q96K83 1311 aa22.59■■□□□ 1.21
CHRDL2-206ENST00000528789 KIF6Q6ZMV9 814 aa22.59■■□□□ 1.21
CHRDL2-206ENST00000528789 LRP10Q7Z4F1 713 aa22.59■■□□□ 1.21
CHRDL2-206ENST00000528789 HLFQ16534 295 aa22.58■■□□□ 1.21
CHRDL2-206ENST00000528789 DDX21Q9NR30 783 aaKnown RBP eCLIP22.58■■□□□ 1.21
CHRDL2-206ENST00000528789 AIMP1Q12904 312 aaKnown RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms