RNA–Protein interactions for RNA: ENST00000528145.5

ATG13-210, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-210ENST00000528145 RC3H1Q5TC82 1133 aaKnown RBP17.41■□□□□ 0.38
ATG13-210ENST00000528145 WDR63Q8IWG1 891 aa17.41■□□□□ 0.38
ATG13-210ENST00000528145 PDGFDQ9GZP0 370 aaPredicted RBP17.41■□□□□ 0.38
ATG13-210ENST00000528145 GIGYF1O75420 1035 aaPredicted RBP17.4■□□□□ 0.38
ATG13-210ENST00000528145 KRT24Q2M2I5 525 aa17.4■□□□□ 0.38
ATG13-210ENST00000528145 INTS5Q6P9B9 1019 aaKnown RBP17.4■□□□□ 0.38
ATG13-210ENST00000528145 SMIM5Q71RC9 77 aa17.4■□□□□ 0.38
ATG13-210ENST00000528145 TEX13AQ9BXU3 409 aaPredicted RBP17.4■□□□□ 0.38
ATG13-210ENST00000528145 CCDC87Q9NVE4 849 aa17.4■□□□□ 0.38
ATG13-210ENST00000528145 ZBTB1Q9Y2K1 713 aa17.4■□□□□ 0.38
ATG13-210ENST00000528145 STARD3NLO95772 234 aa17.39■□□□□ 0.37
ATG13-210ENST00000528145 TSR2Q969E8 191 aaKnown RBP17.39■□□□□ 0.37
ATG13-210ENST00000528145 USP16Q9Y5T5 823 aa17.39■□□□□ 0.37
ATG13-210ENST00000528145 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.38■□□□□ 0.37
ATG13-210ENST00000528145 PHF14O94880 888 aa17.38■□□□□ 0.37
ATG13-210ENST00000528145 SSFA2P28290 1259 aa17.38■□□□□ 0.37
ATG13-210ENST00000528145 SPINK5Q9NQ38 1064 aaPredicted RBP17.38■□□□□ 0.37
ATG13-210ENST00000528145 SOS1Q07889 1333 aaPredicted RBP17.38■□□□□ 0.37
ATG13-210ENST00000528145 FANCIQ9NVI1 1328 aa17.38■□□□□ 0.37
ATG13-210ENST00000528145 RPS6KA4O75676 772 aa17.37■□□□□ 0.37
ATG13-210ENST00000528145 COL23A1Q86Y22 540 aaPredicted RBP17.37■□□□□ 0.37
ATG13-210ENST00000528145 RTCBQ9Y3I0 505 aaKnown RBP17.37■□□□□ 0.37
ATG13-210ENST00000528145 COL15A1P39059 1388 aa17.36■□□□□ 0.37
ATG13-210ENST00000528145 A1BGP04217 495 aa17.35■□□□□ 0.37
ATG13-210ENST00000528145 CANXP27824 592 aaKnown RBP17.35■□□□□ 0.37
ATG13-210ENST00000528145 HNRNPUQ00839 825 aaKnown RBP eCLIP17.35■□□□□ 0.37
ATG13-210ENST00000528145 FLAD1Q8NFF5 587 aa17.35■□□□□ 0.37
ATG13-210ENST00000528145 SCN7AQ01118 1682 aa17.35■□□□□ 0.37
ATG13-210ENST00000528145 COL24A1Q17RW2 1714 aa17.35■□□□□ 0.37
ATG13-210ENST00000528145 ADRA2BP18089 450 aa17.34■□□□□ 0.37
ATG13-210ENST00000528145 PIP4K2AP48426 406 aaPredicted RBP17.34■□□□□ 0.37
ATG13-210ENST00000528145 LRP5O75197 1615 aa17.33■□□□□ 0.37
ATG13-210ENST00000528145 NBPF26B4DH59 902 aa17.33■□□□□ 0.36
ATG13-210ENST00000528145 MSH5O43196 834 aa17.33■□□□□ 0.36
ATG13-210ENST00000528145 HOXB7P09629 217 aa17.33■□□□□ 0.36
ATG13-210ENST00000528145 DUSP27Q5VZP5 1158 aa17.33■□□□□ 0.36
ATG13-210ENST00000528145 NBPF10Q6P3W6 841 aaKnown RBP17.33■□□□□ 0.36
ATG13-210ENST00000528145 NBPF15Q8N660 670 aa17.33■□□□□ 0.36
ATG13-210ENST00000528145 C8orf58Q8NAV2 365 aa17.33■□□□□ 0.36
ATG13-210ENST00000528145 BCORQ6W2J9 1755 aa17.33■□□□□ 0.36
ATG13-210ENST00000528145 SRCAPQ6ZRS2 3230 aa17.32■□□□□ 0.36
ATG13-210ENST00000528145 ZBTB7AO95365 584 aa17.32■□□□□ 0.36
ATG13-210ENST00000528145 IL6STP40189 918 aaPredicted RBP17.32■□□□□ 0.36
ATG13-210ENST00000528145 EIF5P55010 431 aaKnown RBP17.32■□□□□ 0.36
ATG13-210ENST00000528145 GOLGA2Q08379 1002 aa17.32■□□□□ 0.36
ATG13-210ENST00000528145 TRAPPC3LQ5T215 181 aa17.32■□□□□ 0.36
ATG13-210ENST00000528145 ARHGEF1Q92888 912 aaKnown RBP17.32■□□□□ 0.36
ATG13-210ENST00000528145 MYH16Q9H6N6 1097 aa17.32■□□□□ 0.36
ATG13-210ENST00000528145 ERBB4Q15303 1308 aa17.31■□□□□ 0.36
ATG13-210ENST00000528145 EIF2S2P20042 333 aaKnown RBP17.31■□□□□ 0.36
ATG13-210ENST00000528145 TSPYL6Q8N831 410 aa17.31■□□□□ 0.36
ATG13-210ENST00000528145 ZNF330Q9Y3S2 320 aaPredicted RBP17.31■□□□□ 0.36
ATG13-210ENST00000528145 USP42Q9H9J4 1324 aaKnown RBP17.3■□□□□ 0.36
ATG13-210ENST00000528145 ELL2O00472 640 aaPredicted RBP17.3■□□□□ 0.36
ATG13-210ENST00000528145 HDGFL1Q5TGJ6 251 aa17.3■□□□□ 0.36
ATG13-210ENST00000528145 SLC16A10Q8TF71 515 aa17.3■□□□□ 0.36
ATG13-210ENST00000528145 NECTIN2Q92692 538 aa17.3■□□□□ 0.36
ATG13-210ENST00000528145 CDCA7LQ96GN5 454 aa17.3■□□□□ 0.36
ATG13-210ENST00000528145 MTFR1LQ9H019 292 aa17.3■□□□□ 0.36
ATG13-210ENST00000528145 E9PSI1 815 aa17.29■□□□□ 0.36
ATG13-210ENST00000528145 RFC4P35249 363 aa17.29■□□□□ 0.36
ATG13-210ENST00000528145 SLFN5Q08AF3 891 aa17.29■□□□□ 0.36
ATG13-210ENST00000528145 PROSER3Q2NL68 480 aa17.29■□□□□ 0.36
ATG13-210ENST00000528145 MSL1Q68DK7 614 aa17.29■□□□□ 0.36
ATG13-210ENST00000528145 SRP68Q9UHB9 627 aaKnown RBP17.29■□□□□ 0.36
ATG13-210ENST00000528145 ZBED9Q6R2W3 1325 aa17.28■□□□□ 0.36
ATG13-210ENST00000528145 EXOSC9Q06265 439 aaKnown RBP17.28■□□□□ 0.36
ATG13-210ENST00000528145 PDIA6Q15084 440 aa17.28■□□□□ 0.36
ATG13-210ENST00000528145 TWISTNBQ3B726 338 aaPredicted RBP17.28■□□□□ 0.36
ATG13-210ENST00000528145 LRP10Q7Z4F1 713 aa17.28■□□□□ 0.36
ATG13-210ENST00000528145 ANXA1P04083 346 aa17.27■□□□□ 0.36
ATG13-210ENST00000528145 MYL6BP14649 208 aa17.27■□□□□ 0.36
ATG13-210ENST00000528145 CHPF2Q9P2E5 772 aa17.27■□□□□ 0.36
ATG13-210ENST00000528145 ATF5Q9Y2D1 282 aaPredicted RBP17.27■□□□□ 0.36
ATG13-210ENST00000528145 A0A087WZG4 1122 aa17.26■□□□□ 0.35
ATG13-210ENST00000528145 GYS1P13807 737 aa17.26■□□□□ 0.35
ATG13-210ENST00000528145 USPL1Q5W0Q7 1092 aa17.26■□□□□ 0.35
ATG13-210ENST00000528145 SPON1Q9HCB6 807 aa17.26■□□□□ 0.35
ATG13-210ENST00000528145 NARFQ9UHQ1 456 aa17.26■□□□□ 0.35
ATG13-210ENST00000528145 PTGER2P43116 358 aa17.25■□□□□ 0.35
ATG13-210ENST00000528145 DZIP3Q86Y13 1208 aaKnown RBP17.25■□□□□ 0.35
ATG13-210ENST00000528145 TRMT2AQ8IZ69 625 aaKnown RBP17.25■□□□□ 0.35
ATG13-210ENST00000528145 SGIP1Q9BQI5 828 aa17.25■□□□□ 0.35
ATG13-210ENST00000528145 DDX21Q9NR30 783 aaKnown RBP eCLIP17.25■□□□□ 0.35
ATG13-210ENST00000528145 TBC1D2BQ9UPU7 963 aa17.25■□□□□ 0.35
ATG13-210ENST00000528145 ZPR1O75312 459 aa17.24■□□□□ 0.35
ATG13-210ENST00000528145 CAMTA2O94983 1202 aa17.24■□□□□ 0.35
ATG13-210ENST00000528145 NPM2Q86SE8 214 aaKnown RBP17.24■□□□□ 0.35
ATG13-210ENST00000528145 BCL2L12Q9HB09 334 aa17.24■□□□□ 0.35
ATG13-210ENST00000528145 VAMP4O75379 141 aa17.23■□□□□ 0.35
ATG13-210ENST00000528145 FKBP8Q14318 412 aa17.23■□□□□ 0.35
ATG13-210ENST00000528145 TTLL7Q6ZT98 887 aa17.23■□□□□ 0.35
ATG13-210ENST00000528145 DBF4Q9UBU7 674 aaPredicted RBP17.23■□□□□ 0.35
ATG13-210ENST00000528145 NUP98P52948 1817 aa17.22■□□□□ 0.35
ATG13-210ENST00000528145 CCDC30Q5VVM6 783 aa17.22■□□□□ 0.35
ATG13-210ENST00000528145 ARXQ96QS3 562 aa17.22■□□□□ 0.35
ATG13-210ENST00000528145 CACNA1FO60840 1977 aa17.21■□□□□ 0.35
ATG13-210ENST00000528145 TCERG1O14776 1098 aaKnown RBP17.21■□□□□ 0.35
ATG13-210ENST00000528145 NLGN1Q8N2Q7 840 aa17.21■□□□□ 0.35
ATG13-210ENST00000528145 XAGE3Q8WTP9 111 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms