RNA–Protein interactions for RNA: ENST00000524873.1

SORL1-203, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-203ENST00000524873 TRAPPC3LQ5T215 181 aa14.47□□□□□ -0.09
SORL1-203ENST00000524873 WWC1Q8IX03 1113 aa14.47□□□□□ -0.09
SORL1-203ENST00000524873 IFT57Q9NWB7 429 aa14.47□□□□□ -0.09
SORL1-203ENST00000524873 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.46□□□□□ -0.09
SORL1-203ENST00000524873 COL23A1Q86Y22 540 aaPredicted RBP14.46□□□□□ -0.09
SORL1-203ENST00000524873 MTFR1LQ9H019 292 aa14.46□□□□□ -0.09
SORL1-203ENST00000524873 SPON1Q9HCB6 807 aa14.46□□□□□ -0.09
SORL1-203ENST00000524873 IL16Q14005 1332 aa14.45□□□□□ -0.1
SORL1-203ENST00000524873 LRP5O75197 1615 aa14.45□□□□□ -0.1
SORL1-203ENST00000524873 GIGYF1O75420 1035 aaPredicted RBP14.45□□□□□ -0.1
SORL1-203ENST00000524873 PHF14O94880 888 aa14.45□□□□□ -0.1
SORL1-203ENST00000524873 ZNF853P0CG23 659 aa14.45□□□□□ -0.1
SORL1-203ENST00000524873 INTS5Q6P9B9 1019 aaKnown RBP14.45□□□□□ -0.1
SORL1-203ENST00000524873 NPM2Q86SE8 214 aaKnown RBP14.45□□□□□ -0.1
SORL1-203ENST00000524873 WDR63Q8IWG1 891 aa14.45□□□□□ -0.1
SORL1-203ENST00000524873 USP16Q9Y5T5 823 aa14.44□□□□□ -0.1
SORL1-203ENST00000524873 A0A087WZG4 1122 aa14.43□□□□□ -0.1
SORL1-203ENST00000524873 RFC4P35249 363 aa14.43□□□□□ -0.1
SORL1-203ENST00000524873 PDGFDQ9GZP0 370 aaPredicted RBP14.43□□□□□ -0.1
SORL1-203ENST00000524873 ZBTB1Q9Y2K1 713 aa14.43□□□□□ -0.1
SORL1-203ENST00000524873 SALL2Q9Y467 1007 aaPredicted RBP14.43□□□□□ -0.1
SORL1-203ENST00000524873 C4AP0C0L4 1744 aa14.43□□□□□ -0.1
SORL1-203ENST00000524873 COL24A1Q17RW2 1714 aa14.43□□□□□ -0.1
SORL1-203ENST00000524873 SOS1Q07889 1333 aaPredicted RBP14.42□□□□□ -0.1
SORL1-203ENST00000524873 ZBTB7AO95365 584 aa14.42□□□□□ -0.1
SORL1-203ENST00000524873 HOXB7P09629 217 aa14.42□□□□□ -0.1
SORL1-203ENST00000524873 CANXP27824 592 aaKnown RBP14.42□□□□□ -0.1
SORL1-203ENST00000524873 IL6STP40189 918 aaPredicted RBP14.42□□□□□ -0.1
SORL1-203ENST00000524873 ARHGEF1Q92888 912 aaKnown RBP14.42□□□□□ -0.1
SORL1-203ENST00000524873 CHMP4AQ9BY43 222 aa14.42□□□□□ -0.1
SORL1-203ENST00000524873 MBIPQ9NS73 344 aa14.42□□□□□ -0.1
SORL1-203ENST00000524873 SENP3-EIF4A1A0A087X0R7 540 aa14.41□□□□□ -0.1
SORL1-203ENST00000524873 PRAMEF22A3QJZ6 481 aa14.41□□□□□ -0.1
SORL1-203ENST00000524873 A1BGP04217 495 aa14.41□□□□□ -0.1
SORL1-203ENST00000524873 AMIGO3Q86WK7 504 aa14.41□□□□□ -0.1
SORL1-203ENST00000524873 ATF5Q9Y2D1 282 aaPredicted RBP14.41□□□□□ -0.1
SORL1-203ENST00000524873 COL15A1P39059 1388 aa14.41□□□□□ -0.1
SORL1-203ENST00000524873 ERBB4Q15303 1308 aa14.41□□□□□ -0.1
SORL1-203ENST00000524873 ZPR1O75312 459 aa14.4□□□□□ -0.1
SORL1-203ENST00000524873 POLD1P28340 1107 aa14.4□□□□□ -0.1
SORL1-203ENST00000524873 EIF5P55010 431 aaKnown RBP14.4□□□□□ -0.1
SORL1-203ENST00000524873 NLGN1Q8N2Q7 840 aa14.39□□□□□ -0.11
SORL1-203ENST00000524873 MYH16Q9H6N6 1097 aa14.39□□□□□ -0.11
SORL1-203ENST00000524873 EIF2S2P20042 333 aaKnown RBP14.38□□□□□ -0.11
SORL1-203ENST00000524873 SMIM5Q71RC9 77 aa14.38□□□□□ -0.11
SORL1-203ENST00000524873 NARFQ9UHQ1 456 aa14.38□□□□□ -0.11
SORL1-203ENST00000524873 ZNF330Q9Y3S2 320 aaPredicted RBP14.38□□□□□ -0.11
SORL1-203ENST00000524873 USP42Q9H9J4 1324 aaKnown RBP14.38□□□□□ -0.11
SORL1-203ENST00000524873 GOLGA2Q08379 1002 aa14.37□□□□□ -0.11
SORL1-203ENST00000524873 DUSP27Q5VZP5 1158 aa14.37□□□□□ -0.11
SORL1-203ENST00000524873 PPP1R1BQ9UD71 204 aaPredicted RBP14.37□□□□□ -0.11
SORL1-203ENST00000524873 ZNF521Q96K83 1311 aa14.37□□□□□ -0.11
SORL1-203ENST00000524873 NBPF26B4DH59 902 aa14.36□□□□□ -0.11
SORL1-203ENST00000524873 GYS1P13807 737 aa14.36□□□□□ -0.11
SORL1-203ENST00000524873 PTGER2P43116 358 aa14.36□□□□□ -0.11
SORL1-203ENST00000524873 NBPF10Q6P3W6 841 aaKnown RBP14.36□□□□□ -0.11
SORL1-203ENST00000524873 NBPF15Q8N660 670 aa14.36□□□□□ -0.11
SORL1-203ENST00000524873 SGIP1Q9BQI5 828 aa14.36□□□□□ -0.11
SORL1-203ENST00000524873 RGL2O15211 777 aa14.35□□□□□ -0.11
SORL1-203ENST00000524873 KRT24Q2M2I5 525 aa14.35□□□□□ -0.11
SORL1-203ENST00000524873 HDGFL1Q5TGJ6 251 aa14.35□□□□□ -0.11
SORL1-203ENST00000524873 MSL1Q68DK7 614 aa14.35□□□□□ -0.11
SORL1-203ENST00000524873 DZIP3Q86Y13 1208 aaKnown RBP14.35□□□□□ -0.11
SORL1-203ENST00000524873 TSR2Q969E8 191 aaKnown RBP14.35□□□□□ -0.11
SORL1-203ENST00000524873 ARXQ96QS3 562 aa14.35□□□□□ -0.11
SORL1-203ENST00000524873 SCN7AQ01118 1682 aa14.35□□□□□ -0.11
SORL1-203ENST00000524873 FANCIQ9NVI1 1328 aa14.35□□□□□ -0.11
SORL1-203ENST00000524873 BCORQ6W2J9 1755 aa14.34□□□□□ -0.11
SORL1-203ENST00000524873 E9PSI1 815 aa14.34□□□□□ -0.11
SORL1-203ENST00000524873 PIP4K2AP48426 406 aaPredicted RBP14.34□□□□□ -0.11
SORL1-203ENST00000524873 USPL1Q5W0Q7 1092 aa14.34□□□□□ -0.11
SORL1-203ENST00000524873 DBF4Q9UBU7 674 aaPredicted RBP14.34□□□□□ -0.11
SORL1-203ENST00000524873 SRP68Q9UHB9 627 aaKnown RBP14.34□□□□□ -0.11
SORL1-203ENST00000524873 ELL2O00472 640 aaPredicted RBP14.33□□□□□ -0.12
SORL1-203ENST00000524873 MYL6BP14649 208 aa14.33□□□□□ -0.12
SORL1-203ENST00000524873 TWISTNBQ3B726 338 aaPredicted RBP14.33□□□□□ -0.12
SORL1-203ENST00000524873 CCDC30Q5VVM6 783 aa14.33□□□□□ -0.12
SORL1-203ENST00000524873 C8orf58Q8NAV2 365 aa14.33□□□□□ -0.12
SORL1-203ENST00000524873 DDX21Q9NR30 783 aaKnown RBP eCLIP14.33□□□□□ -0.12
SORL1-203ENST00000524873 TBC1D2BQ9UPU7 963 aa14.33□□□□□ -0.12
SORL1-203ENST00000524873 ZNF652Q9Y2D9 606 aa14.33□□□□□ -0.12
SORL1-203ENST00000524873 PDIA6Q15084 440 aa14.32□□□□□ -0.12
SORL1-203ENST00000524873 CLEC4GQ6UXB4 293 aa14.32□□□□□ -0.12
SORL1-203ENST00000524873 KIF6Q6ZMV9 814 aa14.32□□□□□ -0.12
SORL1-203ENST00000524873 NECTIN2Q92692 538 aa14.32□□□□□ -0.12
SORL1-203ENST00000524873 PARP3Q9Y6F1 533 aa14.32□□□□□ -0.12
SORL1-203ENST00000524873 CACNA1FO60840 1977 aa14.32□□□□□ -0.12
SORL1-203ENST00000524873 ERVV-1B6SEH8 477 aa14.31□□□□□ -0.12
SORL1-203ENST00000524873 CAMTA2O94983 1202 aa14.31□□□□□ -0.12
SORL1-203ENST00000524873 MMP10P09238 476 aa14.31□□□□□ -0.12
SORL1-203ENST00000524873 HNRNPUQ00839 825 aaKnown RBP eCLIP14.31□□□□□ -0.12
SORL1-203ENST00000524873 FKBP8Q14318 412 aa14.31□□□□□ -0.12
SORL1-203ENST00000524873 SPINK5Q9NQ38 1064 aaPredicted RBP14.31□□□□□ -0.12
SORL1-203ENST00000524873 HYPKQ9NX55 129 aa14.31□□□□□ -0.12
SORL1-203ENST00000524873 NUP98P52948 1817 aa14.3□□□□□ -0.12
SORL1-203ENST00000524873 TM4SF1P30408 202 aa14.3□□□□□ -0.12
SORL1-203ENST00000524873 EXOSC9Q06265 439 aaKnown RBP14.3□□□□□ -0.12
SORL1-203ENST00000524873 SLFN5Q08AF3 891 aa14.3□□□□□ -0.12
SORL1-203ENST00000524873 STK31Q9BXU1 1019 aa14.3□□□□□ -0.12
SORL1-203ENST00000524873 BCL2L12Q9HB09 334 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms