RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 MAPK8IP3Q9UPT6 1336 aa12.62□□□□□ -0.39
PABPC1-222ENST00000523555 BCORQ6W2J9 1755 aa12.62□□□□□ -0.39
PABPC1-222ENST00000523555 SCN7AQ01118 1682 aa12.62□□□□□ -0.39
PABPC1-222ENST00000523555 HTATSF1O43719 755 aaKnown RBP12.62□□□□□ -0.39
PABPC1-222ENST00000523555 ADRA2BP18089 450 aa12.62□□□□□ -0.39
PABPC1-222ENST00000523555 ADAMTS8Q9UP79 889 aa12.62□□□□□ -0.39
PABPC1-222ENST00000523555 RRP7AQ9Y3A4 280 aaKnown RBP12.62□□□□□ -0.39
PABPC1-222ENST00000523555 USP42Q9H9J4 1324 aaKnown RBP12.62□□□□□ -0.39
PABPC1-222ENST00000523555 COL15A1P39059 1388 aa12.61□□□□□ -0.39
PABPC1-222ENST00000523555 CHD4Q14839 1912 aa12.61□□□□□ -0.39
PABPC1-222ENST00000523555 MMP10P09238 476 aa12.61□□□□□ -0.39
PABPC1-222ENST00000523555 CANXP27824 592 aaKnown RBP12.61□□□□□ -0.39
PABPC1-222ENST00000523555 RFC4P35249 363 aa12.61□□□□□ -0.39
PABPC1-222ENST00000523555 PIP4K2AP48426 406 aaPredicted RBP12.61□□□□□ -0.39
PABPC1-222ENST00000523555 FKBP8Q14318 412 aa12.61□□□□□ -0.39
PABPC1-222ENST00000523555 FMNL2Q96PY5 1086 aa12.61□□□□□ -0.39
PABPC1-222ENST00000523555 USP16Q9Y5T5 823 aa12.61□□□□□ -0.39
PABPC1-222ENST00000523555 BRCA1P38398 1863 aaKnown RBP12.61□□□□□ -0.39
PABPC1-222ENST00000523555 A1BGP04217 495 aa12.6□□□□□ -0.39
PABPC1-222ENST00000523555 NEFMP07197 916 aa12.6□□□□□ -0.39
PABPC1-222ENST00000523555 TMPOP42166 694 aaKnown RBP12.6□□□□□ -0.39
PABPC1-222ENST00000523555 NRXN2Q9P2S2 1712 aa12.59□□□□□ -0.39
PABPC1-222ENST00000523555 RIPK4P57078 832 aa12.59□□□□□ -0.39
PABPC1-222ENST00000523555 WDR43Q15061 677 aaKnown RBP eCLIP12.59□□□□□ -0.39
PABPC1-222ENST00000523555 TAF7Q15545 349 aaPredicted RBP12.59□□□□□ -0.39
PABPC1-222ENST00000523555 USPL1Q5W0Q7 1092 aa12.59□□□□□ -0.39
PABPC1-222ENST00000523555 BCL2L12Q9HB09 334 aa12.59□□□□□ -0.39
PABPC1-222ENST00000523555 EIF5P55010 431 aaKnown RBP12.58□□□□□ -0.4
PABPC1-222ENST00000523555 DDR1Q08345 913 aa12.58□□□□□ -0.4
PABPC1-222ENST00000523555 NEUROD2Q15784 382 aa12.58□□□□□ -0.4
PABPC1-222ENST00000523555 PNNQ9H307 717 aaKnown RBP12.58□□□□□ -0.4
PABPC1-222ENST00000523555 WWC3Q9ULE0 1092 aa12.58□□□□□ -0.4
PABPC1-222ENST00000523555 C10orf71Q711Q0 1435 aa12.57□□□□□ -0.4
PABPC1-222ENST00000523555 STARD3NLO95772 234 aa12.57□□□□□ -0.4
PABPC1-222ENST00000523555 YBX3P16989 372 aaKnown RBP eCLIP12.57□□□□□ -0.43e-36■□□□□ 10.8
PABPC1-222ENST00000523555 NLGN1Q8N2Q7 840 aa12.57□□□□□ -0.4
PABPC1-222ENST00000523555 RUNDC1Q96C34 613 aa12.57□□□□□ -0.4
PABPC1-222ENST00000523555 TRIM35Q9UPQ4 493 aa12.57□□□□□ -0.4
PABPC1-222ENST00000523555 SENP3-EIF4A1A0A087X0R7 540 aa12.56□□□□□ -0.4
PABPC1-222ENST00000523555 PELP1Q8IZL8 1130 aaKnown RBP12.56□□□□□ -0.4
PABPC1-222ENST00000523555 NARFQ9UHQ1 456 aa12.56□□□□□ -0.4
PABPC1-222ENST00000523555 ZNF330Q9Y3S2 320 aaPredicted RBP12.56□□□□□ -0.4
PABPC1-222ENST00000523555 CD2APQ9Y5K6 639 aa12.56□□□□□ -0.4
PABPC1-222ENST00000523555 PXDNLA1KZ92 1463 aa12.56□□□□□ -0.4
PABPC1-222ENST00000523555 ANKRD31Q8N7Z5 1873 aa12.56□□□□□ -0.4
PABPC1-222ENST00000523555 NBPF26B4DH59 902 aa12.55□□□□□ -0.4
PABPC1-222ENST00000523555 POLRMTO00411 1230 aaKnown RBP12.55□□□□□ -0.4
PABPC1-222ENST00000523555 SNRPA1P09661 255 aaKnown RBP12.55□□□□□ -0.4
PABPC1-222ENST00000523555 TM4SF1P30408 202 aa12.55□□□□□ -0.4
PABPC1-222ENST00000523555 EIF4A1P60842 406 aaKnown RBP12.55□□□□□ -0.4
PABPC1-222ENST00000523555 NBPF10Q6P3W6 841 aaKnown RBP12.55□□□□□ -0.4
PABPC1-222ENST00000523555 NBPF15Q8N660 670 aa12.55□□□□□ -0.4
PABPC1-222ENST00000523555 TEX13AQ9BXU3 409 aaPredicted RBP12.55□□□□□ -0.4
PABPC1-222ENST00000523555 TBC1D2BQ9UPU7 963 aa12.55□□□□□ -0.4
PABPC1-222ENST00000523555 NUP98P52948 1817 aa12.54□□□□□ -0.4
PABPC1-222ENST00000523555 ZPR1O75312 459 aa12.54□□□□□ -0.4
PABPC1-222ENST00000523555 IL6STP40189 918 aaPredicted RBP12.54□□□□□ -0.4
PABPC1-222ENST00000523555 NFIXQ14938 502 aa12.54□□□□□ -0.4
PABPC1-222ENST00000523555 GPR162Q16538 588 aa12.54□□□□□ -0.4
PABPC1-222ENST00000523555 PARP3Q9Y6F1 533 aa12.54□□□□□ -0.4
PABPC1-222ENST00000523555 DLEC1Q9Y238 1755 aa12.53□□□□□ -0.4
PABPC1-222ENST00000523555 APAF1O14727 1248 aa12.53□□□□□ -0.4
PABPC1-222ENST00000523555 GIGYF1O75420 1035 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-222ENST00000523555 KRT24Q2M2I5 525 aa12.53□□□□□ -0.4
PABPC1-222ENST00000523555 TSPYL4Q9UJ04 414 aa12.53□□□□□ -0.4
PABPC1-222ENST00000523555 CARMIL3Q8ND23 1372 aa12.53□□□□□ -0.4
PABPC1-222ENST00000523555 COL11A2P13942 1736 aaPredicted RBP12.52□□□□□ -0.41
PABPC1-222ENST00000523555 CAMTA2O94983 1202 aa12.52□□□□□ -0.41
PABPC1-222ENST00000523555 TBC1D9BQ66K14 1250 aa12.52□□□□□ -0.41
PABPC1-222ENST00000523555 PNISRQ8TF01 805 aaKnown RBP12.52□□□□□ -0.41
PABPC1-222ENST00000523555 ARFGEF1Q9Y6D6 1849 aa12.52□□□□□ -0.41
PABPC1-222ENST00000523555 CACNA1SQ13698 1873 aa12.52□□□□□ -0.41
PABPC1-222ENST00000523555 A0A0G2JLW4 131 aa12.51□□□□□ -0.41
PABPC1-222ENST00000523555 DCAF8L1A6NGE4 600 aa12.51□□□□□ -0.41
PABPC1-222ENST00000523555 ANP32CO43423 234 aa12.51□□□□□ -0.41
PABPC1-222ENST00000523555 YY1P25490 414 aa12.51□□□□□ -0.41
PABPC1-222ENST00000523555 BICDL1Q6ZP65 573 aa12.51□□□□□ -0.41
PABPC1-222ENST00000523555 DPEP1P16444 411 aa12.5□□□□□ -0.41
PABPC1-222ENST00000523555 KCNA3P22001 575 aa12.5□□□□□ -0.41
PABPC1-222ENST00000523555 LMOD3Q0VAK6 560 aa12.5□□□□□ -0.41
PABPC1-222ENST00000523555 DZIP3Q86Y13 1208 aaKnown RBP12.5□□□□□ -0.41
PABPC1-222ENST00000523555 MRS2Q9HD23 443 aa12.5□□□□□ -0.41
PABPC1-222ENST00000523555 LAS1LQ9Y4W2 734 aaKnown RBP12.5□□□□□ -0.41
PABPC1-222ENST00000523555 A0A087WZG4 1122 aa12.49□□□□□ -0.41
PABPC1-222ENST00000523555 CHL1O00533 1208 aa12.49□□□□□ -0.41
PABPC1-222ENST00000523555 SERPINB2P05120 415 aa12.49□□□□□ -0.41
PABPC1-222ENST00000523555 CCDC24Q8N4L8 307 aa12.49□□□□□ -0.41
PABPC1-222ENST00000523555 NGEFQ8N5V2 710 aa12.49□□□□□ -0.41
PABPC1-222ENST00000523555 ANXA1P04083 346 aa12.48□□□□□ -0.41
PABPC1-222ENST00000523555 MYL6BP14649 208 aa12.48□□□□□ -0.41
PABPC1-222ENST00000523555 CHRNA5P30532 468 aa12.48□□□□□ -0.41
PABPC1-222ENST00000523555 TGFB2P61812 414 aa12.48□□□□□ -0.41
PABPC1-222ENST00000523555 HLFQ16534 295 aa12.48□□□□□ -0.41
PABPC1-222ENST00000523555 PROSER3Q2NL68 480 aa12.48□□□□□ -0.41
PABPC1-222ENST00000523555 TTLL7Q6ZT98 887 aa12.48□□□□□ -0.41
PABPC1-222ENST00000523555 EIF2S2P20042 333 aaKnown RBP12.47□□□□□ -0.41
PABPC1-222ENST00000523555 PDIA6Q15084 440 aa12.47□□□□□ -0.41
PABPC1-222ENST00000523555 LRP10Q7Z4F1 713 aa12.47□□□□□ -0.41
PABPC1-222ENST00000523555 NECTIN2Q92692 538 aa12.47□□□□□ -0.41
PABPC1-222ENST00000523555 BABAM1Q9NWV8 329 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms