RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 NCBP3Q53F19 620 aaKnown RBP26.39■■□□□ 1.82
HOXC6-204ENST00000509328 ADRA2BP18089 450 aa26.38■■□□□ 1.81
HOXC6-204ENST00000509328 CALD1Q05682 793 aaKnown RBP26.38■■□□□ 1.81
HOXC6-204ENST00000509328 CCDC27Q2M243 656 aa26.38■■□□□ 1.81
HOXC6-204ENST00000509328 MIER1Q8N108 512 aa26.38■■□□□ 1.81
HOXC6-204ENST00000509328 C4AP0C0L4 1744 aa26.37■■□□□ 1.81
HOXC6-204ENST00000509328 EIF4A1P60842 406 aaKnown RBP26.37■■□□□ 1.81
HOXC6-204ENST00000509328 TRAPPC3LQ5T215 181 aa26.37■■□□□ 1.81
HOXC6-204ENST00000509328 SMIM5Q71RC9 77 aa26.37■■□□□ 1.81
HOXC6-204ENST00000509328 CHL1O00533 1208 aa26.36■■□□□ 1.81
HOXC6-204ENST00000509328 ATF5Q9Y2D1 282 aaPredicted RBP26.36■■□□□ 1.81
HOXC6-204ENST00000509328 LAS1LQ9Y4W2 734 aaKnown RBP26.36■■□□□ 1.81
HOXC6-204ENST00000509328 CFAP44Q96MT7 982 aa26.35■■□□□ 1.81
HOXC6-204ENST00000509328 SENP3-EIF4A1A0A087X0R7 540 aa26.34■■□□□ 1.81
HOXC6-204ENST00000509328 ZBTB1Q9Y2K1 713 aa26.34■■□□□ 1.81
HOXC6-204ENST00000509328 USP16Q9Y5T5 823 aa26.34■■□□□ 1.81
HOXC6-204ENST00000509328 PRAMEF22A3QJZ6 481 aa26.33■■□□□ 1.81
HOXC6-204ENST00000509328 ARHGEF1Q92888 912 aaKnown RBP26.33■■□□□ 1.81
HOXC6-204ENST00000509328 SOS1Q07889 1333 aaPredicted RBP26.33■■□□□ 1.81
HOXC6-204ENST00000509328 GIGYF1O75420 1035 aaPredicted RBP26.32■■□□□ 1.8
HOXC6-204ENST00000509328 WWC1Q8IX03 1113 aa26.32■■□□□ 1.8
HOXC6-204ENST00000509328 IFT57Q9NWB7 429 aa26.32■■□□□ 1.8
HOXC6-204ENST00000509328 ZNF853P0CG23 659 aa26.31■■□□□ 1.8
HOXC6-204ENST00000509328 CANXP27824 592 aaKnown RBP26.31■■□□□ 1.8
HOXC6-204ENST00000509328 RFC4P35249 363 aa26.31■■□□□ 1.8
HOXC6-204ENST00000509328 PTGER2P43116 358 aa26.31■■□□□ 1.8
HOXC6-204ENST00000509328 GNAI1P63096 354 aa26.31■■□□□ 1.8
HOXC6-204ENST00000509328 NGEFQ8N5V2 710 aa26.31■■□□□ 1.8
HOXC6-204ENST00000509328 A1BGP04217 495 aa26.29■■□□□ 1.8
HOXC6-204ENST00000509328 SGIP1Q9BQI5 828 aa26.29■■□□□ 1.8
HOXC6-204ENST00000509328 MBIPQ9NS73 344 aa26.28■■□□□ 1.8
HOXC6-204ENST00000509328 COL15A1P39059 1388 aa26.28■■□□□ 1.8
HOXC6-204ENST00000509328 IL6STP40189 918 aaPredicted RBP26.27■■□□□ 1.8
HOXC6-204ENST00000509328 EIF5P55010 431 aaKnown RBP26.27■■□□□ 1.8
HOXC6-204ENST00000509328 SALL2Q9Y467 1007 aaPredicted RBP26.27■■□□□ 1.8
HOXC6-204ENST00000509328 POLD1P28340 1107 aa26.26■■□□□ 1.79
HOXC6-204ENST00000509328 MSL1Q68DK7 614 aa26.26■■□□□ 1.79
HOXC6-204ENST00000509328 SRCAPQ6ZRS2 3230 aa26.26■■□□□ 1.79
HOXC6-204ENST00000509328 IL16Q14005 1332 aa26.25■■□□□ 1.79
HOXC6-204ENST00000509328 PPP1R1BQ9UD71 204 aaPredicted RBP26.25■■□□□ 1.79
HOXC6-204ENST00000509328 USP42Q9H9J4 1324 aaKnown RBP26.24■■□□□ 1.79
HOXC6-204ENST00000509328 A0A087WZG4 1122 aa26.24■■□□□ 1.79
HOXC6-204ENST00000509328 WDR63Q8IWG1 891 aa26.24■■□□□ 1.79
HOXC6-204ENST00000509328 NPM2Q86SE8 214 aaKnown RBP26.23■■□□□ 1.79
HOXC6-204ENST00000509328 ZPR1O75312 459 aa26.22■■□□□ 1.79
HOXC6-204ENST00000509328 GYS1P13807 737 aa26.22■■□□□ 1.79
HOXC6-204ENST00000509328 NLGN1Q8N2Q7 840 aa26.22■■□□□ 1.79
HOXC6-204ENST00000509328 SRP68Q9UHB9 627 aaKnown RBP26.22■■□□□ 1.79
HOXC6-204ENST00000509328 NARFQ9UHQ1 456 aa26.22■■□□□ 1.79
HOXC6-204ENST00000509328 ZNF330Q9Y3S2 320 aaPredicted RBP26.22■■□□□ 1.79
HOXC6-204ENST00000509328 NBPF26B4DH59 902 aa26.21■■□□□ 1.79
HOXC6-204ENST00000509328 PIP4K2AP48426 406 aaPredicted RBP26.21■■□□□ 1.79
HOXC6-204ENST00000509328 KRT24Q2M2I5 525 aa26.21■■□□□ 1.79
HOXC6-204ENST00000509328 NBPF10Q6P3W6 841 aaKnown RBP26.21■■□□□ 1.79
HOXC6-204ENST00000509328 NBPF15Q8N660 670 aa26.21■■□□□ 1.79
HOXC6-204ENST00000509328 ARXQ96QS3 562 aa26.21■■□□□ 1.79
HOXC6-204ENST00000509328 ERBB4Q15303 1308 aa26.2■■□□□ 1.79
HOXC6-204ENST00000509328 SCN7AQ01118 1682 aa26.2■■□□□ 1.78
HOXC6-204ENST00000509328 HOXB7P09629 217 aa26.2■■□□□ 1.78
HOXC6-204ENST00000509328 USPL1Q5W0Q7 1092 aa26.19■■□□□ 1.78
HOXC6-204ENST00000509328 BCORQ6W2J9 1755 aa26.19■■□□□ 1.78
HOXC6-204ENST00000509328 EIF2S2P20042 333 aaKnown RBP26.18■■□□□ 1.78
HOXC6-204ENST00000509328 DUSP27Q5VZP5 1158 aa26.17■■□□□ 1.78
HOXC6-204ENST00000509328 TSR2Q969E8 191 aaKnown RBP26.16■■□□□ 1.78
HOXC6-204ENST00000509328 TBC1D2BQ9UPU7 963 aa26.16■■□□□ 1.78
HOXC6-204ENST00000509328 ZNF521Q96K83 1311 aa26.15■■□□□ 1.78
HOXC6-204ENST00000509328 FKBP8Q14318 412 aa26.15■■□□□ 1.78
HOXC6-204ENST00000509328 DZIP3Q86Y13 1208 aaKnown RBP26.15■■□□□ 1.78
HOXC6-204ENST00000509328 MMP10P09238 476 aa26.14■■□□□ 1.78
HOXC6-204ENST00000509328 MYL6BP14649 208 aa26.13■■□□□ 1.77
HOXC6-204ENST00000509328 HDGFL1Q5TGJ6 251 aa26.13■■□□□ 1.77
HOXC6-204ENST00000509328 BCL2L12Q9HB09 334 aa26.13■■□□□ 1.77
HOXC6-204ENST00000509328 CAMTA2O94983 1202 aa26.12■■□□□ 1.77
HOXC6-204ENST00000509328 PDIA6Q15084 440 aa26.12■■□□□ 1.77
HOXC6-204ENST00000509328 C8orf58Q8NAV2 365 aa26.12■■□□□ 1.77
HOXC6-204ENST00000509328 NECTIN2Q92692 538 aa26.12■■□□□ 1.77
HOXC6-204ENST00000509328 FANCIQ9NVI1 1328 aa26.12■■□□□ 1.77
HOXC6-204ENST00000509328 FHDC1Q9C0D6 1143 aaPredicted RBP26.11■■□□□ 1.77
HOXC6-204ENST00000509328 ELL2O00472 640 aaPredicted RBP26.1■■□□□ 1.77
HOXC6-204ENST00000509328 TM4SF1P30408 202 aa26.1■■□□□ 1.77
HOXC6-204ENST00000509328 MYH16Q9H6N6 1097 aa26.1■■□□□ 1.77
HOXC6-204ENST00000509328 PARP3Q9Y6F1 533 aa26.1■■□□□ 1.77
HOXC6-204ENST00000509328 NUP98P52948 1817 aa26.09■■□□□ 1.77
HOXC6-204ENST00000509328 GOLGA2Q08379 1002 aa26.09■■□□□ 1.77
HOXC6-204ENST00000509328 CHMP4AQ9BY43 222 aa26.09■■□□□ 1.77
HOXC6-204ENST00000509328 SPINK5Q9NQ38 1064 aaPredicted RBP26.09■■□□□ 1.77
HOXC6-204ENST00000509328 DDX21Q9NR30 783 aaKnown RBP eCLIP26.09■■□□□ 1.77
HOXC6-204ENST00000509328 RGL2O15211 777 aa26.08■■□□□ 1.77
HOXC6-204ENST00000509328 PROSER3Q2NL68 480 aa26.08■■□□□ 1.77
HOXC6-204ENST00000509328 LRP10Q7Z4F1 713 aa26.08■■□□□ 1.77
HOXC6-204ENST00000509328 DBF4Q9UBU7 674 aaPredicted RBP26.08■■□□□ 1.77
HOXC6-204ENST00000509328 AFDNP55196 1824 aaKnown RBP26.08■■□□□ 1.77
HOXC6-204ENST00000509328 KIF13BQ9NQT8 1826 aa26.07■■□□□ 1.76
HOXC6-204ENST00000509328 NFIXQ14938 502 aa26.07■■□□□ 1.76
HOXC6-204ENST00000509328 CLEC4GQ6UXB4 293 aa26.07■■□□□ 1.76
HOXC6-204ENST00000509328 KLHL34Q8N239 644 aa26.07■■□□□ 1.76
HOXC6-204ENST00000509328 TSPYL6Q8N831 410 aa26.07■■□□□ 1.76
HOXC6-204ENST00000509328 SYT17Q9BSW7 474 aa26.07■■□□□ 1.76
HOXC6-204ENST00000509328 CHPF2Q9P2E5 772 aa26.07■■□□□ 1.76
HOXC6-204ENST00000509328 ZNF652Q9Y2D9 606 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms