RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 SH3PXD2AQ5TCZ1 1133 aa13.74□□□□□ -0.21
CHD1-205ENST00000508756 TERTO14746 1132 aaKnown RBP13.73□□□□□ -0.21
CHD1-205ENST00000508756 PSMA6P60900 246 aaKnown RBP13.73□□□□□ -0.21
CHD1-205ENST00000508756 TEAD4Q15561 434 aa13.73□□□□□ -0.21
CHD1-205ENST00000508756 CHMP7Q8WUX9 453 aaPredicted RBP13.73□□□□□ -0.21
CHD1-205ENST00000508756 L3MBTL2Q969R5 705 aa13.73□□□□□ -0.21
CHD1-205ENST00000508756 AIDAQ96BJ3 306 aa13.73□□□□□ -0.21
CHD1-205ENST00000508756 GPAMQ9HCL2 828 aa13.73□□□□□ -0.21
CHD1-205ENST00000508756 A0A1B0GTH6 734 aa13.72□□□□□ -0.21
CHD1-205ENST00000508756 NOS2P35228 1153 aa13.72□□□□□ -0.21
CHD1-205ENST00000508756 PRIMPOLQ96LW4 560 aa13.72□□□□□ -0.21
CHD1-205ENST00000508756 CUEDC1Q9NWM3 386 aaPredicted RBP13.72□□□□□ -0.21
CHD1-205ENST00000508756 ZNF232Q9UNY5 417 aa13.72□□□□□ -0.21
CHD1-205ENST00000508756 SERTM1A2A2V5 107 aa13.71□□□□□ -0.21
CHD1-205ENST00000508756 CARNS1A5YM72 827 aa13.71□□□□□ -0.21
CHD1-205ENST00000508756 EML1O00423 815 aa13.71□□□□□ -0.21
CHD1-205ENST00000508756 PRMT3O60678 531 aa13.71□□□□□ -0.21
CHD1-205ENST00000508756 CSB-PGBD3P0DP91 1061 aa13.71□□□□□ -0.21
CHD1-205ENST00000508756 ITGA6P23229 1130 aa13.71□□□□□ -0.21
CHD1-205ENST00000508756 MSX1P28360 303 aa13.71□□□□□ -0.21
CHD1-205ENST00000508756 WEE1P30291 646 aa13.71□□□□□ -0.21
CHD1-205ENST00000508756 RIPOR1Q6ZS17 1223 aa13.71□□□□□ -0.21
CHD1-205ENST00000508756 SLAIN2Q9P270 581 aa13.71□□□□□ -0.21
CHD1-205ENST00000508756 TMEM88BA6NKF7 163 aa13.7□□□□□ -0.22
CHD1-205ENST00000508756 H3BM21 787 aa13.7□□□□□ -0.22
CHD1-205ENST00000508756 IGFBP4P22692 258 aa13.7□□□□□ -0.22
CHD1-205ENST00000508756 TXLNAP40222 546 aa13.7□□□□□ -0.22
CHD1-205ENST00000508756 F11P03951 625 aa13.69□□□□□ -0.22
CHD1-205ENST00000508756 ATP4AP20648 1035 aa13.69□□□□□ -0.22
CHD1-205ENST00000508756 OCLNQ16625 522 aa13.68□□□□□ -0.22
CHD1-205ENST00000508756 NBPF1Q3BBV0 1214 aa13.68□□□□□ -0.22
CHD1-205ENST00000508756 NPAS3Q8IXF0 933 aa13.68□□□□□ -0.22
CHD1-205ENST00000508756 NFX1Q12986 1120 aaKnown RBP13.67□□□□□ -0.22
CHD1-205ENST00000508756 RETREG2Q8NC44 543 aa13.67□□□□□ -0.22
CHD1-205ENST00000508756 CLP1Q92989 425 aaKnown RBP13.67□□□□□ -0.22
CHD1-205ENST00000508756 C2orf49Q9BVC5 232 aaPredicted RBP13.67□□□□□ -0.22
CHD1-205ENST00000508756 RUBCNLQ9H714 662 aa13.67□□□□□ -0.22
CHD1-205ENST00000508756 CHMP3Q9Y3E7 222 aa13.67□□□□□ -0.22
CHD1-205ENST00000508756 POTEAQ6S8J7 498 aa13.66□□□□□ -0.22
CHD1-205ENST00000508756 HCN4Q9Y3Q4 1203 aa13.66□□□□□ -0.22
CHD1-205ENST00000508756 CDC14CA4D256 554 aa13.65□□□□□ -0.22
CHD1-205ENST00000508756 STAG2Q8N3U4 1231 aa13.65□□□□□ -0.22
CHD1-205ENST00000508756 ZDHHC3Q9NYG2 299 aa13.65□□□□□ -0.22
CHD1-205ENST00000508756 HIRAP54198 1017 aaPredicted RBP13.64□□□□□ -0.23
CHD1-205ENST00000508756 FKBP5Q13451 457 aaPredicted RBP13.64□□□□□ -0.23
CHD1-205ENST00000508756 DBN1Q16643 649 aa13.64□□□□□ -0.23
CHD1-205ENST00000508756 VWA5B2Q8N398 1253 aa13.64□□□□□ -0.23
CHD1-205ENST00000508756 ERBB4Q15303 1308 aa13.64□□□□□ -0.23
CHD1-205ENST00000508756 THBS1P07996 1170 aa13.63□□□□□ -0.23
CHD1-205ENST00000508756 TATP17735 454 aaPredicted RBP13.63□□□□□ -0.23
CHD1-205ENST00000508756 LCE2CQ5TA81 110 aa13.63□□□□□ -0.23
CHD1-205ENST00000508756 TRIM22Q8IYM9 498 aa13.63□□□□□ -0.23
CHD1-205ENST00000508756 C1orf216Q8TAB5 229 aa13.63□□□□□ -0.23
CHD1-205ENST00000508756 SLC16A10Q8TF71 515 aa13.63□□□□□ -0.23
CHD1-205ENST00000508756 ZNF837Q96EG3 531 aaPredicted RBP13.63□□□□□ -0.23
CHD1-205ENST00000508756 FOXO3O43524 673 aa13.62□□□□□ -0.23
CHD1-205ENST00000508756 PGBD3Q8N328 593 aa13.62□□□□□ -0.23
CHD1-205ENST00000508756 NGLY1Q96IV0 654 aa13.62□□□□□ -0.23
CHD1-205ENST00000508756 PHACTR1Q9C0D0 580 aa13.62□□□□□ -0.23
CHD1-205ENST00000508756 CXXC1Q9P0U4 656 aaPredicted RBP13.62□□□□□ -0.23
CHD1-205ENST00000508756 WFS1O76024 890 aa13.61□□□□□ -0.23
CHD1-205ENST00000508756 ATP2B4P23634 1241 aa13.61□□□□□ -0.23
CHD1-205ENST00000508756 ARSJQ5FYB0 599 aaPredicted RBP13.61□□□□□ -0.23
CHD1-205ENST00000508756 KLRG1Q96E93 195 aa13.61□□□□□ -0.23
CHD1-205ENST00000508756 NUCKS1Q9H1E3 243 aaKnown RBP13.61□□□□□ -0.23
CHD1-205ENST00000508756 NANOS1Q8WY41 292 aaKnown RBP13.6□□□□□ -0.23
CHD1-205ENST00000508756 CRISPLD1Q9H336 500 aa13.6□□□□□ -0.23
CHD1-205ENST00000508756 USTQ9Y2C2 406 aa13.6□□□□□ -0.23
CHD1-205ENST00000508756 H7C1W4 665 aa13.59□□□□□ -0.23
CHD1-205ENST00000508756 BICDL1Q6ZP65 573 aa13.59□□□□□ -0.23
CHD1-205ENST00000508756 ALDH16A1Q8IZ83 802 aa13.59□□□□□ -0.23
CHD1-205ENST00000508756 ZIC5Q96T25 663 aa13.59□□□□□ -0.23
CHD1-205ENST00000508756 MKNK1Q9BUB5 465 aa13.59□□□□□ -0.23
CHD1-205ENST00000508756 A0A1W2PNR3 127 aa13.58□□□□□ -0.24
CHD1-205ENST00000508756 VSIG8P0DPA2 414 aa13.58□□□□□ -0.24
CHD1-205ENST00000508756 TREML4Q6UXN2 200 aa13.58□□□□□ -0.24
CHD1-205ENST00000508756 SV2AQ7L0J3 742 aa13.58□□□□□ -0.24
CHD1-205ENST00000508756 GPR161Q8N6U8 529 aaKnown RBP13.58□□□□□ -0.24
CHD1-205ENST00000508756 RHPN1Q8TCX5 695 aa13.58□□□□□ -0.24
CHD1-205ENST00000508756 C7orf43Q8WVR3 580 aa13.58□□□□□ -0.24
CHD1-205ENST00000508756 IRF7Q92985 503 aa13.58□□□□□ -0.24
CHD1-205ENST00000508756 GTPBP3Q969Y2 492 aaKnown RBP13.58□□□□□ -0.24
CHD1-205ENST00000508756 VTI1AQ96AJ9 217 aa13.58□□□□□ -0.24
CHD1-205ENST00000508756 C1orf53Q5VUE5 145 aa13.57□□□□□ -0.24
CHD1-205ENST00000508756 GPR25O00155 361 aa13.56□□□□□ -0.24
CHD1-205ENST00000508756 EFHC2Q5JST6 749 aa13.56□□□□□ -0.24
CHD1-205ENST00000508756 CAPN12Q6ZSI9 719 aa13.56□□□□□ -0.24
CHD1-205ENST00000508756 GMCL1Q96IK5 515 aa13.56□□□□□ -0.24
CHD1-205ENST00000508756 SCNN1AP37088 669 aa13.55□□□□□ -0.24
CHD1-205ENST00000508756 LCE2AQ5TA79 106 aaPredicted RBP13.55□□□□□ -0.24
CHD1-205ENST00000508756 QTRT2Q9H974 415 aaKnown RBP13.55□□□□□ -0.24
CHD1-205ENST00000508756 UBAP2LQ14157 1087 aaKnown RBP13.54□□□□□ -0.24
CHD1-205ENST00000508756 SSFA2P28290 1259 aa13.53□□□□□ -0.24
CHD1-205ENST00000508756 LBRQ14739 615 aaKnown RBP13.53□□□□□ -0.24
CHD1-205ENST00000508756 LRRC69Q6ZNQ3 347 aa13.53□□□□□ -0.24
CHD1-205ENST00000508756 HSH2DQ96JZ2 352 aa13.53□□□□□ -0.24
CHD1-205ENST00000508756 RTN1Q16799 776 aa13.52□□□□□ -0.25
CHD1-205ENST00000508756 NLRP8Q86W28 1048 aa13.52□□□□□ -0.25
CHD1-205ENST00000508756 GJA3Q9Y6H8 435 aa13.52□□□□□ -0.25
CHD1-205ENST00000508756 GMPRP36959 345 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms