RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 SNRPA1P09661 255 aaKnown RBP27.1■■□□□ 1.93
DDR1-255ENST00000504927 ARHGEF1Q92888 912 aaKnown RBP27.1■■□□□ 1.93
DDR1-255ENST00000504927 UBR2Q8IWV8 1755 aa27.09■■□□□ 1.93
DDR1-255ENST00000504927 RFC4P35249 363 aa27.09■■□□□ 1.93
DDR1-255ENST00000504927 MYH14Q7Z406 1995 aaKnown RBP27.08■■□□□ 1.93
DDR1-255ENST00000504927 ARXQ96QS3 562 aa27.07■■□□□ 1.92
DDR1-255ENST00000504927 MSL1Q68DK7 614 aa27.06■■□□□ 1.92
DDR1-255ENST00000504927 TSPYL4Q9UJ04 414 aa27.06■■□□□ 1.92
DDR1-255ENST00000504927 EIF4A1P60842 406 aaKnown RBP27.04■■□□□ 1.92
DDR1-255ENST00000504927 CALD1Q05682 793 aaKnown RBP27.04■■□□□ 1.92
DDR1-255ENST00000504927 NCBP3Q53F19 620 aaKnown RBP27.04■■□□□ 1.92
DDR1-255ENST00000504927 NLGN1Q8N2Q7 840 aa27.04■■□□□ 1.92
DDR1-255ENST00000504927 ZBTB1Q9Y2K1 713 aa27.04■■□□□ 1.92
DDR1-255ENST00000504927 USP16Q9Y5T5 823 aa27.04■■□□□ 1.92
DDR1-255ENST00000504927 SOS1Q07889 1333 aaPredicted RBP27.04■■□□□ 1.92
DDR1-255ENST00000504927 FHDC1Q9C0D6 1143 aaPredicted RBP27.03■■□□□ 1.92
DDR1-255ENST00000504927 CHL1O00533 1208 aa27.02■■□□□ 1.92
DDR1-255ENST00000504927 CANXP27824 592 aaKnown RBP27.02■■□□□ 1.92
DDR1-255ENST00000504927 A0A087WZG4 1122 aa27.01■■□□□ 1.91
DDR1-255ENST00000504927 GIGYF1O75420 1035 aaPredicted RBP27.01■■□□□ 1.91
DDR1-255ENST00000504927 FAM9BQ8IZU0 186 aa27.01■■□□□ 1.91
DDR1-255ENST00000504927 ZPR1O75312 459 aa27■■□□□ 1.91
DDR1-255ENST00000504927 IL6STP40189 918 aaPredicted RBP27■■□□□ 1.91
DDR1-255ENST00000504927 EIF5P55010 431 aaKnown RBP27■■□□□ 1.91
DDR1-255ENST00000504927 NPM2Q86SE8 214 aaKnown RBP27■■□□□ 1.91
DDR1-255ENST00000504927 CFAP44Q96MT7 982 aa27■■□□□ 1.91
DDR1-255ENST00000504927 C4AP0C0L4 1744 aa26.99■■□□□ 1.91
DDR1-255ENST00000504927 PRAMEF22A3QJZ6 481 aa26.99■■□□□ 1.91
DDR1-255ENST00000504927 CCER2I3L3R5 266 aa26.99■■□□□ 1.91
DDR1-255ENST00000504927 A1BGP04217 495 aa26.99■■□□□ 1.91
DDR1-255ENST00000504927 CCDC27Q2M243 656 aa26.99■■□□□ 1.91
DDR1-255ENST00000504927 GYS1P13807 737 aa26.98■■□□□ 1.91
DDR1-255ENST00000504927 DIEXFQ68CQ4 756 aaKnown RBP26.98■■□□□ 1.91
DDR1-255ENST00000504927 SYT17Q9BSW7 474 aa26.98■■□□□ 1.91
DDR1-255ENST00000504927 LAS1LQ9Y4W2 734 aaKnown RBP26.98■■□□□ 1.91
DDR1-255ENST00000504927 USP42Q9H9J4 1324 aaKnown RBP26.97■■□□□ 1.91
DDR1-255ENST00000504927 NARFQ9UHQ1 456 aa26.97■■□□□ 1.91
DDR1-255ENST00000504927 COL15A1P39059 1388 aa26.97■■□□□ 1.91
DDR1-255ENST00000504927 UTRNP46939 3433 aa26.96■■□□□ 1.91
DDR1-255ENST00000504927 GNAI1P63096 354 aa26.95■■□□□ 1.9
DDR1-255ENST00000504927 IFT57Q9NWB7 429 aa26.95■■□□□ 1.9
DDR1-255ENST00000504927 GOLGB1Q14789 3259 aaKnown RBP26.95■■□□□ 1.9
DDR1-255ENST00000504927 KDM3BQ7LBC6 1761 aa26.94■■□□□ 1.9
DDR1-255ENST00000504927 NGEFQ8N5V2 710 aa26.94■■□□□ 1.9
DDR1-255ENST00000504927 SRP68Q9UHB9 627 aaKnown RBP26.94■■□□□ 1.9
DDR1-255ENST00000504927 ZNF853P0CG23 659 aa26.93■■□□□ 1.9
DDR1-255ENST00000504927 MMP10P09238 476 aa26.92■■□□□ 1.9
DDR1-255ENST00000504927 USPL1Q5W0Q7 1092 aa26.92■■□□□ 1.9
DDR1-255ENST00000504927 WWC1Q8IX03 1113 aa26.92■■□□□ 1.9
DDR1-255ENST00000504927 KLHL34Q8N239 644 aa26.92■■□□□ 1.9
DDR1-255ENST00000504927 ZNF330Q9Y3S2 320 aaPredicted RBP26.92■■□□□ 1.9
DDR1-255ENST00000504927 FKBP8Q14318 412 aa26.9■■□□□ 1.9
DDR1-255ENST00000504927 NBPF26B4DH59 902 aa26.89■■□□□ 1.9
DDR1-255ENST00000504927 NBPF10Q6P3W6 841 aaKnown RBP26.89■■□□□ 1.9
DDR1-255ENST00000504927 NBPF15Q8N660 670 aa26.89■■□□□ 1.9
DDR1-255ENST00000504927 MBIPQ9NS73 344 aa26.89■■□□□ 1.9
DDR1-255ENST00000504927 CD2APQ9Y5K6 639 aa26.89■■□□□ 1.9
DDR1-255ENST00000504927 PARP3Q9Y6F1 533 aa26.89■■□□□ 1.9
DDR1-255ENST00000504927 ERBB4Q15303 1308 aa26.89■■□□□ 1.89
DDR1-255ENST00000504927 NLGN2Q8NFZ4 835 aa26.88■■□□□ 1.89
DDR1-255ENST00000504927 TBC1D2BQ9UPU7 963 aa26.88■■□□□ 1.89
DDR1-255ENST00000504927 HOXB7P09629 217 aa26.87■■□□□ 1.89
DDR1-255ENST00000504927 TM4SF1P30408 202 aa26.87■■□□□ 1.89
DDR1-255ENST00000504927 IL16Q14005 1332 aa26.87■■□□□ 1.89
DDR1-255ENST00000504927 PIP4K2AP48426 406 aaPredicted RBP26.86■■□□□ 1.89
DDR1-255ENST00000504927 DZIP3Q86Y13 1208 aaKnown RBP26.86■■□□□ 1.89
DDR1-255ENST00000504927 WDR63Q8IWG1 891 aa26.86■■□□□ 1.89
DDR1-255ENST00000504927 DCAF8L1A6NGE4 600 aa26.85■■□□□ 1.89
DDR1-255ENST00000504927 EIF2S2P20042 333 aaKnown RBP26.85■■□□□ 1.89
DDR1-255ENST00000504927 BCL2L12Q9HB09 334 aa26.85■■□□□ 1.89
DDR1-255ENST00000504927 SENP3-EIF4A1A0A087X0R7 540 aa26.84■■□□□ 1.89
DDR1-255ENST00000504927 RGL2O15211 777 aa26.84■■□□□ 1.89
DDR1-255ENST00000504927 CLEC4GQ6UXB4 293 aa26.83■■□□□ 1.89
DDR1-255ENST00000504927 SALL2Q9Y467 1007 aaPredicted RBP26.83■■□□□ 1.89
DDR1-255ENST00000504927 CAMTA2O94983 1202 aa26.82■■□□□ 1.88
DDR1-255ENST00000504927 CHMP4AQ9BY43 222 aa26.82■■□□□ 1.88
DDR1-255ENST00000504927 NFIXQ14938 502 aa26.81■■□□□ 1.88
DDR1-255ENST00000504927 KRT24Q2M2I5 525 aa26.81■■□□□ 1.88
DDR1-255ENST00000504927 DUSP27Q5VZP5 1158 aa26.81■■□□□ 1.88
DDR1-255ENST00000504927 ZNF652Q9Y2D9 606 aa26.81■■□□□ 1.88
DDR1-255ENST00000504927 POLRMTO00411 1230 aaKnown RBP26.8■■□□□ 1.88
DDR1-255ENST00000504927 MYL6BP14649 208 aa26.8■■□□□ 1.88
DDR1-255ENST00000504927 MIER1Q8N108 512 aa26.8■■□□□ 1.88
DDR1-255ENST00000504927 LAMB4A4D0S4 1761 aa26.79■■□□□ 1.88
DDR1-255ENST00000504927 DDR1Q08345 913 aa26.79■■□□□ 1.88
DDR1-255ENST00000504927 ERVV-1B6SEH8 477 aa26.78■■□□□ 1.88
DDR1-255ENST00000504927 PDIA6Q15084 440 aa26.78■■□□□ 1.88
DDR1-255ENST00000504927 HDGFL1Q5TGJ6 251 aa26.77■■□□□ 1.88
DDR1-255ENST00000504927 TBC1D9BQ66K14 1250 aa26.77■■□□□ 1.88
DDR1-255ENST00000504927 SETDB2Q96T68 719 aa26.77■■□□□ 1.88
DDR1-255ENST00000504927 TGFB2P61812 414 aa26.76■■□□□ 1.87
DDR1-255ENST00000504927 KIF6Q6ZMV9 814 aa26.76■■□□□ 1.87
DDR1-255ENST00000504927 DDX21Q9NR30 783 aaKnown RBP eCLIP26.76■■□□□ 1.87
DDR1-255ENST00000504927 SERPINB2P05120 415 aa26.75■■□□□ 1.87
DDR1-255ENST00000504927 BICDL1Q6ZP65 573 aa26.75■■□□□ 1.87
DDR1-255ENST00000504927 NECTIN2Q92692 538 aa26.75■■□□□ 1.87
DDR1-255ENST00000504927 DBF4Q9UBU7 674 aaPredicted RBP26.75■■□□□ 1.87
DDR1-255ENST00000504927 LRP10Q7Z4F1 713 aa26.74■■□□□ 1.87
DDR1-255ENST00000504927 C8orf58Q8NAV2 365 aa26.74■■□□□ 1.87
DDR1-255ENST00000504927 KIF13BQ9NQT8 1826 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 270 ms