RNA–Protein interactions for RNA: ENST00000497165.5

ARF1-212, Transcript of ADP ribosylation factor 1, humanhuman

TSL 3

Gene ARF1, Length 675 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-212ENST00000497165 CCDC87Q9NVE4 849 aa20.51■□□□□ 0.87
ARF1-212ENST00000497165 BABAM1Q9NWV8 329 aa20.51■□□□□ 0.87
ARF1-212ENST00000497165 ADRA2BP18089 450 aa20.5■□□□□ 0.87
ARF1-212ENST00000497165 PTGER2P43116 358 aa20.5■□□□□ 0.87
ARF1-212ENST00000497165 SNRPA1P09661 255 aaKnown RBP20.49■□□□□ 0.87
ARF1-212ENST00000497165 ARHGEF1Q92888 912 aaKnown RBP20.49■□□□□ 0.87
ARF1-212ENST00000497165 TSPYL4Q9UJ04 414 aa20.49■□□□□ 0.87
ARF1-212ENST00000497165 EIF4A1P60842 406 aaKnown RBP20.48■□□□□ 0.87
ARF1-212ENST00000497165 SGIP1Q9BQI5 828 aa20.48■□□□□ 0.87
ARF1-212ENST00000497165 CCER2I3L3R5 266 aa20.47■□□□□ 0.87
ARF1-212ENST00000497165 ZBTB1Q9Y2K1 713 aa20.47■□□□□ 0.87
ARF1-212ENST00000497165 USP16Q9Y5T5 823 aa20.47■□□□□ 0.87
ARF1-212ENST00000497165 PRAMEF22A3QJZ6 481 aa20.46■□□□□ 0.87
ARF1-212ENST00000497165 RFC4P35249 363 aa20.46■□□□□ 0.87
ARF1-212ENST00000497165 PPP1R1BQ9UD71 204 aaPredicted RBP20.46■□□□□ 0.87
ARF1-212ENST00000497165 CHL1O00533 1208 aa20.45■□□□□ 0.86
ARF1-212ENST00000497165 CANXP27824 592 aaKnown RBP20.45■□□□□ 0.86
ARF1-212ENST00000497165 POLD1P28340 1107 aa20.45■□□□□ 0.86
ARF1-212ENST00000497165 NCBP3Q53F19 620 aaKnown RBP20.45■□□□□ 0.86
ARF1-212ENST00000497165 LAS1LQ9Y4W2 734 aaKnown RBP20.45■□□□□ 0.86
ARF1-212ENST00000497165 SOS1Q07889 1333 aaPredicted RBP20.45■□□□□ 0.86
ARF1-212ENST00000497165 GIGYF1O75420 1035 aaPredicted RBP20.44■□□□□ 0.86
ARF1-212ENST00000497165 CALD1Q05682 793 aaKnown RBP20.44■□□□□ 0.86
ARF1-212ENST00000497165 CCDC27Q2M243 656 aa20.44■□□□□ 0.86
ARF1-212ENST00000497165 MSL1Q68DK7 614 aa20.44■□□□□ 0.86
ARF1-212ENST00000497165 SENP3-EIF4A1A0A087X0R7 540 aa20.43■□□□□ 0.86
ARF1-212ENST00000497165 A1BGP04217 495 aa20.43■□□□□ 0.86
ARF1-212ENST00000497165 CFAP44Q96MT7 982 aa20.43■□□□□ 0.86
ARF1-212ENST00000497165 EIF5P55010 431 aaKnown RBP20.42■□□□□ 0.86
ARF1-212ENST00000497165 ARXQ96QS3 562 aa20.42■□□□□ 0.86
ARF1-212ENST00000497165 COL15A1P39059 1388 aa20.42■□□□□ 0.86
ARF1-212ENST00000497165 ZNF853P0CG23 659 aa20.41■□□□□ 0.86
ARF1-212ENST00000497165 IL6STP40189 918 aaPredicted RBP20.41■□□□□ 0.86
ARF1-212ENST00000497165 GYS1P13807 737 aa20.4■□□□□ 0.86
ARF1-212ENST00000497165 GNAI1P63096 354 aa20.4■□□□□ 0.86
ARF1-212ENST00000497165 WWC1Q8IX03 1113 aa20.4■□□□□ 0.86
ARF1-212ENST00000497165 NLGN1Q8N2Q7 840 aa20.4■□□□□ 0.86
ARF1-212ENST00000497165 IFT57Q9NWB7 429 aa20.4■□□□□ 0.86
ARF1-212ENST00000497165 USP42Q9H9J4 1324 aaKnown RBP20.39■□□□□ 0.85
ARF1-212ENST00000497165 A0A087WZG4 1122 aa20.39■□□□□ 0.85
ARF1-212ENST00000497165 ZPR1O75312 459 aa20.39■□□□□ 0.85
ARF1-212ENST00000497165 MIER1Q8N108 512 aa20.39■□□□□ 0.85
ARF1-212ENST00000497165 SRP68Q9UHB9 627 aaKnown RBP20.39■□□□□ 0.85
ARF1-212ENST00000497165 NARFQ9UHQ1 456 aa20.39■□□□□ 0.85
ARF1-212ENST00000497165 NPM2Q86SE8 214 aaKnown RBP20.38■□□□□ 0.85
ARF1-212ENST00000497165 MBIPQ9NS73 344 aa20.38■□□□□ 0.85
ARF1-212ENST00000497165 ZNF330Q9Y3S2 320 aaPredicted RBP20.38■□□□□ 0.85
ARF1-212ENST00000497165 SALL2Q9Y467 1007 aaPredicted RBP20.38■□□□□ 0.85
ARF1-212ENST00000497165 BCORQ6W2J9 1755 aa20.37■□□□□ 0.85
ARF1-212ENST00000497165 PIP4K2AP48426 406 aaPredicted RBP20.37■□□□□ 0.85
ARF1-212ENST00000497165 NGEFQ8N5V2 710 aa20.37■□□□□ 0.85
ARF1-212ENST00000497165 NUP98P52948 1817 aa20.37■□□□□ 0.85
ARF1-212ENST00000497165 AFDNP55196 1824 aaKnown RBP20.37■□□□□ 0.85
ARF1-212ENST00000497165 NBPF26B4DH59 902 aa20.36■□□□□ 0.85
ARF1-212ENST00000497165 USPL1Q5W0Q7 1092 aa20.36■□□□□ 0.85
ARF1-212ENST00000497165 NBPF10Q6P3W6 841 aaKnown RBP20.36■□□□□ 0.85
ARF1-212ENST00000497165 NBPF15Q8N660 670 aa20.36■□□□□ 0.85
ARF1-212ENST00000497165 SCN7AQ01118 1682 aa20.35■□□□□ 0.85
ARF1-212ENST00000497165 IL16Q14005 1332 aa20.34■□□□□ 0.85
ARF1-212ENST00000497165 MMP10P09238 476 aa20.34■□□□□ 0.85
ARF1-212ENST00000497165 FKBP8Q14318 412 aa20.34■□□□□ 0.85
ARF1-212ENST00000497165 KRT24Q2M2I5 525 aa20.34■□□□□ 0.85
ARF1-212ENST00000497165 WDR63Q8IWG1 891 aa20.34■□□□□ 0.85
ARF1-212ENST00000497165 FHDC1Q9C0D6 1143 aaPredicted RBP20.34■□□□□ 0.85
ARF1-212ENST00000497165 TBC1D2BQ9UPU7 963 aa20.34■□□□□ 0.85
ARF1-212ENST00000497165 KIF13BQ9NQT8 1826 aa20.34■□□□□ 0.85
ARF1-212ENST00000497165 EIF2S2P20042 333 aaKnown RBP20.33■□□□□ 0.85
ARF1-212ENST00000497165 SYT17Q9BSW7 474 aa20.33■□□□□ 0.85
ARF1-212ENST00000497165 ERBB4Q15303 1308 aa20.32■□□□□ 0.84
ARF1-212ENST00000497165 CACNA1FO60840 1977 aa20.32■□□□□ 0.84
ARF1-212ENST00000497165 HOXB7P09629 217 aa20.32■□□□□ 0.84
ARF1-212ENST00000497165 DZIP3Q86Y13 1208 aaKnown RBP20.32■□□□□ 0.84
ARF1-212ENST00000497165 BCL2L12Q9HB09 334 aa20.32■□□□□ 0.84
ARF1-212ENST00000497165 PARP3Q9Y6F1 533 aa20.31■□□□□ 0.84
ARF1-212ENST00000497165 CAMTA2O94983 1202 aa20.3■□□□□ 0.84
ARF1-212ENST00000497165 MYL6BP14649 208 aa20.3■□□□□ 0.84
ARF1-212ENST00000497165 TM4SF1P30408 202 aa20.3■□□□□ 0.84
ARF1-212ENST00000497165 DUSP27Q5VZP5 1158 aa20.3■□□□□ 0.84
ARF1-212ENST00000497165 KLHL34Q8N239 644 aa20.3■□□□□ 0.84
ARF1-212ENST00000497165 NECTIN2Q92692 538 aa20.29■□□□□ 0.84
ARF1-212ENST00000497165 TSR2Q969E8 191 aaKnown RBP20.29■□□□□ 0.84
ARF1-212ENST00000497165 NRXN2Q9P2S2 1712 aa20.28■□□□□ 0.84
ARF1-212ENST00000497165 PDIA6Q15084 440 aa20.28■□□□□ 0.84
ARF1-212ENST00000497165 CD2APQ9Y5K6 639 aa20.28■□□□□ 0.84
ARF1-212ENST00000497165 NFIXQ14938 502 aa20.27■□□□□ 0.84
ARF1-212ENST00000497165 HDGFL1Q5TGJ6 251 aa20.27■□□□□ 0.84
ARF1-212ENST00000497165 C8orf58Q8NAV2 365 aa20.27■□□□□ 0.84
ARF1-212ENST00000497165 N4BP2Q86UW6 1770 aaPredicted RBP20.26■□□□□ 0.83
ARF1-212ENST00000497165 POLRMTO00411 1230 aaKnown RBP20.26■□□□□ 0.83
ARF1-212ENST00000497165 ELL2O00472 640 aaPredicted RBP20.26■□□□□ 0.83
ARF1-212ENST00000497165 DDR1Q08345 913 aa20.26■□□□□ 0.83
ARF1-212ENST00000497165 CLEC4GQ6UXB4 293 aa20.26■□□□□ 0.83
ARF1-212ENST00000497165 ANXA1P04083 346 aa20.25■□□□□ 0.83
ARF1-212ENST00000497165 PROSER3Q2NL68 480 aa20.25■□□□□ 0.83
ARF1-212ENST00000497165 TBC1D9BQ66K14 1250 aa20.25■□□□□ 0.83
ARF1-212ENST00000497165 LRP10Q7Z4F1 713 aa20.25■□□□□ 0.83
ARF1-212ENST00000497165 DDX21Q9NR30 783 aaKnown RBP eCLIP20.25■□□□□ 0.83
ARF1-212ENST00000497165 ZNF652Q9Y2D9 606 aa20.25■□□□□ 0.83
ARF1-212ENST00000497165 ZNF521Q96K83 1311 aa20.25■□□□□ 0.83
ARF1-212ENST00000497165 RGL2O15211 777 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms