RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 ADRA2BP18089 450 aa16.73■□□□□ 0.27
CLIP2-209ENST00000493166 INTS5Q6P9B9 1019 aaKnown RBP16.73■□□□□ 0.27
CLIP2-209ENST00000493166 CCER2I3L3R5 266 aa16.72■□□□□ 0.27
CLIP2-209ENST00000493166 SNRPA1P09661 255 aaKnown RBP16.72■□□□□ 0.27
CLIP2-209ENST00000493166 TRAPPC3LQ5T215 181 aa16.72■□□□□ 0.27
CLIP2-209ENST00000493166 BABAM1Q9NWV8 329 aa16.72■□□□□ 0.27
CLIP2-209ENST00000493166 LAS1LQ9Y4W2 734 aaKnown RBP16.72■□□□□ 0.27
CLIP2-209ENST00000493166 SENP3-EIF4A1A0A087X0R7 540 aa16.71■□□□□ 0.27
CLIP2-209ENST00000493166 CALD1Q05682 793 aaKnown RBP16.71■□□□□ 0.27
CLIP2-209ENST00000493166 PPP1R1BQ9UD71 204 aaPredicted RBP16.71■□□□□ 0.27
CLIP2-209ENST00000493166 ZBTB1Q9Y2K1 713 aa16.71■□□□□ 0.27
CLIP2-209ENST00000493166 SOS1Q07889 1333 aaPredicted RBP16.7■□□□□ 0.26
CLIP2-209ENST00000493166 PRAMEF22A3QJZ6 481 aa16.7■□□□□ 0.26
CLIP2-209ENST00000493166 RFC4P35249 363 aa16.7■□□□□ 0.26
CLIP2-209ENST00000493166 PTGER2P43116 358 aa16.7■□□□□ 0.26
CLIP2-209ENST00000493166 EIF4A1P60842 406 aaKnown RBP16.7■□□□□ 0.26
CLIP2-209ENST00000493166 MSL1Q68DK7 614 aa16.7■□□□□ 0.26
CLIP2-209ENST00000493166 SCN7AQ01118 1682 aa16.69■□□□□ 0.26
CLIP2-209ENST00000493166 COL15A1P39059 1388 aa16.69■□□□□ 0.26
CLIP2-209ENST00000493166 CANXP27824 592 aaKnown RBP16.69■□□□□ 0.26
CLIP2-209ENST00000493166 POLD1P28340 1107 aa16.69■□□□□ 0.26
CLIP2-209ENST00000493166 ARHGEF1Q92888 912 aaKnown RBP16.69■□□□□ 0.26
CLIP2-209ENST00000493166 BCORQ6W2J9 1755 aa16.69■□□□□ 0.26
CLIP2-209ENST00000493166 CHL1O00533 1208 aa16.68■□□□□ 0.26
CLIP2-209ENST00000493166 SGIP1Q9BQI5 828 aa16.68■□□□□ 0.26
CLIP2-209ENST00000493166 USP16Q9Y5T5 823 aa16.68■□□□□ 0.26
CLIP2-209ENST00000493166 GIGYF1O75420 1035 aaPredicted RBP16.67■□□□□ 0.26
CLIP2-209ENST00000493166 A1BGP04217 495 aa16.67■□□□□ 0.26
CLIP2-209ENST00000493166 CCDC27Q2M243 656 aa16.67■□□□□ 0.26
CLIP2-209ENST00000493166 CFAP44Q96MT7 982 aa16.67■□□□□ 0.26
CLIP2-209ENST00000493166 NCBP3Q53F19 620 aaKnown RBP16.66■□□□□ 0.26
CLIP2-209ENST00000493166 MIER1Q8N108 512 aa16.66■□□□□ 0.26
CLIP2-209ENST00000493166 IFT57Q9NWB7 429 aa16.66■□□□□ 0.26
CLIP2-209ENST00000493166 ZNF330Q9Y3S2 320 aaPredicted RBP16.66■□□□□ 0.26
CLIP2-209ENST00000493166 SALL2Q9Y467 1007 aaPredicted RBP16.66■□□□□ 0.26
CLIP2-209ENST00000493166 USP42Q9H9J4 1324 aaKnown RBP16.66■□□□□ 0.26
CLIP2-209ENST00000493166 GNAI1P63096 354 aa16.65■□□□□ 0.26
CLIP2-209ENST00000493166 NPM2Q86SE8 214 aaKnown RBP16.65■□□□□ 0.26
CLIP2-209ENST00000493166 WWC1Q8IX03 1113 aa16.65■□□□□ 0.26
CLIP2-209ENST00000493166 ARXQ96QS3 562 aa16.65■□□□□ 0.26
CLIP2-209ENST00000493166 A0A087WZG4 1122 aa16.64■□□□□ 0.25
CLIP2-209ENST00000493166 ZPR1O75312 459 aa16.64■□□□□ 0.25
CLIP2-209ENST00000493166 IL6STP40189 918 aaPredicted RBP16.64■□□□□ 0.25
CLIP2-209ENST00000493166 PIP4K2AP48426 406 aaPredicted RBP16.64■□□□□ 0.25
CLIP2-209ENST00000493166 EIF5P55010 431 aaKnown RBP16.64■□□□□ 0.25
CLIP2-209ENST00000493166 MBIPQ9NS73 344 aa16.64■□□□□ 0.25
CLIP2-209ENST00000493166 SRP68Q9UHB9 627 aaKnown RBP16.64■□□□□ 0.25
CLIP2-209ENST00000493166 ZNF853P0CG23 659 aa16.63■□□□□ 0.25
CLIP2-209ENST00000493166 GYS1P13807 737 aa16.63■□□□□ 0.25
CLIP2-209ENST00000493166 AFDNP55196 1824 aaKnown RBP16.63■□□□□ 0.25
CLIP2-209ENST00000493166 NUP98P52948 1817 aa16.62■□□□□ 0.25
CLIP2-209ENST00000493166 USPL1Q5W0Q7 1092 aa16.62■□□□□ 0.25
CLIP2-209ENST00000493166 NLGN1Q8N2Q7 840 aa16.62■□□□□ 0.25
CLIP2-209ENST00000493166 NGEFQ8N5V2 710 aa16.62■□□□□ 0.25
CLIP2-209ENST00000493166 NARFQ9UHQ1 456 aa16.62■□□□□ 0.25
CLIP2-209ENST00000493166 NBPF26B4DH59 902 aa16.61■□□□□ 0.25
CLIP2-209ENST00000493166 MMP10P09238 476 aa16.61■□□□□ 0.25
CLIP2-209ENST00000493166 KRT24Q2M2I5 525 aa16.61■□□□□ 0.25
CLIP2-209ENST00000493166 NBPF10Q6P3W6 841 aaKnown RBP16.61■□□□□ 0.25
CLIP2-209ENST00000493166 NBPF15Q8N660 670 aa16.61■□□□□ 0.25
CLIP2-209ENST00000493166 IL16Q14005 1332 aa16.61■□□□□ 0.25
CLIP2-209ENST00000493166 KIF13BQ9NQT8 1826 aa16.61■□□□□ 0.25
CLIP2-209ENST00000493166 EIF2S2P20042 333 aaKnown RBP16.6■□□□□ 0.25
CLIP2-209ENST00000493166 FKBP8Q14318 412 aa16.6■□□□□ 0.25
CLIP2-209ENST00000493166 KLHL34Q8N239 644 aa16.6■□□□□ 0.25
CLIP2-209ENST00000493166 FHDC1Q9C0D6 1143 aaPredicted RBP16.6■□□□□ 0.25
CLIP2-209ENST00000493166 DZIP3Q86Y13 1208 aaKnown RBP16.59■□□□□ 0.25
CLIP2-209ENST00000493166 WDR63Q8IWG1 891 aa16.59■□□□□ 0.25
CLIP2-209ENST00000493166 TBC1D2BQ9UPU7 963 aa16.59■□□□□ 0.25
CLIP2-209ENST00000493166 ERBB4Q15303 1308 aa16.59■□□□□ 0.25
CLIP2-209ENST00000493166 HOXB7P09629 217 aa16.58■□□□□ 0.24
CLIP2-209ENST00000493166 MYL6BP14649 208 aa16.58■□□□□ 0.24
CLIP2-209ENST00000493166 NECTIN2Q92692 538 aa16.58■□□□□ 0.24
CLIP2-209ENST00000493166 TSR2Q969E8 191 aaKnown RBP16.58■□□□□ 0.24
CLIP2-209ENST00000493166 CACNA1FO60840 1977 aa16.57■□□□□ 0.24
CLIP2-209ENST00000493166 ANKRD36CQ5JPF3 1778 aa16.57■□□□□ 0.24
CLIP2-209ENST00000493166 NRXN2Q9P2S2 1712 aa16.57■□□□□ 0.24
CLIP2-209ENST00000493166 DUSP27Q5VZP5 1158 aa16.57■□□□□ 0.24
CLIP2-209ENST00000493166 PARP3Q9Y6F1 533 aa16.57■□□□□ 0.24
CLIP2-209ENST00000493166 CAMTA2O94983 1202 aa16.56■□□□□ 0.24
CLIP2-209ENST00000493166 HDGFL1Q5TGJ6 251 aa16.56■□□□□ 0.24
CLIP2-209ENST00000493166 BCL2L12Q9HB09 334 aa16.56■□□□□ 0.24
CLIP2-209ENST00000493166 N4BP2Q86UW6 1770 aaPredicted RBP16.56■□□□□ 0.24
CLIP2-209ENST00000493166 SYT17Q9BSW7 474 aa16.55■□□□□ 0.24
CLIP2-209ENST00000493166 GOLGB1Q14789 3259 aaKnown RBP16.55■□□□□ 0.24
CLIP2-209ENST00000493166 KIAA1551Q9HCM1 1747 aa16.54■□□□□ 0.24
CLIP2-209ENST00000493166 FANCIQ9NVI1 1328 aa16.54■□□□□ 0.24
CLIP2-209ENST00000493166 ELL2O00472 640 aaPredicted RBP16.54■□□□□ 0.24
CLIP2-209ENST00000493166 DDR1Q08345 913 aa16.54■□□□□ 0.24
CLIP2-209ENST00000493166 NFIXQ14938 502 aa16.54■□□□□ 0.24
CLIP2-209ENST00000493166 KIF6Q6ZMV9 814 aa16.54■□□□□ 0.24
CLIP2-209ENST00000493166 C8orf58Q8NAV2 365 aa16.54■□□□□ 0.24
CLIP2-209ENST00000493166 ZNF652Q9Y2D9 606 aa16.54■□□□□ 0.24
CLIP2-209ENST00000493166 ZNF521Q96K83 1311 aa16.53■□□□□ 0.24
CLIP2-209ENST00000493166 ANXA1P04083 346 aa16.53■□□□□ 0.24
CLIP2-209ENST00000493166 TM4SF1P30408 202 aa16.53■□□□□ 0.24
CLIP2-209ENST00000493166 PROSER3Q2NL68 480 aa16.53■□□□□ 0.24
CLIP2-209ENST00000493166 BICDL1Q6ZP65 573 aa16.53■□□□□ 0.24
CLIP2-209ENST00000493166 DDX21Q9NR30 783 aaKnown RBP eCLIP16.53■□□□□ 0.24
CLIP2-209ENST00000493166 CHPF2Q9P2E5 772 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms