RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 SLC27A3Q5K4L6 730 aa8.86□□□□□ -0.99
CCL20-204ENST00000489160 LYSMD3Q7Z3D4 306 aa8.86□□□□□ -0.99
CCL20-204ENST00000489160 STAG2Q8N3U4 1231 aa8.86□□□□□ -0.99
CCL20-204ENST00000489160 RNF217Q8TC41 542 aa8.86□□□□□ -0.99
CCL20-204ENST00000489160 COL26A1Q96A83 441 aa8.86□□□□□ -0.99
CCL20-204ENST00000489160 GRIP2Q9C0E4 1043 aa8.86□□□□□ -0.99
CCL20-204ENST00000489160 DNMT3LQ9UJW3 386 aa8.86□□□□□ -0.99
CCL20-204ENST00000489160 IQSEC3Q9UPP2 1182 aaPredicted RBP8.86□□□□□ -0.99
CCL20-204ENST00000489160 GTF2E1P29083 439 aaPredicted RBP8.85□□□□□ -0.99
CCL20-204ENST00000489160 PSMA6P60900 246 aaKnown RBP8.85□□□□□ -0.99
CCL20-204ENST00000489160 VTI1AQ96AJ9 217 aa8.85□□□□□ -0.99
CCL20-204ENST00000489160 ZSCAN10Q96SZ4 725 aaPredicted RBP8.85□□□□□ -0.99
CCL20-204ENST00000489160 CHMP3Q9Y3E7 222 aa8.85□□□□□ -0.99
CCL20-204ENST00000489160 SCNN1AP37088 669 aa8.84□□□□□ -0.99
CCL20-204ENST00000489160 TBCELQ5QJ74 424 aa8.84□□□□□ -0.99
CCL20-204ENST00000489160 PPARGC1BQ86YN6 1023 aaKnown RBP8.84□□□□□ -0.99
CCL20-204ENST00000489160 CHMP7Q8WUX9 453 aaPredicted RBP8.84□□□□□ -0.99
CCL20-204ENST00000489160 MKNK1Q9BUB5 465 aa8.84□□□□□ -0.99
CCL20-204ENST00000489160 SPATA31C2B4DYI2 1134 aa8.83□□□□□ -1
CCL20-204ENST00000489160 PRICKLE2Q7Z3G6 844 aa8.83□□□□□ -1
CCL20-204ENST00000489160 C2orf49Q9BVC5 232 aaPredicted RBP8.83□□□□□ -1
CCL20-204ENST00000489160 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.83□□□□□ -1
CCL20-204ENST00000489160 USP3Q9Y6I4 520 aa8.83□□□□□ -1
CCL20-204ENST00000489160 SOBPA7XYQ1 873 aa8.82□□□□□ -1
CCL20-204ENST00000489160 SERPINB4P48594 390 aa8.82□□□□□ -1
CCL20-204ENST00000489160 TEAD4Q15561 434 aa8.82□□□□□ -1
CCL20-204ENST00000489160 TMCO4Q5TGY1 634 aa8.82□□□□□ -1
CCL20-204ENST00000489160 TMEM214Q6NUQ4 689 aaKnown RBP8.82□□□□□ -1
CCL20-204ENST00000489160 NIFKQ9BYG3 293 aaKnown RBP8.82□□□□□ -1
CCL20-204ENST00000489160 SERTM1A2A2V5 107 aa8.81□□□□□ -1
CCL20-204ENST00000489160 WDR44Q5JSH3 913 aa8.81□□□□□ -1
CCL20-204ENST00000489160 GNASQ5JWF2 1037 aa8.81□□□□□ -1
CCL20-204ENST00000489160 POTEAQ6S8J7 498 aa8.81□□□□□ -1
CCL20-204ENST00000489160 SND1Q7KZF4 910 aaKnown RBP eCLIP8.81□□□□□ -11e-7■■■□□ 16.1
CCL20-204ENST00000489160 ZNF295-AS1Q8N0V1 137 aa8.81□□□□□ -1
CCL20-204ENST00000489160 RHBDD1Q8TEB9 315 aa8.81□□□□□ -1
CCL20-204ENST00000489160 CABP1Q9NZU7 370 aa8.81□□□□□ -1
CCL20-204ENST00000489160 SEPT3Q9UH03 358 aa8.81□□□□□ -1
CCL20-204ENST00000489160 EGFL7Q9UHF1 273 aa8.81□□□□□ -1
CCL20-204ENST00000489160 CCDC9Q9Y3X0 531 aaKnown RBP8.81□□□□□ -1
CCL20-204ENST00000489160 HIRAP54198 1017 aaPredicted RBP8.8□□□□□ -1
CCL20-204ENST00000489160 CAPN12Q6ZSI9 719 aa8.8□□□□□ -1
CCL20-204ENST00000489160 GTF3C2Q8WUA4 911 aaPredicted RBP8.8□□□□□ -1
CCL20-204ENST00000489160 SOWAHDA6NJG2 315 aa8.79□□□□□ -1
CCL20-204ENST00000489160 EML1O00423 815 aa8.79□□□□□ -1
CCL20-204ENST00000489160 ABL1P00519 1130 aa8.79□□□□□ -1
CCL20-204ENST00000489160 NOS2P35228 1153 aa8.79□□□□□ -1
CCL20-204ENST00000489160 POU4F2Q12837 409 aa8.79□□□□□ -1
CCL20-204ENST00000489160 ZDHHC1Q8WTX9 485 aa8.79□□□□□ -1
CCL20-204ENST00000489160 ZNF232Q9UNY5 417 aa8.79□□□□□ -1
CCL20-204ENST00000489160 PTSQ03393 145 aa8.78□□□□□ -1
CCL20-204ENST00000489160 NAA30Q147X3 362 aaPredicted RBP8.78□□□□□ -1
CCL20-204ENST00000489160 NBPF10Q6P3W6 841 aaKnown RBP8.78□□□□□ -1
CCL20-204ENST00000489160 NPAS3Q8IXF0 933 aa8.78□□□□□ -1
CCL20-204ENST00000489160 L3MBTL2Q969R5 705 aa8.78□□□□□ -1
CCL20-204ENST00000489160 RHOQP17081 205 aa8.77□□□□□ -1.01
CCL20-204ENST00000489160 SF3B2Q13435 895 aaKnown RBP8.77□□□□□ -1.01
CCL20-204ENST00000489160 C16orf46Q6P387 395 aa8.77□□□□□ -1.01
CCL20-204ENST00000489160 NXF1Q9UBU9 619 aaKnown RBP8.77□□□□□ -1.01
CCL20-204ENST00000489160 SLC35F4A4IF30 521 aa8.76□□□□□ -1.01
CCL20-204ENST00000489160 ICMTO60725 284 aa8.76□□□□□ -1.01
CCL20-204ENST00000489160 ZNF211Q13398 564 aaPredicted RBP8.76□□□□□ -1.01
CCL20-204ENST00000489160 C4orf17Q53FE4 359 aa8.76□□□□□ -1.01
CCL20-204ENST00000489160 HELQQ8TDG4 1101 aa8.76□□□□□ -1.01
CCL20-204ENST00000489160 PARP3Q9Y6F1 533 aa8.76□□□□□ -1.01
CCL20-204ENST00000489160 DNMT3AQ9Y6K1 912 aaPredicted RBP8.76□□□□□ -1.01
CCL20-204ENST00000489160 H3BRB1 525 aa8.75□□□□□ -1.01
CCL20-204ENST00000489160 PLA2G4AP47712 749 aa8.75□□□□□ -1.01
CCL20-204ENST00000489160 FKBP4Q02790 459 aaKnown RBP eCLIP8.75□□□□□ -1.01
CCL20-204ENST00000489160 SH3PXD2AQ5TCZ1 1133 aa8.75□□□□□ -1.01
CCL20-204ENST00000489160 MYO19Q96H55 970 aa8.75□□□□□ -1.01
CCL20-204ENST00000489160 TUT1Q9H6E5 874 aaKnown RBP8.75□□□□□ -1.01
CCL20-204ENST00000489160 QTRT2Q9H974 415 aaKnown RBP8.75□□□□□ -1.01
CCL20-204ENST00000489160 TIMMDC1Q9NPL8 285 aa8.75□□□□□ -1.01
CCL20-204ENST00000489160 DYRK1BQ9Y463 629 aa8.75□□□□□ -1.01
CCL20-204ENST00000489160 SENP3-EIF4A1A0A087X0R7 540 aa8.74□□□□□ -1.01
CCL20-204ENST00000489160 CCDC27Q2M243 656 aa8.74□□□□□ -1.01
CCL20-204ENST00000489160 C1orf53Q5VUE5 145 aa8.74□□□□□ -1.01
CCL20-204ENST00000489160 GLYCTKQ8IVS8 523 aa8.74□□□□□ -1.01
CCL20-204ENST00000489160 ALDH16A1Q8IZ83 802 aa8.74□□□□□ -1.01
CCL20-204ENST00000489160 NGLY1Q96IV0 654 aa8.74□□□□□ -1.01
CCL20-204ENST00000489160 SAP130Q9H0E3 1048 aa8.74□□□□□ -1.01
CCL20-204ENST00000489160 ANO2Q9NQ90 1003 aa8.74□□□□□ -1.01
CCL20-204ENST00000489160 HCN4Q9Y3Q4 1203 aa8.74□□□□□ -1.01
CCL20-204ENST00000489160 PHKA2P46019 1235 aa8.73□□□□□ -1.01
CCL20-204ENST00000489160 MFAP1P55081 439 aaKnown RBP8.73□□□□□ -1.01
CCL20-204ENST00000489160 RTN1Q16799 776 aa8.73□□□□□ -1.01
CCL20-204ENST00000489160 NBPF1Q3BBV0 1214 aa8.73□□□□□ -1.01
CCL20-204ENST00000489160 COX20Q5RI15 118 aa8.73□□□□□ -1.01
CCL20-204ENST00000489160 CCDC155Q8N6L0 562 aa8.73□□□□□ -1.01
CCL20-204ENST00000489160 PHACTR1Q9C0D0 580 aa8.73□□□□□ -1.01
CCL20-204ENST00000489160 A0A1B0GTH6 734 aa8.72□□□□□ -1.01
CCL20-204ENST00000489160 TERTO14746 1132 aaKnown RBP8.72□□□□□ -1.01
CCL20-204ENST00000489160 PPFIA3O75145 1194 aa8.72□□□□□ -1.01
CCL20-204ENST00000489160 MTMR3Q13615 1198 aa8.72□□□□□ -1.01
CCL20-204ENST00000489160 SLC16A10Q8TF71 515 aa8.72□□□□□ -1.01
CCL20-204ENST00000489160 ZDHHC3Q9NYG2 299 aa8.72□□□□□ -1.01
CCL20-204ENST00000489160 BIN2Q9UBW5 565 aaPredicted RBP8.72□□□□□ -1.01
CCL20-204ENST00000489160 FAM13AO94988 1023 aa8.71□□□□□ -1.02
CCL20-204ENST00000489160 NPR3P17342 541 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms