RNA–Protein interactions for RNA: ENST00000488024.1

RASSF1-208, Transcript of Ras association domain family member 1, human

TSL 2

Gene RASSF1, Length 1,385 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RASSF1-208	ENST00000488024	STARD3NL	O95772	234 aa		32.37	■■■□□ 2.77
RASSF1-208	ENST00000488024	ADRA2B	P18089	450 aa		32.37	■■■□□ 2.77
RASSF1-208	ENST00000488024	PTGER2	P43116	358 aa		32.37	■■■□□ 2.77
RASSF1-208	ENST00000488024	SGIP1	Q9BQI5	828 aa		32.37	■■■□□ 2.77
RASSF1-208	ENST00000488024	LAMB4	A4D0S4	1761 aa		32.37	■■■□□ 2.77
RASSF1-208	ENST00000488024	SNRPA1	P09661	255 aa	Known RBP	32.36	■■■□□ 2.77
RASSF1-208	ENST00000488024	EIF4A1	P60842	406 aa	Known RBP	32.36	■■■□□ 2.77
RASSF1-208	ENST00000488024	TSPYL4	Q9UJ04	414 aa		32.36	■■■□□ 2.77
RASSF1-208	ENST00000488024	PRAMEF22	A3QJZ6	481 aa		32.35	■■■□□ 2.77
RASSF1-208	ENST00000488024	NCBP3	Q53F19	620 aa	Known RBP	32.35	■■■□□ 2.77
RASSF1-208	ENST00000488024	TRAPPC3L	Q5T215	181 aa		32.35	■■■□□ 2.77
RASSF1-208	ENST00000488024	ZBTB1	Q9Y2K1	713 aa		32.35	■■■□□ 2.77
RASSF1-208	ENST00000488024	CHL1	O00533	1208 aa		32.33	■■■□□ 2.77
RASSF1-208	ENST00000488024	CCDC27	Q2M243	656 aa		32.33	■■■□□ 2.77
RASSF1-208	ENST00000488024	ARHGEF1	Q92888	912 aa	Known RBP	32.33	■■■□□ 2.77
RASSF1-208	ENST00000488024	USP16	Q9Y5T5	823 aa		32.33	■■■□□ 2.77
RASSF1-208	ENST00000488024	SOS1	Q07889	1333 aa	Predicted RBP	32.33	■■■□□ 2.77
RASSF1-208	ENST00000488024	GIGYF1	O75420	1035 aa	Predicted RBP	32.31	■■■□□ 2.76
RASSF1-208	ENST00000488024	SENP3-EIF4A1	A0A087X0R7	540 aa		32.3	■■■□□ 2.76
RASSF1-208	ENST00000488024	CFAP44	Q96MT7	982 aa		32.3	■■■□□ 2.76
RASSF1-208	ENST00000488024	ZNF853	P0CG23	659 aa		32.29	■■■□□ 2.76
RASSF1-208	ENST00000488024	CALD1	Q05682	793 aa	Known RBP	32.28	■■■□□ 2.76
RASSF1-208	ENST00000488024	MIER1	Q8N108	512 aa		32.28	■■■□□ 2.76
RASSF1-208	ENST00000488024	COL15A1	P39059	1388 aa		32.27	■■■□□ 2.76
RASSF1-208	ENST00000488024	A1BG	P04217	495 aa		32.27	■■■□□ 2.76
RASSF1-208	ENST00000488024	CANX	P27824	592 aa	Known RBP	32.27	■■■□□ 2.76
RASSF1-208	ENST00000488024	RFC4	P35249	363 aa		32.27	■■■□□ 2.76
RASSF1-208	ENST00000488024	WWC1	Q8IX03	1113 aa		32.27	■■■□□ 2.76
RASSF1-208	ENST00000488024	LAS1L	Q9Y4W2	734 aa	Known RBP	32.27	■■■□□ 2.76
RASSF1-208	ENST00000488024	EIF5	P55010	431 aa	Known RBP	32.26	■■■□□ 2.75
RASSF1-208	ENST00000488024	MSL1	Q68DK7	614 aa		32.26	■■■□□ 2.75
RASSF1-208	ENST00000488024	IFT57	Q9NWB7	429 aa		32.25	■■■□□ 2.75
RASSF1-208	ENST00000488024	USP42	Q9H9J4	1324 aa	Known RBP	32.24	■■■□□ 2.75
RASSF1-208	ENST00000488024	IL6ST	P40189	918 aa	Predicted RBP	32.23	■■■□□ 2.75
RASSF1-208	ENST00000488024	POLD1	P28340	1107 aa		32.22	■■■□□ 2.75
RASSF1-208	ENST00000488024	GNAI1	P63096	354 aa		32.22	■■■□□ 2.75
RASSF1-208	ENST00000488024	MBIP	Q9NS73	344 aa		32.22	■■■□□ 2.75
RASSF1-208	ENST00000488024	GYS1	P13807	737 aa		32.21	■■■□□ 2.75
RASSF1-208	ENST00000488024	PPP1R1B	Q9UD71	204 aa	Predicted RBP	32.21	■■■□□ 2.75
RASSF1-208	ENST00000488024	NGEF	Q8N5V2	710 aa		32.2	■■■□□ 2.75
RASSF1-208	ENST00000488024	ARX	Q96QS3	562 aa		32.2	■■■□□ 2.75
RASSF1-208	ENST00000488024	SRP68	Q9UHB9	627 aa	Known RBP	32.2	■■■□□ 2.75
RASSF1-208	ENST00000488024	NBPF26	B4DH59	902 aa		32.19	■■■□□ 2.74
RASSF1-208	ENST00000488024	NBPF10	Q6P3W6	841 aa	Known RBP	32.19	■■■□□ 2.74
RASSF1-208	ENST00000488024	NBPF15	Q8N660	670 aa		32.19	■■■□□ 2.74
RASSF1-208	ENST00000488024	NARF	Q9UHQ1	456 aa		32.19	■■■□□ 2.74
RASSF1-208	ENST00000488024	SCN7A	Q01118	1682 aa		32.18	■■■□□ 2.74
RASSF1-208	ENST00000488024	PIP4K2A	P48426	406 aa	Predicted RBP	32.18	■■■□□ 2.74
RASSF1-208	ENST00000488024	KRT24	Q2M2I5	525 aa		32.18	■■■□□ 2.74
RASSF1-208	ENST00000488024	NLGN1	Q8N2Q7	840 aa		32.18	■■■□□ 2.74
RASSF1-208	ENST00000488024	SALL2	Q9Y467	1007 aa	Predicted RBP	32.18	■■■□□ 2.74
RASSF1-208	ENST00000488024	IL16	Q14005	1332 aa		32.18	■■■□□ 2.74
RASSF1-208	ENST00000488024		A0A087WZG4	1122 aa		32.16	■■■□□ 2.74
RASSF1-208	ENST00000488024	BCOR	Q6W2J9	1755 aa		32.15	■■■□□ 2.74
RASSF1-208	ENST00000488024	ZPR1	O75312	459 aa		32.15	■■■□□ 2.74
RASSF1-208	ENST00000488024	USPL1	Q5W0Q7	1092 aa		32.15	■■■□□ 2.74
RASSF1-208	ENST00000488024	WDR63	Q8IWG1	891 aa		32.14	■■■□□ 2.74
RASSF1-208	ENST00000488024	ZNF330	Q9Y3S2	320 aa	Predicted RBP	32.14	■■■□□ 2.74
RASSF1-208	ENST00000488024	ERBB4	Q15303	1308 aa		32.13	■■■□□ 2.73
RASSF1-208	ENST00000488024	FKBP8	Q14318	412 aa		32.13	■■■□□ 2.73
RASSF1-208	ENST00000488024	HOXB7	P09629	217 aa		32.12	■■■□□ 2.73
RASSF1-208	ENST00000488024	BCL2L12	Q9HB09	334 aa		32.12	■■■□□ 2.73
RASSF1-208	ENST00000488024	MMP10	P09238	476 aa		32.1	■■■□□ 2.73
RASSF1-208	ENST00000488024	NPM2	Q86SE8	214 aa	Known RBP	32.1	■■■□□ 2.73
RASSF1-208	ENST00000488024	FHDC1	Q9C0D6	1143 aa	Predicted RBP	32.1	■■■□□ 2.73
RASSF1-208	ENST00000488024	TBC1D2B	Q9UPU7	963 aa		32.1	■■■□□ 2.73
RASSF1-208	ENST00000488024	ZNF521	Q96K83	1311 aa		32.1	■■■□□ 2.73
RASSF1-208	ENST00000488024	EIF2S2	P20042	333 aa	Known RBP	32.09	■■■□□ 2.73
RASSF1-208	ENST00000488024	DZIP3	Q86Y13	1208 aa	Known RBP	32.08	■■■□□ 2.73
RASSF1-208	ENST00000488024	TSR2	Q969E8	191 aa	Known RBP	32.08	■■■□□ 2.73
RASSF1-208	ENST00000488024	CAMTA2	O94983	1202 aa		32.07	■■■□□ 2.73
RASSF1-208	ENST00000488024	PDIA6	Q15084	440 aa		32.07	■■■□□ 2.73
RASSF1-208	ENST00000488024	DUSP27	Q5VZP5	1158 aa		32.07	■■■□□ 2.73
RASSF1-208	ENST00000488024	TM4SF1	P30408	202 aa		32.07	■■■□□ 2.72
RASSF1-208	ENST00000488024	SYT17	Q9BSW7	474 aa		32.07	■■■□□ 2.72
RASSF1-208	ENST00000488024	LRP10	Q7Z4F1	713 aa		32.06	■■■□□ 2.72
RASSF1-208	ENST00000488024	C8orf58	Q8NAV2	365 aa		32.05	■■■□□ 2.72
RASSF1-208	ENST00000488024	MYL6B	P14649	208 aa		32.04	■■■□□ 2.72
RASSF1-208	ENST00000488024	KIF13B	Q9NQT8	1826 aa		32.03	■■■□□ 2.72
RASSF1-208	ENST00000488024	DDR1	Q08345	913 aa		32.03	■■■□□ 2.72
RASSF1-208	ENST00000488024	HDGFL1	Q5TGJ6	251 aa		32.03	■■■□□ 2.72
RASSF1-208	ENST00000488024	NECTIN2	Q92692	538 aa		32.03	■■■□□ 2.72
RASSF1-208	ENST00000488024	SPINK5	Q9NQ38	1064 aa	Predicted RBP	32.03	■■■□□ 2.72
RASSF1-208	ENST00000488024	FANCI	Q9NVI1	1328 aa		32.02	■■■□□ 2.72
RASSF1-208	ENST00000488024	NFIX	Q14938	502 aa		32.02	■■■□□ 2.72
RASSF1-208	ENST00000488024	PROSER3	Q2NL68	480 aa		32.02	■■■□□ 2.72
RASSF1-208	ENST00000488024	PARP3	Q9Y6F1	533 aa		32.02	■■■□□ 2.72
RASSF1-208	ENST00000488024	AFDN	P55196	1824 aa	Known RBP	32.02	■■■□□ 2.72
RASSF1-208	ENST00000488024	NRXN2	Q9P2S2	1712 aa		32.01	■■■□□ 2.72
RASSF1-208	ENST00000488024	RGL2	O15211	777 aa		32.01	■■■□□ 2.71
RASSF1-208	ENST00000488024	POLRMT	O00411	1230 aa	Known RBP	32	■■■□□ 2.71
RASSF1-208	ENST00000488024	ELL2	O00472	640 aa	Predicted RBP	32	■■■□□ 2.71
RASSF1-208	ENST00000488024	TSPYL6	Q8N831	410 aa		32	■■■□□ 2.71
RASSF1-208	ENST00000488024	DDX21	Q9NR30	783 aa	Known RBP eCLIP	32	■■■□□ 2.71
RASSF1-208	ENST00000488024	ANXA1	P04083	346 aa		31.99	■■■□□ 2.71
RASSF1-208	ENST00000488024	CD2AP	Q9Y5K6	639 aa		31.99	■■■□□ 2.71
RASSF1-208	ENST00000488024	NUP98	P52948	1817 aa		31.99	■■■□□ 2.71
RASSF1-208	ENST00000488024	TBC1D9B	Q66K14	1250 aa		31.98	■■■□□ 2.71
RASSF1-208	ENST00000488024	CLEC4G	Q6UXB4	293 aa		31.98	■■■□□ 2.71
RASSF1-208	ENST00000488024	TTLL7	Q6ZT98	887 aa		31.98	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms