RNA–Protein interactions for RNA: ENST00000485946.1

PCCA-209, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 2

Gene PCCA, Length 1,789 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-209ENST00000485946 CASC1Q6TDU7 716 aa7.72□□□□□ -1.17
PCCA-209ENST00000485946 FBXO33Q7Z6M2 555 aa7.72□□□□□ -1.17
PCCA-209ENST00000485946 NBPF11Q86T75 865 aa7.72□□□□□ -1.17
PCCA-209ENST00000485946 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.72□□□□□ -1.17
PCCA-209ENST00000485946 PRKAG2Q9UGJ0 569 aa7.72□□□□□ -1.17
PCCA-209ENST00000485946 STK10O94804 968 aaKnown RBP7.71□□□□□ -1.17
PCCA-209ENST00000485946 FECHP22830 423 aa7.71□□□□□ -1.17
PCCA-209ENST00000485946 XPCQ01831 940 aaPredicted RBP7.71□□□□□ -1.17
PCCA-209ENST00000485946 RAD51AP2Q09MP3 1159 aa7.71□□□□□ -1.17
PCCA-209ENST00000485946 STAG1Q8WVM7 1258 aa7.71□□□□□ -1.17
PCCA-209ENST00000485946 PCDH12Q9NPG4 1184 aa7.71□□□□□ -1.17
PCCA-209ENST00000485946 SOWAHDA6NJG2 315 aa7.71□□□□□ -1.18
PCCA-209ENST00000485946 COPB2P35606 906 aa7.71□□□□□ -1.18
PCCA-209ENST00000485946 JAZF1Q86VZ6 243 aa7.71□□□□□ -1.18
PCCA-209ENST00000485946 TINF2Q9BSI4 451 aa7.71□□□□□ -1.18
PCCA-209ENST00000485946 IRX2Q9BZI1 471 aaPredicted RBP7.71□□□□□ -1.18
PCCA-209ENST00000485946 TMX4Q9H1E5 349 aaPredicted RBP7.71□□□□□ -1.18
PCCA-209ENST00000485946 IQSEC3Q9UPP2 1182 aaPredicted RBP7.71□□□□□ -1.18
PCCA-209ENST00000485946 TBC1D2BQ9UPU7 963 aa7.71□□□□□ -1.18
PCCA-209ENST00000485946 NWD1Q149M9 1564 aa7.7□□□□□ -1.18
PCCA-209ENST00000485946 STRCP1A6NGW2 1772 aa7.7□□□□□ -1.18
PCCA-209ENST00000485946 XIRP1Q702N8 1843 aaKnown RBP7.7□□□□□ -1.18
PCCA-209ENST00000485946 PALM3A6NDB9 673 aaPredicted RBP7.7□□□□□ -1.18
PCCA-209ENST00000485946 SOX12O15370 315 aa7.7□□□□□ -1.18
PCCA-209ENST00000485946 LMOD1P29536 600 aaPredicted RBP7.7□□□□□ -1.18
PCCA-209ENST00000485946 GTF2F1P35269 517 aaKnown RBP eCLIP7.7□□□□□ -1.18
PCCA-209ENST00000485946 EMP3P54852 163 aa7.7□□□□□ -1.18
PCCA-209ENST00000485946 IDI1Q13907 227 aa7.7□□□□□ -1.18
PCCA-209ENST00000485946 NBPF1Q3BBV0 1214 aa7.7□□□□□ -1.18
PCCA-209ENST00000485946 BACH2Q9BYV9 841 aa7.7□□□□□ -1.18
PCCA-209ENST00000485946 SPC25Q9HBM1 224 aa7.7□□□□□ -1.18
PCCA-209ENST00000485946 RPGRIP1LQ68CZ1 1315 aa7.7□□□□□ -1.18
PCCA-209ENST00000485946 PPLO60437 1756 aa7.7□□□□□ -1.18
PCCA-209ENST00000485946 ZRANB2O95218 330 aaKnown RBP eCLIP7.69□□□□□ -1.18
PCCA-209ENST00000485946 POLD1P28340 1107 aa7.69□□□□□ -1.18
PCCA-209ENST00000485946 NKTRP30414 1462 aaKnown RBP7.69□□□□□ -1.18
PCCA-209ENST00000485946 ITGAEP38570 1179 aa7.69□□□□□ -1.18
PCCA-209ENST00000485946 GOLGA2Q08379 1002 aa7.69□□□□□ -1.18
PCCA-209ENST00000485946 BMS1Q14692 1282 aaKnown RBP7.69□□□□□ -1.18
PCCA-209ENST00000485946 FMNL3Q8IVF7 1028 aa7.69□□□□□ -1.18
PCCA-209ENST00000485946 TMC2Q8TDI7 906 aa7.69□□□□□ -1.18
PCCA-209ENST00000485946 TSPAN18Q96SJ8 248 aa7.69□□□□□ -1.18
PCCA-209ENST00000485946 PIK3R4Q99570 1358 aa7.69□□□□□ -1.18
PCCA-209ENST00000485946 TRIM34Q9BYJ4 488 aa7.69□□□□□ -1.18
PCCA-209ENST00000485946 ZFYVE9O95405 1425 aa7.69□□□□□ -1.18
PCCA-209ENST00000485946 DISP3Q9P2K9 1392 aa7.69□□□□□ -1.18
PCCA-209ENST00000485946 PLEKHG1Q9ULL1 1385 aa7.69□□□□□ -1.18
PCCA-209ENST00000485946 GNPATO15228 680 aa7.69□□□□□ -1.18
PCCA-209ENST00000485946 LMOD3Q0VAK6 560 aa7.69□□□□□ -1.18
PCCA-209ENST00000485946 RNF187Q5TA31 235 aaPredicted RBP7.69□□□□□ -1.18
PCCA-209ENST00000485946 ZKSCAN2Q63HK3 967 aa7.69□□□□□ -1.18
PCCA-209ENST00000485946 GET4Q7L5D6 327 aaPredicted RBP7.69□□□□□ -1.18
PCCA-209ENST00000485946 DDX27Q96GQ7 796 aaKnown RBP7.69□□□□□ -1.18
PCCA-209ENST00000485946 ZSWIM4Q9H7M6 989 aa7.69□□□□□ -1.18
PCCA-209ENST00000485946 MAP3K20Q9NYL2 800 aaKnown RBP7.69□□□□□ -1.18
PCCA-209ENST00000485946 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.69□□□□□ -1.18
PCCA-209ENST00000485946 DMGDHQ9UI17 866 aaKnown RBP7.69□□□□□ -1.18
PCCA-209ENST00000485946 IFT172Q9UG01 1749 aa7.68□□□□□ -1.18
PCCA-209ENST00000485946 CLTCL1P53675 1640 aa7.68□□□□□ -1.18
PCCA-209ENST00000485946 S100BP04271 92 aaPredicted RBP7.68□□□□□ -1.18
PCCA-209ENST00000485946 ATP2B1P20020 1258 aa7.68□□□□□ -1.18
PCCA-209ENST00000485946 CSPP1Q1MSJ5 1256 aa7.68□□□□□ -1.18
PCCA-209ENST00000485946 ZNF746Q6NUN9 644 aaPredicted RBP7.68□□□□□ -1.18
PCCA-209ENST00000485946 IFT57Q9NWB7 429 aa7.68□□□□□ -1.18
PCCA-209ENST00000485946 TPX2Q9ULW0 747 aaKnown RBP7.68□□□□□ -1.18
PCCA-209ENST00000485946 RIMS2Q9UQ26 1411 aa7.67□□□□□ -1.18
PCCA-209ENST00000485946 NCOA3Q9Y6Q9 1424 aa7.67□□□□□ -1.18
PCCA-209ENST00000485946 ERBB3P21860 1342 aa7.67□□□□□ -1.18
PCCA-209ENST00000485946 PDE4AP27815 886 aa7.67□□□□□ -1.18
PCCA-209ENST00000485946 ARMCX6Q7L4S7 300 aa7.67□□□□□ -1.18
PCCA-209ENST00000485946 PPARGC1BQ86YN6 1023 aaKnown RBP7.67□□□□□ -1.18
PCCA-209ENST00000485946 DDX56Q9NY93 547 aaKnown RBP7.67□□□□□ -1.18
PCCA-209ENST00000485946 NUB1Q9Y5A7 615 aa7.67□□□□□ -1.18
PCCA-209ENST00000485946 SETBP1Q9Y6X0 1596 aa7.67□□□□□ -1.18
PCCA-209ENST00000485946 SETD5Q9C0A6 1442 aa7.67□□□□□ -1.18
PCCA-209ENST00000485946 PRC1O43663 620 aa7.66□□□□□ -1.18
PCCA-209ENST00000485946 NRDCO43847 1150 aa7.66□□□□□ -1.18
PCCA-209ENST00000485946 HSD3B2P26439 372 aa7.66□□□□□ -1.18
PCCA-209ENST00000485946 PTGER2P43116 358 aa7.66□□□□□ -1.18
PCCA-209ENST00000485946 PCGF5Q86SE9 256 aa7.66□□□□□ -1.18
PCCA-209ENST00000485946 HELBQ8NG08 1087 aaPredicted RBP7.66□□□□□ -1.18
PCCA-209ENST00000485946 PMFBP1Q8TBY8 1022 aa7.66□□□□□ -1.18
PCCA-209ENST00000485946 ARMC5Q96C12 935 aa7.66□□□□□ -1.18
PCCA-209ENST00000485946 HS3ST6Q96QI5 342 aa7.66□□□□□ -1.18
PCCA-209ENST00000485946 FRMD4BQ9Y2L6 1034 aa7.66□□□□□ -1.18
PCCA-209ENST00000485946 SH3BP1Q9Y3L3 701 aa7.66□□□□□ -1.18
PCCA-209ENST00000485946 DHX16O60231 1041 aaKnown RBP7.66□□□□□ -1.18
PCCA-209ENST00000485946 PSEN1P49768 467 aa7.66□□□□□ -1.18
PCCA-209ENST00000485946 CCDC184Q52MB2 194 aa7.66□□□□□ -1.18
PCCA-209ENST00000485946 FILIP1Q7Z7B0 1213 aa7.66□□□□□ -1.18
PCCA-209ENST00000485946 CREBRFQ8IUR6 639 aa7.66□□□□□ -1.18
PCCA-209ENST00000485946 IL17RAQ96F46 866 aa7.66□□□□□ -1.18
PCCA-209ENST00000485946 LAMC1P11047 1609 aa7.65□□□□□ -1.18
PCCA-209ENST00000485946 ZNF335Q9H4Z2 1342 aaPredicted RBP7.65□□□□□ -1.18
PCCA-209ENST00000485946 LRRC7Q96NW7 1537 aa7.65□□□□□ -1.18
PCCA-209ENST00000485946 SCAMP3O14828 347 aaKnown RBP7.65□□□□□ -1.18
PCCA-209ENST00000485946 TOM1O60784 492 aa7.65□□□□□ -1.18
PCCA-209ENST00000485946 MMP14P50281 582 aa7.65□□□□□ -1.18
PCCA-209ENST00000485946 ICE2Q659A1 982 aa7.65□□□□□ -1.18
PCCA-209ENST00000485946 TMUB1Q9BVT8 246 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms