RNA–Protein interactions for RNA: ENST00000483538.1

POLR1A-207, Transcript of RNA polymerase I subunit A, humanhuman

TSL 4

Gene POLR1A, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-207ENST00000483538 ZBTB1Q9Y2K1 713 aa11.75□□□□□ -0.53
POLR1A-207ENST00000483538 BRCA1P38398 1863 aaKnown RBP11.74□□□□□ -0.53
POLR1A-207ENST00000483538 NEUROD2Q15784 382 aa11.74□□□□□ -0.53
POLR1A-207ENST00000483538 FMNL2Q96PY5 1086 aa11.74□□□□□ -0.53
POLR1A-207ENST00000483538 COL15A1P39059 1388 aa11.74□□□□□ -0.53
POLR1A-207ENST00000483538 SENP3-EIF4A1A0A087X0R7 540 aa11.73□□□□□ -0.53
POLR1A-207ENST00000483538 FLAD1Q8NFF5 587 aa11.73□□□□□ -0.53
POLR1A-207ENST00000483538 ARHGEF1Q92888 912 aaKnown RBP11.73□□□□□ -0.53
POLR1A-207ENST00000483538 RTCBQ9Y3I0 505 aaKnown RBP11.73□□□□□ -0.53
POLR1A-207ENST00000483538 ANKRD31Q8N7Z5 1873 aa11.72□□□□□ -0.53
POLR1A-207ENST00000483538 ANKRD36CQ5JPF3 1778 aa11.72□□□□□ -0.53
POLR1A-207ENST00000483538 N4BP2Q86UW6 1770 aaPredicted RBP11.72□□□□□ -0.53
POLR1A-207ENST00000483538 DLEC1Q9Y238 1755 aa11.72□□□□□ -0.53
POLR1A-207ENST00000483538 USP42Q9H9J4 1324 aaKnown RBP11.72□□□□□ -0.53
POLR1A-207ENST00000483538 ADRA2BP18089 450 aa11.72□□□□□ -0.53
POLR1A-207ENST00000483538 EIF4A1P60842 406 aaKnown RBP11.72□□□□□ -0.53
POLR1A-207ENST00000483538 LMOD3Q0VAK6 560 aa11.72□□□□□ -0.53
POLR1A-207ENST00000483538 SRP68Q9UHB9 627 aaKnown RBP11.72□□□□□ -0.53
POLR1A-207ENST00000483538 USP16Q9Y5T5 823 aa11.72□□□□□ -0.53
POLR1A-207ENST00000483538 NUP98P52948 1817 aa11.72□□□□□ -0.53
POLR1A-207ENST00000483538 MSH5O43196 834 aa11.71□□□□□ -0.53
POLR1A-207ENST00000483538 A1BGP04217 495 aa11.71□□□□□ -0.53
POLR1A-207ENST00000483538 GYS1P13807 737 aa11.71□□□□□ -0.53
POLR1A-207ENST00000483538 HMGB2P26583 209 aaKnown RBP11.71□□□□□ -0.53
POLR1A-207ENST00000483538 PIP4K2AP48426 406 aaPredicted RBP11.71□□□□□ -0.53
POLR1A-207ENST00000483538 COL11A2P13942 1736 aaPredicted RBP11.71□□□□□ -0.54
POLR1A-207ENST00000483538 NBPF26B4DH59 902 aa11.7□□□□□ -0.54
POLR1A-207ENST00000483538 CHL1O00533 1208 aa11.7□□□□□ -0.54
POLR1A-207ENST00000483538 GIGYF1O75420 1035 aaPredicted RBP11.7□□□□□ -0.54
POLR1A-207ENST00000483538 SNRPA1P09661 255 aaKnown RBP11.7□□□□□ -0.54
POLR1A-207ENST00000483538 ZNF853P0CG23 659 aa11.7□□□□□ -0.54
POLR1A-207ENST00000483538 EIF5P55010 431 aaKnown RBP11.7□□□□□ -0.54
POLR1A-207ENST00000483538 KRT24Q2M2I5 525 aa11.7□□□□□ -0.54
POLR1A-207ENST00000483538 TRAPPC3LQ5T215 181 aa11.7□□□□□ -0.54
POLR1A-207ENST00000483538 NBPF10Q6P3W6 841 aaKnown RBP11.7□□□□□ -0.54
POLR1A-207ENST00000483538 NBPF15Q8N660 670 aa11.7□□□□□ -0.54
POLR1A-207ENST00000483538 BCL2L12Q9HB09 334 aa11.7□□□□□ -0.54
POLR1A-207ENST00000483538 TSPYL4Q9UJ04 414 aa11.7□□□□□ -0.54
POLR1A-207ENST00000483538 GOLGB1Q14789 3259 aaKnown RBP11.7□□□□□ -0.54
POLR1A-207ENST00000483538 C10orf71Q711Q0 1435 aa11.69□□□□□ -0.54
POLR1A-207ENST00000483538 STARD3NLO95772 234 aa11.69□□□□□ -0.54
POLR1A-207ENST00000483538 CANXP27824 592 aaKnown RBP11.69□□□□□ -0.54
POLR1A-207ENST00000483538 ARXQ96QS3 562 aa11.69□□□□□ -0.54
POLR1A-207ENST00000483538 FHDC1Q9C0D6 1143 aaPredicted RBP11.69□□□□□ -0.54
POLR1A-207ENST00000483538 ARFGEF2Q9Y6D5 1785 aa11.69□□□□□ -0.54
POLR1A-207ENST00000483538 FKBP8Q14318 412 aa11.68□□□□□ -0.54
POLR1A-207ENST00000483538 CCDC27Q2M243 656 aa11.68□□□□□ -0.54
POLR1A-207ENST00000483538 TEX13AQ9BXU3 409 aaPredicted RBP11.68□□□□□ -0.54
POLR1A-207ENST00000483538 BABAM1Q9NWV8 329 aa11.68□□□□□ -0.54
POLR1A-207ENST00000483538 RFC4P35249 363 aa11.67□□□□□ -0.54
POLR1A-207ENST00000483538 IL6STP40189 918 aaPredicted RBP11.67□□□□□ -0.54
POLR1A-207ENST00000483538 DDR1Q08345 913 aa11.67□□□□□ -0.54
POLR1A-207ENST00000483538 USPL1Q5W0Q7 1092 aa11.67□□□□□ -0.54
POLR1A-207ENST00000483538 LRP10Q7Z4F1 713 aa11.67□□□□□ -0.54
POLR1A-207ENST00000483538 WWC1Q8IX03 1113 aa11.67□□□□□ -0.54
POLR1A-207ENST00000483538 FAM9BQ8IZU0 186 aa11.67□□□□□ -0.54
POLR1A-207ENST00000483538 CFAP44Q96MT7 982 aa11.67□□□□□ -0.54
POLR1A-207ENST00000483538 MBIPQ9NS73 344 aa11.67□□□□□ -0.54
POLR1A-207ENST00000483538 PPP1R1BQ9UD71 204 aaPredicted RBP11.67□□□□□ -0.54
POLR1A-207ENST00000483538 TNRC6CQ9HCJ0 1690 aaKnown RBP11.67□□□□□ -0.54
POLR1A-207ENST00000483538 UTRNP46939 3433 aa11.67□□□□□ -0.54
POLR1A-207ENST00000483538 PXDNLA1KZ92 1463 aa11.66□□□□□ -0.54
POLR1A-207ENST00000483538 MMP10P09238 476 aa11.66□□□□□ -0.54
POLR1A-207ENST00000483538 NLGN2Q8NFZ4 835 aa11.66□□□□□ -0.54
POLR1A-207ENST00000483538 SYT17Q9BSW7 474 aa11.66□□□□□ -0.54
POLR1A-207ENST00000483538 IFT57Q9NWB7 429 aa11.66□□□□□ -0.54
POLR1A-207ENST00000483538 NARFQ9UHQ1 456 aa11.66□□□□□ -0.54
POLR1A-207ENST00000483538 CCER2I3L3R5 266 aa11.65□□□□□ -0.54
POLR1A-207ENST00000483538 CAMTA2O94983 1202 aa11.65□□□□□ -0.54
POLR1A-207ENST00000483538 POLD1P28340 1107 aa11.65□□□□□ -0.54
POLR1A-207ENST00000483538 PDIA6Q15084 440 aa11.65□□□□□ -0.54
POLR1A-207ENST00000483538 NCBP3Q53F19 620 aaKnown RBP11.65□□□□□ -0.54
POLR1A-207ENST00000483538 DIEXFQ68CQ4 756 aaKnown RBP11.65□□□□□ -0.54
POLR1A-207ENST00000483538 CACNA1SQ13698 1873 aa11.65□□□□□ -0.54
POLR1A-207ENST00000483538 CARMIL3Q8ND23 1372 aa11.65□□□□□ -0.55
POLR1A-207ENST00000483538 ZNF521Q96K83 1311 aa11.64□□□□□ -0.55
POLR1A-207ENST00000483538 TM4SF1P30408 202 aa11.64□□□□□ -0.55
POLR1A-207ENST00000483538 PROSER3Q2NL68 480 aa11.64□□□□□ -0.55
POLR1A-207ENST00000483538 MIER1Q8N108 512 aa11.64□□□□□ -0.55
POLR1A-207ENST00000483538 NLGN1Q8N2Q7 840 aa11.64□□□□□ -0.55
POLR1A-207ENST00000483538 TBC1D2BQ9UPU7 963 aa11.64□□□□□ -0.55
POLR1A-207ENST00000483538 LAS1LQ9Y4W2 734 aaKnown RBP11.64□□□□□ -0.55
POLR1A-207ENST00000483538 ARFGEF1Q9Y6D6 1849 aa11.64□□□□□ -0.55
POLR1A-207ENST00000483538 POLRMTO00411 1230 aaKnown RBP11.63□□□□□ -0.55
POLR1A-207ENST00000483538 NFIXQ14938 502 aa11.63□□□□□ -0.55
POLR1A-207ENST00000483538 TSR2Q969E8 191 aaKnown RBP11.63□□□□□ -0.55
POLR1A-207ENST00000483538 SPINK5Q9NQ38 1064 aaPredicted RBP11.63□□□□□ -0.55
POLR1A-207ENST00000483538 ZNF330Q9Y3S2 320 aaPredicted RBP11.63□□□□□ -0.55
POLR1A-207ENST00000483538 LAMB2P55268 1798 aa11.63□□□□□ -0.55
POLR1A-207ENST00000483538 IL16Q14005 1332 aa11.62□□□□□ -0.55
POLR1A-207ENST00000483538 ERBB4Q15303 1308 aa11.62□□□□□ -0.55
POLR1A-207ENST00000483538 ANXA1P04083 346 aa11.62□□□□□ -0.55
POLR1A-207ENST00000483538 GNAI1P63096 354 aa11.62□□□□□ -0.55
POLR1A-207ENST00000483538 TBC1D9BQ66K14 1250 aa11.62□□□□□ -0.55
POLR1A-207ENST00000483538 DZIP3Q86Y13 1208 aaKnown RBP11.62□□□□□ -0.55
POLR1A-207ENST00000483538 FANCIQ9NVI1 1328 aa11.61□□□□□ -0.55
POLR1A-207ENST00000483538 ATP10DQ9P241 1426 aa11.61□□□□□ -0.55
POLR1A-207ENST00000483538 DDX60Q8IY21 1712 aaKnown RBP11.61□□□□□ -0.55
POLR1A-207ENST00000483538 A0A087WZG4 1122 aa11.61□□□□□ -0.55
POLR1A-207ENST00000483538 ZPR1O75312 459 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms