RNA–Protein interactions for RNA: ENST00000482871.5

MSL3-215, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-215ENST00000482871 E9PSI1 815 aa10.95□□□□□ -0.66
MSL3-215ENST00000482871 RFX1P22670 979 aa10.95□□□□□ -0.66
MSL3-215ENST00000482871 CFAP70Q5T0N1 1121 aa10.95□□□□□ -0.66
MSL3-215ENST00000482871 RETREG3Q86VR2 466 aa10.95□□□□□ -0.66
MSL3-215ENST00000482871 ADAMTS19Q8TE59 1207 aa10.95□□□□□ -0.66
MSL3-215ENST00000482871 NDUFB9Q9Y6M9 179 aa10.95□□□□□ -0.66
MSL3-215ENST00000482871 SETBP1Q9Y6X0 1596 aa10.94□□□□□ -0.66
MSL3-215ENST00000482871 PPEF1O14829 653 aaPredicted RBP10.94□□□□□ -0.66
MSL3-215ENST00000482871 WASHC4Q2M389 1173 aa10.94□□□□□ -0.66
MSL3-215ENST00000482871 MSS51Q4VC12 460 aa10.94□□□□□ -0.66
MSL3-215ENST00000482871 RTL5Q5HYW3 569 aaPredicted RBP10.94□□□□□ -0.66
MSL3-215ENST00000482871 MYOM2P54296 1465 aa10.93□□□□□ -0.66
MSL3-215ENST00000482871 ADAMTS13Q76LX8 1427 aa10.93□□□□□ -0.66
MSL3-215ENST00000482871 CHD2O14647 1828 aaKnown RBP10.93□□□□□ -0.66
MSL3-215ENST00000482871 ZNF335Q9H4Z2 1342 aaPredicted RBP10.93□□□□□ -0.66
MSL3-215ENST00000482871 PRR7Q8TB68 274 aa10.93□□□□□ -0.66
MSL3-215ENST00000482871 GJD4Q96KN9 370 aaPredicted RBP10.93□□□□□ -0.66
MSL3-215ENST00000482871 NRXN3Q9Y4C0 1643 aa10.93□□□□□ -0.66
MSL3-215ENST00000482871 DIP2AQ14689 1571 aa10.93□□□□□ -0.66
MSL3-215ENST00000482871 ALKQ9UM73 1620 aa10.92□□□□□ -0.66
MSL3-215ENST00000482871 PRPF38BQ5VTL8 546 aaKnown RBP10.92□□□□□ -0.66
MSL3-215ENST00000482871 TSC1Q92574 1164 aa10.92□□□□□ -0.66
MSL3-215ENST00000482871 PIK3C2GO75747 1445 aa10.92□□□□□ -0.66
MSL3-215ENST00000482871 RNF223E7ERA6 249 aa10.91□□□□□ -0.66
MSL3-215ENST00000482871 IGSF3O75054 1194 aa10.91□□□□□ -0.66
MSL3-215ENST00000482871 KCNA6P17658 529 aa10.91□□□□□ -0.66
MSL3-215ENST00000482871 PPP1R12CQ9BZL4 782 aa10.91□□□□□ -0.66
MSL3-215ENST00000482871 C14orf93Q9H972 538 aaKnown RBP10.91□□□□□ -0.66
MSL3-215ENST00000482871 AMOTL2Q9Y2J4 779 aa10.91□□□□□ -0.66
MSL3-215ENST00000482871 PIK3R4Q99570 1358 aa10.9□□□□□ -0.66
MSL3-215ENST00000482871 STRCP1A6NGW2 1772 aa10.9□□□□□ -0.66
MSL3-215ENST00000482871 NRXN1Q9ULB1 1477 aa10.9□□□□□ -0.66
MSL3-215ENST00000482871 LAMC1P11047 1609 aa10.9□□□□□ -0.66
MSL3-215ENST00000482871 METP08581 1390 aa10.9□□□□□ -0.67
MSL3-215ENST00000482871 SETD1AO15047 1707 aaKnown RBP10.89□□□□□ -0.67
MSL3-215ENST00000482871 CCDC27Q2M243 656 aa10.89□□□□□ -0.67
MSL3-215ENST00000482871 TMEM132EQ6IEE7 984 aa10.89□□□□□ -0.67
MSL3-215ENST00000482871 CFAP99D6REC4 459 aa10.88□□□□□ -0.67
MSL3-215ENST00000482871 JUNDP17535 347 aa10.88□□□□□ -0.67
MSL3-215ENST00000482871 PRAG1Q86YV5 1406 aa10.88□□□□□ -0.67
MSL3-215ENST00000482871 STK26Q9P289 416 aa10.88□□□□□ -0.67
MSL3-215ENST00000482871 FCF1Q9Y324 198 aaKnown RBP10.88□□□□□ -0.67
MSL3-215ENST00000482871 IVNS1ABPQ9Y6Y0 642 aa10.88□□□□□ -0.67
MSL3-215ENST00000482871 KIAA1210Q9ULL0 1709 aa10.87□□□□□ -0.67
MSL3-215ENST00000482871 ANKLE1Q8NAG6 615 aa10.87□□□□□ -0.67
MSL3-215ENST00000482871 CPS1P31327 1500 aa10.87□□□□□ -0.67
MSL3-215ENST00000482871 LTBP4Q8N2S1 1624 aa10.87□□□□□ -0.67
MSL3-215ENST00000482871 CARNS1A5YM72 827 aa10.86□□□□□ -0.67
MSL3-215ENST00000482871 DXOO77932 396 aaKnown RBP10.86□□□□□ -0.67
MSL3-215ENST00000482871 MMP16P51512 607 aa10.86□□□□□ -0.67
MSL3-215ENST00000482871 CCDC24Q8N4L8 307 aa10.86□□□□□ -0.67
MSL3-215ENST00000482871 NWD1Q149M9 1564 aa10.86□□□□□ -0.67
MSL3-215ENST00000482871 PTPRUQ92729 1446 aa10.85□□□□□ -0.67
MSL3-215ENST00000482871 PALM3A6NDB9 673 aaPredicted RBP10.85□□□□□ -0.67
MSL3-215ENST00000482871 NBPF8Q3BBV2 869 aa10.85□□□□□ -0.67
MSL3-215ENST00000482871 SND1Q7KZF4 910 aaKnown RBP eCLIP10.85□□□□□ -0.67
MSL3-215ENST00000482871 YTHDC2Q9H6S0 1430 aaKnown RBP10.84□□□□□ -0.67
MSL3-215ENST00000482871 XRN1Q8IZH2 1706 aaKnown RBP10.84□□□□□ -0.67
MSL3-215ENST00000482871 ANP32CO43423 234 aa10.84□□□□□ -0.67
MSL3-215ENST00000482871 GPR37L1O60883 481 aa10.84□□□□□ -0.67
MSL3-215ENST00000482871 NBPF1Q3BBV0 1214 aa10.84□□□□□ -0.67
MSL3-215ENST00000482871 HELBQ8NG08 1087 aaPredicted RBP10.84□□□□□ -0.67
MSL3-215ENST00000482871 ALG2Q9H553 416 aa10.84□□□□□ -0.67
MSL3-215ENST00000482871 VRTNQ9H8Y1 702 aa10.84□□□□□ -0.67
MSL3-215ENST00000482871 LRPPRCP42704 1394 aaKnown RBP10.84□□□□□ -0.67
MSL3-215ENST00000482871 NKTRP30414 1462 aaKnown RBP10.84□□□□□ -0.67
MSL3-215ENST00000482871 XIRP1Q702N8 1843 aaKnown RBP10.84□□□□□ -0.67
MSL3-215ENST00000482871 TRPM1Q7Z4N2 1603 aa10.84□□□□□ -0.67
MSL3-215ENST00000482871 LRRC7Q96NW7 1537 aa10.84□□□□□ -0.67
MSL3-215ENST00000482871 LMOD1P29536 600 aaPredicted RBP10.83□□□□□ -0.68
MSL3-215ENST00000482871 VAC14Q08AM6 782 aa10.83□□□□□ -0.68
MSL3-215ENST00000482871 TRIM34Q9BYJ4 488 aa10.83□□□□□ -0.68
MSL3-215ENST00000482871 TRAK1Q9UPV9 953 aa10.83□□□□□ -0.68
MSL3-215ENST00000482871 ASXL1Q8IXJ9 1541 aa10.83□□□□□ -0.68
MSL3-215ENST00000482871 ROCK2O75116 1388 aaKnown RBP10.82□□□□□ -0.68
MSL3-215ENST00000482871 TMEM94Q12767 1356 aa10.82□□□□□ -0.68
MSL3-215ENST00000482871 ABCC11Q96J66 1382 aa10.82□□□□□ -0.68
MSL3-215ENST00000482871 KNDC1Q76NI1 1749 aa10.82□□□□□ -0.68
MSL3-215ENST00000482871 CCER2I3L3R5 266 aa10.82□□□□□ -0.68
MSL3-215ENST00000482871 NUDT12Q9BQG2 462 aa10.82□□□□□ -0.68
MSL3-215ENST00000482871 HMX1Q9NP08 348 aaPredicted RBP10.82□□□□□ -0.68
MSL3-215ENST00000482871 POGKQ9P215 609 aa10.82□□□□□ -0.68
MSL3-215ENST00000482871 ADGRB1O14514 1584 aa10.82□□□□□ -0.68
MSL3-215ENST00000482871 ROBO2Q9HCK4 1378 aa10.81□□□□□ -0.68
MSL3-215ENST00000482871 ATG7O95352 703 aa10.81□□□□□ -0.68
MSL3-215ENST00000482871 PLA2G2CQ5R387 149 aa10.81□□□□□ -0.68
MSL3-215ENST00000482871 DESI1Q6ICB0 168 aa10.81□□□□□ -0.68
MSL3-215ENST00000482871 WAPLQ7Z5K2 1190 aa10.81□□□□□ -0.68
MSL3-215ENST00000482871 PRKD2Q9BZL6 878 aa10.81□□□□□ -0.68
MSL3-215ENST00000482871 TMEM88BA6NKF7 163 aa10.8□□□□□ -0.68
MSL3-215ENST00000482871 DDX10Q13206 875 aaKnown RBP10.8□□□□□ -0.68
MSL3-215ENST00000482871 PTPRNQ16849 979 aa10.8□□□□□ -0.68
MSL3-215ENST00000482871 SIRT1Q96EB6 747 aa10.8□□□□□ -0.68
MSL3-215ENST00000482871 PRAM1Q96QH2 718 aa10.8□□□□□ -0.68
MSL3-215ENST00000482871 CARD11Q9BXL7 1154 aa10.8□□□□□ -0.68
MSL3-215ENST00000482871 TFIP11Q9UBB9 837 aaKnown RBP10.8□□□□□ -0.68
MSL3-215ENST00000482871 PTCH1Q13635 1447 aa10.8□□□□□ -0.68
MSL3-215ENST00000482871 MSH6P52701 1360 aa10.79□□□□□ -0.68
MSL3-215ENST00000482871 TECPR2O15040 1411 aa10.79□□□□□ -0.68
MSL3-215ENST00000482871 NCOA3Q9Y6Q9 1424 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms