RNA–Protein interactions for RNA: ENST00000482871.5

MSL3-215, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-215ENST00000482871 AEBP2Q6ZN18 517 aaPredicted RBP27.28■■□□□ 1.96
MSL3-215ENST00000482871 CHIC1Q5VXU3 224 aa26.62■■□□□ 1.85
MSL3-215ENST00000482871 PHF23Q9BUL5 403 aaPredicted RBP23.41■■□□□ 1.34
MSL3-215ENST00000482871 SENP3Q9H4L4 574 aaPredicted RBP23.17■■□□□ 1.3
MSL3-215ENST00000482871 PLPPR3Q6T4P5 718 aa21.63■■□□□ 1.05
MSL3-215ENST00000482871 FOXD1Q16676 465 aa21.51■■□□□ 1.03
MSL3-215ENST00000482871 ADRA2BP18089 450 aa20.7■□□□□ 0.9
MSL3-215ENST00000482871 PPP6R1Q9UPN7 881 aa20.68■□□□□ 0.9
MSL3-215ENST00000482871 PIAS4Q8N2W9 510 aaPredicted RBP20.33■□□□□ 0.85
MSL3-215ENST00000482871 MSH5O43196 834 aa19.85■□□□□ 0.77
MSL3-215ENST00000482871 POTEDQ86YR6 584 aa19.84■□□□□ 0.77
MSL3-215ENST00000482871 PPP4R3CPQ6ZMV5 832 aa19.07■□□□□ 0.64
MSL3-215ENST00000482871 SCAF1Q9H7N4 1312 aaKnown RBP18.93■□□□□ 0.62
MSL3-215ENST00000482871 MAPK8IP2Q13387 824 aaPredicted RBP18.79■□□□□ 0.6
MSL3-215ENST00000482871 KCNA4P22459 653 aa18.61■□□□□ 0.57
MSL3-215ENST00000482871 NCBP3Q53F19 620 aaKnown RBP18.58■□□□□ 0.56
MSL3-215ENST00000482871 CNKSR2Q8WXI2 1034 aa18.53■□□□□ 0.56
MSL3-215ENST00000482871 DMRT2Q9Y5R5 561 aa18.47■□□□□ 0.55
MSL3-215ENST00000482871 NPM3O75607 178 aaKnown RBP18.28■□□□□ 0.52
MSL3-215ENST00000482871 RNF216Q9NWF9 866 aaPredicted RBP18.15■□□□□ 0.5
MSL3-215ENST00000482871 HOXD11P31277 338 aaPredicted RBP18.06■□□□□ 0.48
MSL3-215ENST00000482871 NISCHQ9Y2I1 1504 aa18.06■□□□□ 0.48
MSL3-215ENST00000482871 DCAF8L1A6NGE4 600 aa17.83■□□□□ 0.44
MSL3-215ENST00000482871 SLC4A1APQ9BWU0 796 aaKnown RBP17.74■□□□□ 0.43
MSL3-215ENST00000482871 EHMT2Q96KQ7 1210 aa17.63■□□□□ 0.41
MSL3-215ENST00000482871 DNAJC5BQ9UF47 199 aa17.62■□□□□ 0.41
MSL3-215ENST00000482871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.32■□□□□ 0.36
MSL3-215ENST00000482871 SLC4A2P04920 1241 aa17.25■□□□□ 0.35
MSL3-215ENST00000482871 FOXD4L1Q9NU39 408 aa17.13■□□□□ 0.33
MSL3-215ENST00000482871 ZBTB22O15209 634 aa17.1■□□□□ 0.33
MSL3-215ENST00000482871 CSRNP3Q8WYN3 585 aa16.99■□□□□ 0.31
MSL3-215ENST00000482871 RNF39Q9H2S5 420 aa16.98■□□□□ 0.31
MSL3-215ENST00000482871 U3KPZ7 1027 aaPredicted RBP16.97■□□□□ 0.31
MSL3-215ENST00000482871 CACNB1Q02641 598 aaPredicted RBP16.94■□□□□ 0.3
MSL3-215ENST00000482871 MYCNP04198 464 aaPredicted RBP16.9■□□□□ 0.3
MSL3-215ENST00000482871 C1QBPQ07021 282 aaKnown RBP16.78■□□□□ 0.28
MSL3-215ENST00000482871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.76■□□□□ 0.27
MSL3-215ENST00000482871 HNRNPUL2Q1KMD3 747 aaKnown RBP16.76■□□□□ 0.27
MSL3-215ENST00000482871 SAMD1Q6SPF0 538 aaPredicted RBP16.7■□□□□ 0.26
MSL3-215ENST00000482871 APLP2Q06481 763 aa16.61■□□□□ 0.25
MSL3-215ENST00000482871 SPINK5Q9NQ38 1064 aaPredicted RBP16.54■□□□□ 0.24
MSL3-215ENST00000482871 CAPN15O75808 1086 aa16.52■□□□□ 0.24
MSL3-215ENST00000482871 ATXN8OSP0DMR3 200 aa16.49■□□□□ 0.23
MSL3-215ENST00000482871 ATF5Q9Y2D1 282 aaPredicted RBP16.46■□□□□ 0.23
MSL3-215ENST00000482871 TRHP20396 242 aaPredicted RBP16.44■□□□□ 0.22
MSL3-215ENST00000482871 ZNF219Q9P2Y4 722 aaPredicted RBP16.38■□□□□ 0.21
MSL3-215ENST00000482871 ABCB7O75027 752 aa16.21■□□□□ 0.19
MSL3-215ENST00000482871 DSG3P32926 999 aa16.17■□□□□ 0.18
MSL3-215ENST00000482871 POLA2Q14181 598 aa16.13■□□□□ 0.17
MSL3-215ENST00000482871 SLC24A1O60721 1099 aa16.05■□□□□ 0.16
MSL3-215ENST00000482871 CCDC180Q9P1Z9 1646 aa16■□□□□ 0.15
MSL3-215ENST00000482871 ZBTB12Q9Y330 459 aaPredicted RBP15.83■□□□□ 0.12
MSL3-215ENST00000482871 FBLN2P98095 1184 aa15.81■□□□□ 0.12
MSL3-215ENST00000482871 AMER1Q5JTC6 1135 aaPredicted RBP15.8■□□□□ 0.12
MSL3-215ENST00000482871 RTN4Q9NQC3 1192 aaKnown RBP15.8■□□□□ 0.12
MSL3-215ENST00000482871 MKRN4PQ13434 485 aaPredicted RBP15.72■□□□□ 0.11
MSL3-215ENST00000482871 OSCARQ8IYS5 282 aa15.59■□□□□ 0.09
MSL3-215ENST00000482871 ABCC9O60706 1549 aa15.53■□□□□ 0.08
MSL3-215ENST00000482871 POTEHQ6S545 545 aa15.44■□□□□ 0.06
MSL3-215ENST00000482871 FKBP8Q14318 412 aa15.43■□□□□ 0.06
MSL3-215ENST00000482871 RBM42Q9BTD8 480 aaKnown RBP15.43■□□□□ 0.06
MSL3-215ENST00000482871 SPDYE2BA6NHP3 402 aa15.4■□□□□ 0.06
MSL3-215ENST00000482871 SPDYE4A6NLX3 237 aa15.4■□□□□ 0.06
MSL3-215ENST00000482871 SPDYE6P0CI01 402 aa15.4■□□□□ 0.06
MSL3-215ENST00000482871 SPDYE2Q495Y8 402 aa15.4■□□□□ 0.06
MSL3-215ENST00000482871 ZNF692Q9BU19 519 aaPredicted RBP15.38■□□□□ 0.05
MSL3-215ENST00000482871 SSUH2Q9Y2M2 353 aa15.24■□□□□ 0.03
MSL3-215ENST00000482871 AKT1S1Q96B36 256 aa15.22■□□□□ 0.03
MSL3-215ENST00000482871 PABPN1Q86U42 306 aaKnown RBP eCLIP15.18■□□□□ 0.02
MSL3-215ENST00000482871 DCAF8L2P0C7V8 631 aa15.15■□□□□ 0.02
MSL3-215ENST00000482871 REM2Q8IYK8 340 aaPredicted RBP15.09■□□□□ 0.01
MSL3-215ENST00000482871 ZCCHC6Q5VYS8 1495 aaKnown RBP15.06■□□□□ 0
MSL3-215ENST00000482871 PROM2Q8N271 834 aa15.04■□□□□ -0
MSL3-215ENST00000482871 NACADO15069 1562 aa15.01□□□□□ -0.01
MSL3-215ENST00000482871 RB1CC1Q8TDY2 1594 aa15□□□□□ -0.01
MSL3-215ENST00000482871 CLEC11AQ9Y240 323 aa14.98□□□□□ -0.01
MSL3-215ENST00000482871 SPDYE1Q8NFV5 336 aaPredicted RBP14.97□□□□□ -0.01
MSL3-215ENST00000482871 MYO15BQ96JP2 1530 aa14.92□□□□□ -0.02
MSL3-215ENST00000482871 DCAF1Q9Y4B6 1507 aa14.92□□□□□ -0.02
MSL3-215ENST00000482871 PITPNM1O00562 1244 aa14.92□□□□□ -0.02
MSL3-215ENST00000482871 STAG3Q9UJ98 1225 aa14.89□□□□□ -0.03
MSL3-215ENST00000482871 FBXO3Q9UK99 471 aa14.85□□□□□ -0.03
MSL3-215ENST00000482871 PRR29P0C7W0 189 aa14.8□□□□□ -0.04
MSL3-215ENST00000482871 CHRDL2Q6WN34 429 aa14.8□□□□□ -0.04
MSL3-215ENST00000482871 UNC13AQ9UPW8 1703 aa14.69□□□□□ -0.06
MSL3-215ENST00000482871 MIER1Q8N108 512 aa14.65□□□□□ -0.06
MSL3-215ENST00000482871 VASPP50552 380 aaPredicted RBP14.64□□□□□ -0.07
MSL3-215ENST00000482871 SCRIBQ14160 1630 aa14.63□□□□□ -0.07
MSL3-215ENST00000482871 PLCD3Q8N3E9 789 aa14.63□□□□□ -0.07
MSL3-215ENST00000482871 FXR2P51116 673 aaKnown RBP eCLIP14.61□□□□□ -0.07
MSL3-215ENST00000482871 PIP4P2Q8N4L2 257 aa14.6□□□□□ -0.07
MSL3-215ENST00000482871 CHADLQ6NUI6 762 aa14.59□□□□□ -0.07
MSL3-215ENST00000482871 PLEKHG5O94827 1062 aa14.58□□□□□ -0.08
MSL3-215ENST00000482871 PRKAR2AP13861 404 aaKnown RBP14.57□□□□□ -0.08
MSL3-215ENST00000482871 CREBZFQ9NS37 354 aa14.56□□□□□ -0.08
MSL3-215ENST00000482871 PLCB2Q00722 1185 aa14.53□□□□□ -0.08
MSL3-215ENST00000482871 BICRAQ9NZM4 1560 aa14.5□□□□□ -0.09
MSL3-215ENST00000482871 KLHL34Q8N239 644 aa14.47□□□□□ -0.09
MSL3-215ENST00000482871 IFNLR1Q8IU57 520 aaPredicted RBP14.43□□□□□ -0.1
MSL3-215ENST00000482871 ZBTB47Q9UFB7 747 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms