RNA–Protein interactions for RNA: ENST00000478736.1

PDE1C-208, Transcript of phosphodiesterase 1C, humanhuman

TSL 3

Gene PDE1C, Length 495 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-208ENST00000478736 PPARGC1BQ86YN6 1023 aaKnown RBP3.61□□□□□ -1.83
PDE1C-208ENST00000478736 CCDC125Q86Z20 511 aa3.61□□□□□ -1.83
PDE1C-208ENST00000478736 SLC9A9Q8IVB4 645 aa3.61□□□□□ -1.83
PDE1C-208ENST00000478736 SIX5Q8N196 739 aa3.61□□□□□ -1.83
PDE1C-208ENST00000478736 RUBCNLQ9H714 662 aa3.61□□□□□ -1.83
PDE1C-208ENST00000478736 VRTNQ9H8Y1 702 aa3.61□□□□□ -1.83
PDE1C-208ENST00000478736 TIMMDC1Q9NPL8 285 aa3.61□□□□□ -1.83
PDE1C-208ENST00000478736 HCN4Q9Y3Q4 1203 aa3.61□□□□□ -1.83
PDE1C-208ENST00000478736 LZTS3O60299 673 aaPredicted RBP3.6□□□□□ -1.83
PDE1C-208ENST00000478736 MSX1P28360 303 aa3.6□□□□□ -1.83
PDE1C-208ENST00000478736 FAM69CQ0P6D2 419 aa3.6□□□□□ -1.83
PDE1C-208ENST00000478736 UBAP2LQ14157 1087 aaKnown RBP3.6□□□□□ -1.83
PDE1C-208ENST00000478736 GRIN2CQ14957 1233 aa3.6□□□□□ -1.83
PDE1C-208ENST00000478736 ESCO1Q5FWF5 840 aa3.6□□□□□ -1.83
PDE1C-208ENST00000478736 RIPOR1Q6ZS17 1223 aa3.6□□□□□ -1.83
PDE1C-208ENST00000478736 TAS1R3Q7RTX0 852 aa3.6□□□□□ -1.83
PDE1C-208ENST00000478736 ANKMY2Q8IV38 441 aa3.6□□□□□ -1.83
PDE1C-208ENST00000478736 LARGE2Q8N3Y3 721 aa3.6□□□□□ -1.83
PDE1C-208ENST00000478736 C7orf43Q8WVR3 580 aa3.6□□□□□ -1.83
PDE1C-208ENST00000478736 AIDAQ96BJ3 306 aa3.6□□□□□ -1.83
PDE1C-208ENST00000478736 SIRT1Q96EB6 747 aa3.6□□□□□ -1.83
PDE1C-208ENST00000478736 PRIMPOLQ96LW4 560 aa3.6□□□□□ -1.83
PDE1C-208ENST00000478736 CABP1Q9NZU7 370 aa3.6□□□□□ -1.83
PDE1C-208ENST00000478736 SCHIP1Q9P0W5 487 aaPredicted RBP3.6□□□□□ -1.83
PDE1C-208ENST00000478736 CDK2AP1O14519 115 aa3.59□□□□□ -1.83
PDE1C-208ENST00000478736 ATP4AP20648 1035 aa3.59□□□□□ -1.83
PDE1C-208ENST00000478736 GAS6Q14393 721 aa3.59□□□□□ -1.83
PDE1C-208ENST00000478736 LARP1Q6PKG0 1096 aaKnown RBP3.59□□□□□ -1.83
PDE1C-208ENST00000478736 RHBDD1Q8TEB9 315 aa3.59□□□□□ -1.83
PDE1C-208ENST00000478736 CHMP7Q8WUX9 453 aaPredicted RBP3.59□□□□□ -1.83
PDE1C-208ENST00000478736 GTPBP3Q969Y2 492 aaKnown RBP3.59□□□□□ -1.83
PDE1C-208ENST00000478736 ZNF837Q96EG3 531 aaPredicted RBP3.59□□□□□ -1.83
PDE1C-208ENST00000478736 COL25A1Q9BXS0 654 aaPredicted RBP3.59□□□□□ -1.83
PDE1C-208ENST00000478736 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.83
PDE1C-208ENST00000478736 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.83
PDE1C-208ENST00000478736 NOVA2Q9UNW9 492 aaKnown RBP3.59□□□□□ -1.83
PDE1C-208ENST00000478736 KRTAP4-8A0A0G2JLE6 195 aa3.58□□□□□ -1.84
PDE1C-208ENST00000478736 FAM196BA6NMK8 535 aa3.58□□□□□ -1.84
PDE1C-208ENST00000478736 EML1O00423 815 aa3.58□□□□□ -1.84
PDE1C-208ENST00000478736 NOS2P35228 1153 aa3.58□□□□□ -1.84
PDE1C-208ENST00000478736 GSK3AP49840 483 aa3.58□□□□□ -1.84
PDE1C-208ENST00000478736 ATP1A2P50993 1020 aa3.58□□□□□ -1.84
PDE1C-208ENST00000478736 SEC13P55735 322 aa3.58□□□□□ -1.84
PDE1C-208ENST00000478736 KCNMA1Q12791 1236 aa3.58□□□□□ -1.84
PDE1C-208ENST00000478736 TMEM164Q5U3C3 297 aa3.58□□□□□ -1.84
PDE1C-208ENST00000478736 TRIM50Q86XT4 487 aa3.58□□□□□ -1.84
PDE1C-208ENST00000478736 WHAMMQ8TF30 809 aa3.58□□□□□ -1.84
PDE1C-208ENST00000478736 SCG3Q8WXD2 468 aaKnown RBP3.58□□□□□ -1.84
PDE1C-208ENST00000478736 NANOS1Q8WY41 292 aaKnown RBP3.58□□□□□ -1.84
PDE1C-208ENST00000478736 L3MBTL2Q969R5 705 aa3.58□□□□□ -1.84
PDE1C-208ENST00000478736 CNTNAP3BQ96NU0 1288 aa3.58□□□□□ -1.84
PDE1C-208ENST00000478736 HINFPQ9BQA5 517 aa3.58□□□□□ -1.84
PDE1C-208ENST00000478736 CNTNAP3Q9BZ76 1288 aa3.58□□□□□ -1.84
PDE1C-208ENST00000478736 DYRK1BQ9Y463 629 aa3.58□□□□□ -1.84
PDE1C-208ENST00000478736 ATAD2Q6PL18 1390 aa3.58□□□□□ -1.84
PDE1C-208ENST00000478736 C2CD2LO14523 706 aa3.57□□□□□ -1.84
PDE1C-208ENST00000478736 BNIP3LO60238 219 aa3.57□□□□□ -1.84
PDE1C-208ENST00000478736 PRMT3O60678 531 aa3.57□□□□□ -1.84
PDE1C-208ENST00000478736 F11P03951 625 aa3.57□□□□□ -1.84
PDE1C-208ENST00000478736 VSIG8P0DPA2 414 aa3.57□□□□□ -1.84
PDE1C-208ENST00000478736 FAM26DQ5JW98 314 aa3.57□□□□□ -1.84
PDE1C-208ENST00000478736 GNASQ5JWF2 1037 aa3.57□□□□□ -1.84
PDE1C-208ENST00000478736 TRIM22Q8IYM9 498 aa3.57□□□□□ -1.84
PDE1C-208ENST00000478736 ZNF280CQ8ND82 737 aa3.57□□□□□ -1.84
PDE1C-208ENST00000478736 CCDC97Q96F63 343 aaPredicted RBP3.57□□□□□ -1.84
PDE1C-208ENST00000478736 NGLY1Q96IV0 654 aa3.57□□□□□ -1.84
PDE1C-208ENST00000478736 ZIC5Q96T25 663 aa3.57□□□□□ -1.84
PDE1C-208ENST00000478736 NIFKQ9BYG3 293 aaKnown RBP3.57□□□□□ -1.84
PDE1C-208ENST00000478736 STRN4Q9NRL3 753 aa3.57□□□□□ -1.84
PDE1C-208ENST00000478736 A0A1W2PNR3 127 aa3.56□□□□□ -1.84
PDE1C-208ENST00000478736 BACH1O14867 736 aa3.56□□□□□ -1.84
PDE1C-208ENST00000478736 WEE1P30291 646 aa3.56□□□□□ -1.84
PDE1C-208ENST00000478736 CTBSQ01459 385 aa3.56□□□□□ -1.84
PDE1C-208ENST00000478736 FKBP5Q13451 457 aaPredicted RBP3.56□□□□□ -1.84
PDE1C-208ENST00000478736 TEAD4Q15561 434 aa3.56□□□□□ -1.84
PDE1C-208ENST00000478736 FAM200AQ8TCP9 573 aa3.56□□□□□ -1.84
PDE1C-208ENST00000478736 SLC16A10Q8TF71 515 aa3.56□□□□□ -1.84
PDE1C-208ENST00000478736 IRF7Q92985 503 aa3.56□□□□□ -1.84
PDE1C-208ENST00000478736 PBXIP1Q96AQ6 731 aa3.56□□□□□ -1.84
PDE1C-208ENST00000478736 ABHD17AQ96GS6 310 aa3.56□□□□□ -1.84
PDE1C-208ENST00000478736 HSH2DQ96JZ2 352 aa3.56□□□□□ -1.84
PDE1C-208ENST00000478736 C2orf49Q9BVC5 232 aaPredicted RBP3.56□□□□□ -1.84
PDE1C-208ENST00000478736 ZCCHC2Q9C0B9 1178 aaKnown RBP3.56□□□□□ -1.84
PDE1C-208ENST00000478736 SAP130Q9H0E3 1048 aa3.56□□□□□ -1.84
PDE1C-208ENST00000478736 SERPINA10Q9UK55 444 aa3.56□□□□□ -1.84
PDE1C-208ENST00000478736 LRFN2Q9ULH4 789 aa3.56□□□□□ -1.84
PDE1C-208ENST00000478736 ZNF232Q9UNY5 417 aa3.56□□□□□ -1.84
PDE1C-208ENST00000478736 BCS1LQ9Y276 419 aa3.56□□□□□ -1.84
PDE1C-208ENST00000478736 A0A1B0GTH6 734 aa3.55□□□□□ -1.84
PDE1C-208ENST00000478736 SERTM1A2A2V5 107 aa3.55□□□□□ -1.84
PDE1C-208ENST00000478736 TMEM88BA6NKF7 163 aa3.55□□□□□ -1.84
PDE1C-208ENST00000478736 BTBD11A6QL63 1104 aa3.55□□□□□ -1.84
PDE1C-208ENST00000478736 PPP1R12BO60237 982 aaPredicted RBP3.55□□□□□ -1.84
PDE1C-208ENST00000478736 ATG7O95352 703 aa3.55□□□□□ -1.84
PDE1C-208ENST00000478736 OCLNQ16625 522 aa3.55□□□□□ -1.84
PDE1C-208ENST00000478736 WDR44Q5JSH3 913 aa3.55□□□□□ -1.84
PDE1C-208ENST00000478736 LRRC69Q6ZNQ3 347 aa3.55□□□□□ -1.84
PDE1C-208ENST00000478736 C1orf229Q6ZS94 237 aaPredicted RBP3.55□□□□□ -1.84
PDE1C-208ENST00000478736 SV2AQ7L0J3 742 aa3.55□□□□□ -1.84
PDE1C-208ENST00000478736 NPAS3Q8IXF0 933 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms