RNA–Protein interactions for RNA: ENST00000478736.1

PDE1C-208, Transcript of phosphodiesterase 1C, humanhuman

TSL 3

Gene PDE1C, Length 495 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-208ENST00000478736 AEBP2Q6ZN18 517 aaPredicted RBP10.51□□□□□ -0.73
PDE1C-208ENST00000478736 CHIC1Q5VXU3 224 aa10.06□□□□□ -0.8
PDE1C-208ENST00000478736 POTEDQ86YR6 584 aa9.33□□□□□ -0.92
PDE1C-208ENST00000478736 SENP3Q9H4L4 574 aaPredicted RBP9.04□□□□□ -0.96
PDE1C-208ENST00000478736 PHF23Q9BUL5 403 aaPredicted RBP8.96□□□□□ -0.98
PDE1C-208ENST00000478736 FOXD1Q16676 465 aa8.55□□□□□ -1.04
PDE1C-208ENST00000478736 MSH5O43196 834 aa8.25□□□□□ -1.09
PDE1C-208ENST00000478736 PLPPR3Q6T4P5 718 aa8.08□□□□□ -1.12
PDE1C-208ENST00000478736 PPP6R1Q9UPN7 881 aa7.95□□□□□ -1.14
PDE1C-208ENST00000478736 ADRA2BP18089 450 aa7.91□□□□□ -1.14
PDE1C-208ENST00000478736 PIAS4Q8N2W9 510 aaPredicted RBP7.81□□□□□ -1.16
PDE1C-208ENST00000478736 CACNB1Q02641 598 aaPredicted RBP7.56□□□□□ -1.2
PDE1C-208ENST00000478736 MAPK8IP2Q13387 824 aaPredicted RBP7.22□□□□□ -1.25
PDE1C-208ENST00000478736 PPP4R3CPQ6ZMV5 832 aa7.2□□□□□ -1.26
PDE1C-208ENST00000478736 POTEHQ6S545 545 aa7.16□□□□□ -1.26
PDE1C-208ENST00000478736 KCNA4P22459 653 aa7.06□□□□□ -1.28
PDE1C-208ENST00000478736 DMRT2Q9Y5R5 561 aa7.06□□□□□ -1.28
PDE1C-208ENST00000478736 SCAF1Q9H7N4 1312 aaKnown RBP7.01□□□□□ -1.29
PDE1C-208ENST00000478736 RNF39Q9H2S5 420 aa6.98□□□□□ -1.29
PDE1C-208ENST00000478736 CNKSR2Q8WXI2 1034 aa6.93□□□□□ -1.3
PDE1C-208ENST00000478736 NPM3O75607 178 aaKnown RBP6.91□□□□□ -1.3
PDE1C-208ENST00000478736 NCBP3Q53F19 620 aaKnown RBP6.87□□□□□ -1.31
PDE1C-208ENST00000478736 DCAF8L1A6NGE4 600 aa6.86□□□□□ -1.31
PDE1C-208ENST00000478736 C1QBPQ07021 282 aaKnown RBP6.82□□□□□ -1.32
PDE1C-208ENST00000478736 HOXD11P31277 338 aaPredicted RBP6.81□□□□□ -1.32
PDE1C-208ENST00000478736 RNF216Q9NWF9 866 aaPredicted RBP6.8□□□□□ -1.32
PDE1C-208ENST00000478736 SLC4A1APQ9BWU0 796 aaKnown RBP6.63□□□□□ -1.35
PDE1C-208ENST00000478736 SLC4A2P04920 1241 aa6.58□□□□□ -1.36
PDE1C-208ENST00000478736 DNAJC5BQ9UF47 199 aa6.57□□□□□ -1.36
PDE1C-208ENST00000478736 ZBTB22O15209 634 aa6.54□□□□□ -1.36
PDE1C-208ENST00000478736 EHMT2Q96KQ7 1210 aa6.48□□□□□ -1.37
PDE1C-208ENST00000478736 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.48□□□□□ -1.37
PDE1C-208ENST00000478736 CSRNP3Q8WYN3 585 aa6.44□□□□□ -1.38
PDE1C-208ENST00000478736 U3KPZ7 1027 aaPredicted RBP6.44□□□□□ -1.38
PDE1C-208ENST00000478736 FOXD4L1Q9NU39 408 aa6.39□□□□□ -1.39
PDE1C-208ENST00000478736 SP7Q8TDD2 431 aaPredicted RBP6.37□□□□□ -1.39
PDE1C-208ENST00000478736 SPINK5Q9NQ38 1064 aaPredicted RBP6.32□□□□□ -1.4
PDE1C-208ENST00000478736 ATF5Q9Y2D1 282 aaPredicted RBP6.32□□□□□ -1.4
PDE1C-208ENST00000478736 DSG3P32926 999 aa6.3□□□□□ -1.4
PDE1C-208ENST00000478736 MYCNP04198 464 aaPredicted RBP6.29□□□□□ -1.4
PDE1C-208ENST00000478736 PLSCR2Q9NRY7 297 aa6.25□□□□□ -1.41
PDE1C-208ENST00000478736 CAPN15O75808 1086 aa6.21□□□□□ -1.42
PDE1C-208ENST00000478736 TRHP20396 242 aaPredicted RBP6.2□□□□□ -1.42
PDE1C-208ENST00000478736 CHRDL2Q6WN34 429 aa6.19□□□□□ -1.42
PDE1C-208ENST00000478736 SAMD1Q6SPF0 538 aaPredicted RBP6.17□□□□□ -1.42
PDE1C-208ENST00000478736 ABCB7O75027 752 aa6.16□□□□□ -1.42
PDE1C-208ENST00000478736 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.15□□□□□ -1.42
PDE1C-208ENST00000478736 HNRNPUL2Q1KMD3 747 aaKnown RBP6.15□□□□□ -1.42
PDE1C-208ENST00000478736 ATXN8OSP0DMR3 200 aa6.1□□□□□ -1.43
PDE1C-208ENST00000478736 ZNF219Q9P2Y4 722 aaPredicted RBP6.1□□□□□ -1.43
PDE1C-208ENST00000478736 POLA2Q14181 598 aa6.09□□□□□ -1.43
PDE1C-208ENST00000478736 APLP2Q06481 763 aa6.04□□□□□ -1.44
PDE1C-208ENST00000478736 RBM42Q9BTD8 480 aaKnown RBP6.01□□□□□ -1.45
PDE1C-208ENST00000478736 HAX1O00165 279 aa6□□□□□ -1.45
PDE1C-208ENST00000478736 MKRN4PQ13434 485 aaPredicted RBP6□□□□□ -1.45
PDE1C-208ENST00000478736 LHX8Q68G74 356 aa5.97□□□□□ -1.45
PDE1C-208ENST00000478736 OSCARQ8IYS5 282 aa5.89□□□□□ -1.47
PDE1C-208ENST00000478736 PIP4P2Q8N4L2 257 aa5.89□□□□□ -1.47
PDE1C-208ENST00000478736 EVX2Q03828 476 aa5.88□□□□□ -1.47
PDE1C-208ENST00000478736 FBLN2P98095 1184 aa5.83□□□□□ -1.48
PDE1C-208ENST00000478736 ZBTB12Q9Y330 459 aaPredicted RBP5.81□□□□□ -1.48
PDE1C-208ENST00000478736 FKBP8Q14318 412 aa5.77□□□□□ -1.49
PDE1C-208ENST00000478736 SPDYE4A6NLX3 237 aa5.76□□□□□ -1.49
PDE1C-208ENST00000478736 ZNF692Q9BU19 519 aaPredicted RBP5.75□□□□□ -1.49
PDE1C-208ENST00000478736 SPDYE2BA6NHP3 402 aa5.73□□□□□ -1.49
PDE1C-208ENST00000478736 SPDYE6P0CI01 402 aa5.73□□□□□ -1.49
PDE1C-208ENST00000478736 FXR2P51116 673 aaKnown RBP eCLIP5.73□□□□□ -1.49
PDE1C-208ENST00000478736 SPDYE2Q495Y8 402 aa5.73□□□□□ -1.49
PDE1C-208ENST00000478736 SSUH2Q9Y2M2 353 aa5.73□□□□□ -1.49
PDE1C-208ENST00000478736 AKT1S1Q96B36 256 aa5.72□□□□□ -1.49
PDE1C-208ENST00000478736 PABPN1Q86U42 306 aaKnown RBP eCLIP5.71□□□□□ -1.5
PDE1C-208ENST00000478736 REM2Q8IYK8 340 aaPredicted RBP5.71□□□□□ -1.5
PDE1C-208ENST00000478736 GABBR2O75899 941 aa5.69□□□□□ -1.5
PDE1C-208ENST00000478736 POTEMA6NI47 508 aa5.67□□□□□ -1.5
PDE1C-208ENST00000478736 PITPNM1O00562 1244 aa5.65□□□□□ -1.5
PDE1C-208ENST00000478736 PROM2Q8N271 834 aa5.65□□□□□ -1.5
PDE1C-208ENST00000478736 CLEC11AQ9Y240 323 aa5.63□□□□□ -1.51
PDE1C-208ENST00000478736 POTEGQ6S5H5 508 aa5.62□□□□□ -1.51
PDE1C-208ENST00000478736 C19orf67A6NJJ6 358 aa5.57□□□□□ -1.52
PDE1C-208ENST00000478736 PCDH10Q9P2E7 1040 aa5.57□□□□□ -1.52
PDE1C-208ENST00000478736 POTEIP0CG38 1075 aa5.56□□□□□ -1.52
PDE1C-208ENST00000478736 CHADLQ6NUI6 762 aa5.56□□□□□ -1.52
PDE1C-208ENST00000478736 SPDYE1Q8NFV5 336 aaPredicted RBP5.56□□□□□ -1.52
PDE1C-208ENST00000478736 PRR29P0C7W0 189 aa5.52□□□□□ -1.53
PDE1C-208ENST00000478736 CREBZFQ9NS37 354 aa5.51□□□□□ -1.53
PDE1C-208ENST00000478736 OTUD5Q96G74 571 aa5.5□□□□□ -1.53
PDE1C-208ENST00000478736 PRKAR2AP13861 404 aaKnown RBP5.49□□□□□ -1.53
PDE1C-208ENST00000478736 MNX1P50219 401 aaPredicted RBP5.47□□□□□ -1.53
PDE1C-208ENST00000478736 MIER1Q8N108 512 aa5.47□□□□□ -1.53
PDE1C-208ENST00000478736 VASPP50552 380 aaPredicted RBP5.46□□□□□ -1.54
PDE1C-208ENST00000478736 IFNLR1Q8IU57 520 aaPredicted RBP5.46□□□□□ -1.54
PDE1C-208ENST00000478736 STAG3Q9UJ98 1225 aa5.46□□□□□ -1.54
PDE1C-208ENST00000478736 PLCD3Q8N3E9 789 aa5.42□□□□□ -1.54
PDE1C-208ENST00000478736 FBXO3Q9UK99 471 aa5.42□□□□□ -1.54
PDE1C-208ENST00000478736 FARP1Q9Y4F1 1045 aaPredicted RBP5.42□□□□□ -1.54
PDE1C-208ENST00000478736 DCBLD2Q96PD2 775 aa5.38□□□□□ -1.55
PDE1C-208ENST00000478736 POTEB2H3BUK9 544 aa5.37□□□□□ -1.55
PDE1C-208ENST00000478736 NUBP1P53384 320 aa5.37□□□□□ -1.55
PDE1C-208ENST00000478736 RASEFQ8IZ41 740 aa5.37□□□□□ -1.55
PDE1C-208ENST00000478736 KLHL34Q8N239 644 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms