RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 GRIP2Q9C0E4 1043 aa12.13□□□□□ -0.47
A1CF-209ENST00000473480 TFIP11Q9UBB9 837 aaKnown RBP12.13□□□□□ -0.47
A1CF-209ENST00000473480 UBAP1LF5GYI3 381 aa12.12□□□□□ -0.47
A1CF-209ENST00000473480 GDF10P55107 478 aa12.12□□□□□ -0.47
A1CF-209ENST00000473480 GTF2IP78347 998 aa12.12□□□□□ -0.47
A1CF-209ENST00000473480 CENPCQ03188 943 aa12.12□□□□□ -0.47
A1CF-209ENST00000473480 TRIM50Q86XT4 487 aa12.12□□□□□ -0.47
A1CF-209ENST00000473480 PCDHGA11Q9Y5H2 935 aa12.12□□□□□ -0.47
A1CF-209ENST00000473480 HRH3Q9Y5N1 445 aa12.12□□□□□ -0.47
A1CF-209ENST00000473480 CARMIL2Q6F5E8 1435 aa12.11□□□□□ -0.47
A1CF-209ENST00000473480 CFAP43Q8NDM7 1665 aa12.11□□□□□ -0.47
A1CF-209ENST00000473480 PALM3A6NDB9 673 aaPredicted RBP12.11□□□□□ -0.47
A1CF-209ENST00000473480 H3BM21 787 aa12.11□□□□□ -0.47
A1CF-209ENST00000473480 SCNN1DP51172 638 aa12.11□□□□□ -0.47
A1CF-209ENST00000473480 PPP1R12CQ9BZL4 782 aa12.11□□□□□ -0.47
A1CF-209ENST00000473480 STRCQ7RTU9 1775 aa12.1□□□□□ -0.47
A1CF-209ENST00000473480 WDR7Q9Y4E6 1490 aa12.1□□□□□ -0.47
A1CF-209ENST00000473480 WASLO00401 505 aaPredicted RBP12.1□□□□□ -0.47
A1CF-209ENST00000473480 PPFIA3O75145 1194 aa12.1□□□□□ -0.47
A1CF-209ENST00000473480 STAU1O95793 577 aaKnown RBP12.1□□□□□ -0.47
A1CF-209ENST00000473480 INHAP05111 366 aa12.1□□□□□ -0.47
A1CF-209ENST00000473480 VEGFBP49765 207 aa12.1□□□□□ -0.47
A1CF-209ENST00000473480 MAFBQ9Y5Q3 323 aaPredicted RBP12.1□□□□□ -0.47
A1CF-209ENST00000473480 ZCCHC11Q5TAX3 1644 aaKnown RBP12.09□□□□□ -0.47
A1CF-209ENST00000473480 SLC35F4A4IF30 521 aa12.09□□□□□ -0.47
A1CF-209ENST00000473480 GTF2E1P29083 439 aaPredicted RBP12.09□□□□□ -0.47
A1CF-209ENST00000473480 PSME1Q06323 249 aa12.09□□□□□ -0.47
A1CF-209ENST00000473480 CCDC155Q8N6L0 562 aa12.09□□□□□ -0.47
A1CF-209ENST00000473480 ZSCAN10Q96SZ4 725 aaPredicted RBP12.09□□□□□ -0.47
A1CF-209ENST00000473480 LTBP4Q8N2S1 1624 aa12.08□□□□□ -0.48
A1CF-209ENST00000473480 ATP1A2P50993 1020 aa12.08□□□□□ -0.48
A1CF-209ENST00000473480 MKRN1Q9UHC7 482 aaKnown RBP12.08□□□□□ -0.48
A1CF-209ENST00000473480 PTPRTO14522 1441 aa12.08□□□□□ -0.48
A1CF-209ENST00000473480 SPATA31C2B4DYI2 1134 aa12.07□□□□□ -0.48
A1CF-209ENST00000473480 RHOQP17081 205 aa12.07□□□□□ -0.48
A1CF-209ENST00000473480 POU4F2Q12837 409 aa12.07□□□□□ -0.48
A1CF-209ENST00000473480 TLR1Q15399 786 aa12.07□□□□□ -0.48
A1CF-209ENST00000473480 WDR44Q5JSH3 913 aa12.07□□□□□ -0.48
A1CF-209ENST00000473480 IRF7Q92985 503 aa12.07□□□□□ -0.48
A1CF-209ENST00000473480 FHDC1Q9C0D6 1143 aaPredicted RBP12.07□□□□□ -0.48
A1CF-209ENST00000473480 SENP3-EIF4A1A0A087X0R7 540 aa12.06□□□□□ -0.48
A1CF-209ENST00000473480 TMEM229AB2RXF0 380 aa12.06□□□□□ -0.48
A1CF-209ENST00000473480 LCE2AQ5TA79 106 aaPredicted RBP12.06□□□□□ -0.48
A1CF-209ENST00000473480 TMEM214Q6NUQ4 689 aaKnown RBP12.06□□□□□ -0.48
A1CF-209ENST00000473480 NBPF10Q6P3W6 841 aaKnown RBP12.06□□□□□ -0.48
A1CF-209ENST00000473480 TAS1R3Q7RTX0 852 aa12.06□□□□□ -0.48
A1CF-209ENST00000473480 C14orf37Q86TY3 774 aa12.06□□□□□ -0.48
A1CF-209ENST00000473480 NBPF15Q8N660 670 aa12.06□□□□□ -0.48
A1CF-209ENST00000473480 GNASQ5JWF2 1037 aa12.05□□□□□ -0.48
A1CF-209ENST00000473480 PREX1Q8TCU6 1659 aa12.04□□□□□ -0.48
A1CF-209ENST00000473480 RAPGEF3O95398 923 aa12.04□□□□□ -0.48
A1CF-209ENST00000473480 OGFOD1Q8N543 542 aa12.04□□□□□ -0.48
A1CF-209ENST00000473480 SLC4A9Q96Q91 983 aa12.04□□□□□ -0.48
A1CF-209ENST00000473480 DNAAF2Q9NVR5 837 aaKnown RBP12.04□□□□□ -0.48
A1CF-209ENST00000473480 SERTAD1Q9UHV2 236 aa12.04□□□□□ -0.48
A1CF-209ENST00000473480 PHLDB1Q86UU1 1377 aa12.04□□□□□ -0.48
A1CF-209ENST00000473480 POGZQ7Z3K3 1410 aa12.03□□□□□ -0.48
A1CF-209ENST00000473480 BACH1O14867 736 aa12.03□□□□□ -0.48
A1CF-209ENST00000473480 LMOD1P29536 600 aaPredicted RBP12.03□□□□□ -0.48
A1CF-209ENST00000473480 HSPA1LP34931 641 aa12.03□□□□□ -0.48
A1CF-209ENST00000473480 SMTNP53814 917 aa12.03□□□□□ -0.48
A1CF-209ENST00000473480 CLDN10P78369 228 aa12.03□□□□□ -0.48
A1CF-209ENST00000473480 VSIG8P0DPA2 414 aa12.02□□□□□ -0.49
A1CF-209ENST00000473480 ITGA6P23229 1130 aa12.02□□□□□ -0.49
A1CF-209ENST00000473480 PPARGC1BQ86YN6 1023 aaKnown RBP12.02□□□□□ -0.49
A1CF-209ENST00000473480 LARGE2Q8N3Y3 721 aa12.02□□□□□ -0.49
A1CF-209ENST00000473480 DYRK1BQ9Y463 629 aa12.02□□□□□ -0.49
A1CF-209ENST00000473480 ZBTB7BO15156 539 aaPredicted RBP12.01□□□□□ -0.49
A1CF-209ENST00000473480 CCDC102BQ68D86 513 aa12.01□□□□□ -0.49
A1CF-209ENST00000473480 TPCN2Q8NHX9 752 aa12.01□□□□□ -0.49
A1CF-209ENST00000473480 RHBDD1Q8TEB9 315 aa12.01□□□□□ -0.49
A1CF-209ENST00000473480 TIMMDC1Q9NPL8 285 aa12.01□□□□□ -0.49
A1CF-209ENST00000473480 ZNF358Q9NW07 568 aa12.01□□□□□ -0.49
A1CF-209ENST00000473480 RASA1P20936 1047 aa12□□□□□ -0.49
A1CF-209ENST00000473480 SERBP1Q8NC51 408 aaKnown RBP eCLIP12□□□□□ -0.49
A1CF-209ENST00000473480 KIAA1024Q9UPX6 916 aa12□□□□□ -0.49
A1CF-209ENST00000473480 RBM19Q9Y4C8 960 aaKnown RBP12□□□□□ -0.49
A1CF-209ENST00000473480 ERBB4Q15303 1308 aa12□□□□□ -0.49
A1CF-209ENST00000473480 A6NJY4 79 aa11.99□□□□□ -0.49
A1CF-209ENST00000473480 MTFR1Q15390 333 aa11.99□□□□□ -0.49
A1CF-209ENST00000473480 CFAP70Q5T0N1 1121 aa11.99□□□□□ -0.49
A1CF-209ENST00000473480 LCE2CQ5TA81 110 aa11.99□□□□□ -0.49
A1CF-209ENST00000473480 ERICH6Q7L0X2 663 aa11.99□□□□□ -0.49
A1CF-209ENST00000473480 SIX5Q8N196 739 aa11.99□□□□□ -0.49
A1CF-209ENST00000473480 NANOS1Q8WY41 292 aaKnown RBP11.99□□□□□ -0.49
A1CF-209ENST00000473480 VRTNQ9H8Y1 702 aa11.99□□□□□ -0.49
A1CF-209ENST00000473480 C4orf17Q53FE4 359 aa11.98□□□□□ -0.49
A1CF-209ENST00000473480 KANK4Q5T7N3 995 aaPredicted RBP11.98□□□□□ -0.49
A1CF-209ENST00000473480 LARP1Q6PKG0 1096 aaKnown RBP11.98□□□□□ -0.49
A1CF-209ENST00000473480 ZNF594Q96JF6 807 aaPredicted RBP11.98□□□□□ -0.49
A1CF-209ENST00000473480 CDK2AP1O14519 115 aa11.97□□□□□ -0.49
A1CF-209ENST00000473480 PHKA2P46019 1235 aa11.97□□□□□ -0.49
A1CF-209ENST00000473480 UHRF1BP1Q6BDS2 1440 aa11.96□□□□□ -0.49
A1CF-209ENST00000473480 GAS2L1Q99501 681 aaPredicted RBP11.96□□□□□ -0.49
A1CF-209ENST00000473480 NIFKQ9BYG3 293 aaKnown RBP11.96□□□□□ -0.49
A1CF-209ENST00000473480 TTC37Q6PGP7 1564 aa11.96□□□□□ -0.5
A1CF-209ENST00000473480 FANCAO15360 1455 aa11.95□□□□□ -0.5
A1CF-209ENST00000473480 A0A1B0GTH6 734 aa11.95□□□□□ -0.5
A1CF-209ENST00000473480 CDC14CA4D256 554 aa11.95□□□□□ -0.5
A1CF-209ENST00000473480 GMPRP36959 345 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms