RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 NOS2P35228 1153 aa10.01□□□□□ -0.81
HDAC9-221ENST00000471887 VEGFBP49765 207 aa10.01□□□□□ -0.81
HDAC9-221ENST00000471887 NBPF1Q3BBV0 1214 aa10.01□□□□□ -0.81
HDAC9-221ENST00000471887 SERTM1A2A2V5 107 aa10□□□□□ -0.81
HDAC9-221ENST00000471887 C21orf2O43822 256 aa10□□□□□ -0.81
HDAC9-221ENST00000471887 PPP1R12BO60237 982 aaPredicted RBP10□□□□□ -0.81
HDAC9-221ENST00000471887 F11P03951 625 aa10□□□□□ -0.81
HDAC9-221ENST00000471887 ITGA6P23229 1130 aa10□□□□□ -0.81
HDAC9-221ENST00000471887 SLC16A10Q8TF71 515 aa10□□□□□ -0.81
HDAC9-221ENST00000471887 L3MBTL2Q969R5 705 aa10□□□□□ -0.81
HDAC9-221ENST00000471887 AIDAQ96BJ3 306 aa10□□□□□ -0.81
HDAC9-221ENST00000471887 ZNF775Q96BV0 537 aaPredicted RBP10□□□□□ -0.81
HDAC9-221ENST00000471887 ZNF232Q9UNY5 417 aa10□□□□□ -0.81
HDAC9-221ENST00000471887 PARP3Q9Y6F1 533 aa10□□□□□ -0.81
HDAC9-221ENST00000471887 H3BM21 787 aa9.99□□□□□ -0.81
HDAC9-221ENST00000471887 IGFBP4P22692 258 aa9.99□□□□□ -0.81
HDAC9-221ENST00000471887 FAM69CQ0P6D2 419 aa9.99□□□□□ -0.81
HDAC9-221ENST00000471887 RIPOR1Q6ZS17 1223 aa9.99□□□□□ -0.81
HDAC9-221ENST00000471887 C1orf216Q8TAB5 229 aa9.99□□□□□ -0.81
HDAC9-221ENST00000471887 ZDHHC1Q8WTX9 485 aa9.99□□□□□ -0.81
HDAC9-221ENST00000471887 TATP17735 454 aaPredicted RBP9.98□□□□□ -0.81
HDAC9-221ENST00000471887 MSX1P28360 303 aa9.98□□□□□ -0.81
HDAC9-221ENST00000471887 WEE1P30291 646 aa9.98□□□□□ -0.81
HDAC9-221ENST00000471887 STAG2Q8N3U4 1231 aa9.98□□□□□ -0.81
HDAC9-221ENST00000471887 CHMP7Q8WUX9 453 aaPredicted RBP9.98□□□□□ -0.81
HDAC9-221ENST00000471887 GPAMQ9HCL2 828 aa9.98□□□□□ -0.81
HDAC9-221ENST00000471887 ZDHHC3Q9NYG2 299 aa9.98□□□□□ -0.81
HDAC9-221ENST00000471887 H7C1W4 665 aa9.97□□□□□ -0.81
HDAC9-221ENST00000471887 EML1O00423 815 aa9.97□□□□□ -0.81
HDAC9-221ENST00000471887 PGBD3Q8N328 593 aa9.97□□□□□ -0.81
HDAC9-221ENST00000471887 PRMT3O60678 531 aa9.96□□□□□ -0.82
HDAC9-221ENST00000471887 HIRAP54198 1017 aaPredicted RBP9.96□□□□□ -0.82
HDAC9-221ENST00000471887 NFX1Q12986 1120 aaKnown RBP9.96□□□□□ -0.82
HDAC9-221ENST00000471887 POTEAQ6S8J7 498 aa9.96□□□□□ -0.82
HDAC9-221ENST00000471887 CLP1Q92989 425 aaKnown RBP9.96□□□□□ -0.82
HDAC9-221ENST00000471887 GMCL1Q96IK5 515 aa9.96□□□□□ -0.82
HDAC9-221ENST00000471887 C2orf49Q9BVC5 232 aaPredicted RBP9.96□□□□□ -0.82
HDAC9-221ENST00000471887 FOXO3O43524 673 aa9.95□□□□□ -0.82
HDAC9-221ENST00000471887 SH3PXD2AQ5TCZ1 1133 aa9.95□□□□□ -0.82
HDAC9-221ENST00000471887 TRIM22Q8IYM9 498 aa9.95□□□□□ -0.82
HDAC9-221ENST00000471887 NANOS1Q8WY41 292 aaKnown RBP9.95□□□□□ -0.82
HDAC9-221ENST00000471887 PRIMPOLQ96LW4 560 aa9.95□□□□□ -0.82
HDAC9-221ENST00000471887 CDC14CA4D256 554 aa9.94□□□□□ -0.82
HDAC9-221ENST00000471887 TMEM88BA6NKF7 163 aa9.94□□□□□ -0.82
HDAC9-221ENST00000471887 ATP4AP20648 1035 aa9.94□□□□□ -0.82
HDAC9-221ENST00000471887 TXLNAP40222 546 aa9.94□□□□□ -0.82
HDAC9-221ENST00000471887 LBRQ14739 615 aaKnown RBP9.94□□□□□ -0.82
HDAC9-221ENST00000471887 IRF7Q92985 503 aa9.94□□□□□ -0.82
HDAC9-221ENST00000471887 RUBCNLQ9H714 662 aa9.94□□□□□ -0.82
HDAC9-221ENST00000471887 CUEDC1Q9NWM3 386 aaPredicted RBP9.94□□□□□ -0.82
HDAC9-221ENST00000471887 USTQ9Y2C2 406 aa9.94□□□□□ -0.82
HDAC9-221ENST00000471887 WFS1O76024 890 aa9.93□□□□□ -0.82
HDAC9-221ENST00000471887 OCLNQ16625 522 aa9.93□□□□□ -0.82
HDAC9-221ENST00000471887 ARSJQ5FYB0 599 aaPredicted RBP9.93□□□□□ -0.82
HDAC9-221ENST00000471887 EFHC2Q5JST6 749 aa9.93□□□□□ -0.82
HDAC9-221ENST00000471887 SV2AQ7L0J3 742 aa9.93□□□□□ -0.82
HDAC9-221ENST00000471887 VTI1AQ96AJ9 217 aa9.93□□□□□ -0.82
HDAC9-221ENST00000471887 ZNF837Q96EG3 531 aaPredicted RBP9.93□□□□□ -0.82
HDAC9-221ENST00000471887 NUCKS1Q9H1E3 243 aaKnown RBP9.93□□□□□ -0.82
HDAC9-221ENST00000471887 CRISPLD1Q9H336 500 aa9.93□□□□□ -0.82
HDAC9-221ENST00000471887 HCN4Q9Y3Q4 1203 aa9.93□□□□□ -0.82
HDAC9-221ENST00000471887 VSIG8P0DPA2 414 aa9.92□□□□□ -0.82
HDAC9-221ENST00000471887 DBN1Q16643 649 aa9.92□□□□□ -0.82
HDAC9-221ENST00000471887 C1orf53Q5VUE5 145 aa9.92□□□□□ -0.82
HDAC9-221ENST00000471887 BICDL1Q6ZP65 573 aa9.92□□□□□ -0.82
HDAC9-221ENST00000471887 VWA5B2Q8N398 1253 aa9.92□□□□□ -0.82
HDAC9-221ENST00000471887 PHACTR1Q9C0D0 580 aa9.92□□□□□ -0.82
HDAC9-221ENST00000471887 CXXC1Q9P0U4 656 aaPredicted RBP9.92□□□□□ -0.82
HDAC9-221ENST00000471887 PDE4CQ08493 712 aa9.91□□□□□ -0.82
HDAC9-221ENST00000471887 TREML4Q6UXN2 200 aa9.91□□□□□ -0.82
HDAC9-221ENST00000471887 ALDH16A1Q8IZ83 802 aa9.91□□□□□ -0.82
HDAC9-221ENST00000471887 RETREG2Q8NC44 543 aa9.91□□□□□ -0.82
HDAC9-221ENST00000471887 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.91□□□□□ -0.82
HDAC9-221ENST00000471887 GPC6Q9Y625 555 aaPredicted RBP9.91□□□□□ -0.82
HDAC9-221ENST00000471887 ATP2B4P23634 1241 aa9.9□□□□□ -0.82
HDAC9-221ENST00000471887 FKBP5Q13451 457 aaPredicted RBP9.9□□□□□ -0.82
HDAC9-221ENST00000471887 FOXR1Q6PIV2 292 aa9.9□□□□□ -0.82
HDAC9-221ENST00000471887 RHPN1Q8TCX5 695 aa9.9□□□□□ -0.82
HDAC9-221ENST00000471887 ERBB4Q15303 1308 aa9.89□□□□□ -0.83
HDAC9-221ENST00000471887 A0A1W2PNR3 127 aa9.89□□□□□ -0.83
HDAC9-221ENST00000471887 NGLY1Q96IV0 654 aa9.89□□□□□ -0.83
HDAC9-221ENST00000471887 ZIC5Q96T25 663 aa9.89□□□□□ -0.83
HDAC9-221ENST00000471887 SLAIN2Q9P270 581 aa9.89□□□□□ -0.83
HDAC9-221ENST00000471887 GJA3Q9Y6H8 435 aa9.89□□□□□ -0.83
HDAC9-221ENST00000471887 CARNS1A5YM72 827 aa9.88□□□□□ -0.83
HDAC9-221ENST00000471887 NLRP8Q86W28 1048 aa9.88□□□□□ -0.83
HDAC9-221ENST00000471887 GTPBP3Q969Y2 492 aaKnown RBP9.88□□□□□ -0.83
HDAC9-221ENST00000471887 THBS1P07996 1170 aa9.87□□□□□ -0.83
HDAC9-221ENST00000471887 RTN1Q16799 776 aa9.87□□□□□ -0.83
HDAC9-221ENST00000471887 FIGNL1Q6PIW4 674 aa9.87□□□□□ -0.83
HDAC9-221ENST00000471887 TRERF1Q96PN7 1200 aa9.87□□□□□ -0.83
HDAC9-221ENST00000471887 NEUROD4Q9HD90 331 aa9.87□□□□□ -0.83
HDAC9-221ENST00000471887 PTCD1O75127 700 aaKnown RBP9.86□□□□□ -0.83
HDAC9-221ENST00000471887 HIF1AQ16665 826 aa9.86□□□□□ -0.83
HDAC9-221ENST00000471887 C7orf43Q8WVR3 580 aa9.86□□□□□ -0.83
HDAC9-221ENST00000471887 COL26A1Q96A83 441 aa9.86□□□□□ -0.83
HDAC9-221ENST00000471887 SSFA2P28290 1259 aa9.85□□□□□ -0.83
HDAC9-221ENST00000471887 GPR161Q8N6U8 529 aaKnown RBP9.85□□□□□ -0.83
HDAC9-221ENST00000471887 MKNK1Q9BUB5 465 aa9.85□□□□□ -0.83
HDAC9-221ENST00000471887 ANKIB1Q9P2G1 1089 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms