RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 SOS1Q07889 1333 aaPredicted RBP34.09■■■■□ 3.05
PDCD4-205ENST00000467574 PRAMEF22A3QJZ6 481 aa34.09■■■■□ 3.05
PDCD4-205ENST00000467574 TEX13AQ9BXU3 409 aaPredicted RBP34.08■■■■□ 3.05
PDCD4-205ENST00000467574 STARD3NLO95772 234 aa34.07■■■■□ 3.04
PDCD4-205ENST00000467574 EIF4A1P60842 406 aaKnown RBP34.07■■■■□ 3.04
PDCD4-205ENST00000467574 TRAPPC3LQ5T215 181 aa34.07■■■■□ 3.04
PDCD4-205ENST00000467574 ARHGEF1Q92888 912 aaKnown RBP34.07■■■■□ 3.04
PDCD4-205ENST00000467574 BABAM1Q9NWV8 329 aa34.07■■■■□ 3.04
PDCD4-205ENST00000467574 SNRPA1P09661 255 aaKnown RBP34.06■■■■□ 3.04
PDCD4-205ENST00000467574 MSL1Q68DK7 614 aa34.06■■■■□ 3.04
PDCD4-205ENST00000467574 TSPYL4Q9UJ04 414 aa34.06■■■■□ 3.04
PDCD4-205ENST00000467574 USP16Q9Y5T5 823 aa34.05■■■■□ 3.04
PDCD4-205ENST00000467574 COL15A1P39059 1388 aa34.03■■■■□ 3.04
PDCD4-205ENST00000467574 DIEXFQ68CQ4 756 aaKnown RBP34.03■■■■□ 3.04
PDCD4-205ENST00000467574 FAM9BQ8IZU0 186 aa34.03■■■■□ 3.04
PDCD4-205ENST00000467574 CHL1O00533 1208 aa34.02■■■■□ 3.04
PDCD4-205ENST00000467574 SENP3-EIF4A1A0A087X0R7 540 aa34.01■■■■□ 3.03
PDCD4-205ENST00000467574 GIGYF1O75420 1035 aaPredicted RBP34.01■■■■□ 3.03
PDCD4-205ENST00000467574 CCER2I3L3R5 266 aa34■■■■□ 3.03
PDCD4-205ENST00000467574 SCN7AQ01118 1682 aa33.99■■■■□ 3.03
PDCD4-205ENST00000467574 A1BGP04217 495 aa33.99■■■■□ 3.03
PDCD4-205ENST00000467574 CANXP27824 592 aaKnown RBP33.99■■■■□ 3.03
PDCD4-205ENST00000467574 RFC4P35249 363 aa33.99■■■■□ 3.03
PDCD4-205ENST00000467574 EIF5P55010 431 aaKnown RBP33.99■■■■□ 3.03
PDCD4-205ENST00000467574 PPP1R1BQ9UD71 204 aaPredicted RBP33.99■■■■□ 3.03
PDCD4-205ENST00000467574 USP42Q9H9J4 1324 aaKnown RBP33.99■■■■□ 3.03
PDCD4-205ENST00000467574 CCDC27Q2M243 656 aa33.98■■■■□ 3.03
PDCD4-205ENST00000467574 ZNF853P0CG23 659 aa33.97■■■■□ 3.03
PDCD4-205ENST00000467574 GYS1P13807 737 aa33.97■■■■□ 3.03
PDCD4-205ENST00000467574 POLD1P28340 1107 aa33.97■■■■□ 3.03
PDCD4-205ENST00000467574 NCBP3Q53F19 620 aaKnown RBP33.97■■■■□ 3.03
PDCD4-205ENST00000467574 CFAP44Q96MT7 982 aa33.97■■■■□ 3.03
PDCD4-205ENST00000467574 ARXQ96QS3 562 aa33.97■■■■□ 3.03
PDCD4-205ENST00000467574 SRP68Q9UHB9 627 aaKnown RBP33.97■■■■□ 3.03
PDCD4-205ENST00000467574 BCORQ6W2J9 1755 aa33.96■■■■□ 3.03
PDCD4-205ENST00000467574 IL6STP40189 918 aaPredicted RBP33.94■■■■□ 3.02
PDCD4-205ENST00000467574 LAS1LQ9Y4W2 734 aaKnown RBP33.94■■■■□ 3.02
PDCD4-205ENST00000467574 WWC1Q8IX03 1113 aa33.93■■■■□ 3.02
PDCD4-205ENST00000467574 IFT57Q9NWB7 429 aa33.93■■■■□ 3.02
PDCD4-205ENST00000467574 NBPF26B4DH59 902 aa33.92■■■■□ 3.02
PDCD4-205ENST00000467574 PIP4K2AP48426 406 aaPredicted RBP33.92■■■■□ 3.02
PDCD4-205ENST00000467574 CALD1Q05682 793 aaKnown RBP33.92■■■■□ 3.02
PDCD4-205ENST00000467574 NBPF10Q6P3W6 841 aaKnown RBP33.92■■■■□ 3.02
PDCD4-205ENST00000467574 NBPF15Q8N660 670 aa33.92■■■■□ 3.02
PDCD4-205ENST00000467574 MBIPQ9NS73 344 aa33.91■■■■□ 3.02
PDCD4-205ENST00000467574 NARFQ9UHQ1 456 aa33.91■■■■□ 3.02
PDCD4-205ENST00000467574 KRT24Q2M2I5 525 aa33.9■■■■□ 3.02
PDCD4-205ENST00000467574 NLGN1Q8N2Q7 840 aa33.89■■■■□ 3.02
PDCD4-205ENST00000467574 FHDC1Q9C0D6 1143 aaPredicted RBP33.89■■■■□ 3.02
PDCD4-205ENST00000467574 FKBP8Q14318 412 aa33.88■■■■□ 3.01
PDCD4-205ENST00000467574 USPL1Q5W0Q7 1092 aa33.88■■■■□ 3.01
PDCD4-205ENST00000467574 MIER1Q8N108 512 aa33.88■■■■□ 3.01
PDCD4-205ENST00000467574 BCL2L12Q9HB09 334 aa33.88■■■■□ 3.01
PDCD4-205ENST00000467574 GNAI1P63096 354 aa33.87■■■■□ 3.01
PDCD4-205ENST00000467574 KIF13BQ9NQT8 1826 aa33.86■■■■□ 3.01
PDCD4-205ENST00000467574 A0A087WZG4 1122 aa33.86■■■■□ 3.01
PDCD4-205ENST00000467574 ZPR1O75312 459 aa33.86■■■■□ 3.01
PDCD4-205ENST00000467574 MMP10P09238 476 aa33.86■■■■□ 3.01
PDCD4-205ENST00000467574 ZNF330Q9Y3S2 320 aaPredicted RBP33.85■■■■□ 3.01
PDCD4-205ENST00000467574 AFDNP55196 1824 aaKnown RBP33.83■■■■□ 3.01
PDCD4-205ENST00000467574 SYT17Q9BSW7 474 aa33.83■■■■□ 3.01
PDCD4-205ENST00000467574 IL16Q14005 1332 aa33.82■■■■□ 3.01
PDCD4-205ENST00000467574 TBC1D2BQ9UPU7 963 aa33.82■■■■□ 3
PDCD4-205ENST00000467574 SALL2Q9Y467 1007 aaPredicted RBP33.82■■■■□ 3
PDCD4-205ENST00000467574 NRXN2Q9P2S2 1712 aa33.82■■■■□ 3
PDCD4-205ENST00000467574 ERBB4Q15303 1308 aa33.81■■■■□ 3
PDCD4-205ENST00000467574 CAMTA2O94983 1202 aa33.81■■■■□ 3
PDCD4-205ENST00000467574 DDR1Q08345 913 aa33.8■■■■□ 3
PDCD4-205ENST00000467574 GOLGB1Q14789 3259 aaKnown RBP33.8■■■■□ 3
PDCD4-205ENST00000467574 HOXB7P09629 217 aa33.79■■■■□ 3
PDCD4-205ENST00000467574 DZIP3Q86Y13 1208 aaKnown RBP33.79■■■■□ 3
PDCD4-205ENST00000467574 NGEFQ8N5V2 710 aa33.79■■■■□ 3
PDCD4-205ENST00000467574 KIAA1551Q9HCM1 1747 aa33.79■■■■□ 3
PDCD4-205ENST00000467574 TM4SF1P30408 202 aa33.78■■■■□ 3
PDCD4-205ENST00000467574 PDIA6Q15084 440 aa33.78■■■■□ 3
PDCD4-205ENST00000467574 LRP10Q7Z4F1 713 aa33.78■■■■□ 3
PDCD4-205ENST00000467574 EIF2S2P20042 333 aaKnown RBP33.77■■■■□ 3
PDCD4-205ENST00000467574 WDR63Q8IWG1 891 aa33.77■■■■□ 3
PDCD4-205ENST00000467574 TSR2Q969E8 191 aaKnown RBP33.77■■■■□ 3
PDCD4-205ENST00000467574 C10orf71Q711Q0 1435 aa33.77■■■■□ 3
PDCD4-205ENST00000467574 ZNF521Q96K83 1311 aa33.77■■■■□ 3
PDCD4-205ENST00000467574 NFIXQ14938 502 aa33.76■■■□□ 2.99
PDCD4-205ENST00000467574 DUSP27Q5VZP5 1158 aa33.76■■■□□ 2.99
PDCD4-205ENST00000467574 NUP98P52948 1817 aa33.76■■■□□ 2.99
PDCD4-205ENST00000467574 POLRMTO00411 1230 aaKnown RBP33.75■■■□□ 2.99
PDCD4-205ENST00000467574 PROSER3Q2NL68 480 aa33.75■■■□□ 2.99
PDCD4-205ENST00000467574 NPM2Q86SE8 214 aaKnown RBP33.75■■■□□ 2.99
PDCD4-205ENST00000467574 KLHL34Q8N239 644 aa33.75■■■□□ 2.99
PDCD4-205ENST00000467574 NLGN2Q8NFZ4 835 aa33.74■■■□□ 2.99
PDCD4-205ENST00000467574 MYL6BP14649 208 aa33.73■■■□□ 2.99
PDCD4-205ENST00000467574 C8orf58Q8NAV2 365 aa33.73■■■□□ 2.99
PDCD4-205ENST00000467574 NECTIN2Q92692 538 aa33.73■■■□□ 2.99
PDCD4-205ENST00000467574 CD2APQ9Y5K6 639 aa33.73■■■□□ 2.99
PDCD4-205ENST00000467574 PARP3Q9Y6F1 533 aa33.73■■■□□ 2.99
PDCD4-205ENST00000467574 ANXA1P04083 346 aa33.71■■■□□ 2.99
PDCD4-205ENST00000467574 HDGFL1Q5TGJ6 251 aa33.71■■■□□ 2.99
PDCD4-205ENST00000467574 TBC1D9BQ66K14 1250 aa33.71■■■□□ 2.99
PDCD4-205ENST00000467574 SPINK5Q9NQ38 1064 aaPredicted RBP33.71■■■□□ 2.99
PDCD4-205ENST00000467574 FANCIQ9NVI1 1328 aa33.71■■■□□ 2.99
PDCD4-205ENST00000467574 UTRNP46939 3433 aa33.7■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms