RNA–Protein interactions for RNA: ENST00000464586.1

PLD3-208, Transcript of phospholipase D family member 3, humanhuman

TSL 1 (best)

Gene PLD3, Length 253 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-208ENST00000464586 EIF4A1P60842 406 aaKnown RBP10.77□□□□□ -0.69
PLD3-208ENST00000464586 GNAI1P63096 354 aa10.77□□□□□ -0.69
PLD3-208ENST00000464586 TRAPPC3LQ5T215 181 aa10.77□□□□□ -0.69
PLD3-208ENST00000464586 COL23A1Q86Y22 540 aaPredicted RBP10.77□□□□□ -0.69
PLD3-208ENST00000464586 CFAP44Q96MT7 982 aa10.77□□□□□ -0.69
PLD3-208ENST00000464586 CACNA1FO60840 1977 aa10.77□□□□□ -0.69
PLD3-208ENST00000464586 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.76□□□□□ -0.69
PLD3-208ENST00000464586 PHF14O94880 888 aa10.76□□□□□ -0.69
PLD3-208ENST00000464586 INTS5Q6P9B9 1019 aaKnown RBP10.76□□□□□ -0.69
PLD3-208ENST00000464586 WWC1Q8IX03 1113 aa10.76□□□□□ -0.69
PLD3-208ENST00000464586 PDGFDQ9GZP0 370 aaPredicted RBP10.76□□□□□ -0.69
PLD3-208ENST00000464586 MTFR1LQ9H019 292 aa10.76□□□□□ -0.69
PLD3-208ENST00000464586 SPON1Q9HCB6 807 aa10.76□□□□□ -0.69
PLD3-208ENST00000464586 IFT57Q9NWB7 429 aa10.76□□□□□ -0.69
PLD3-208ENST00000464586 GIGYF1O75420 1035 aaPredicted RBP10.75□□□□□ -0.69
PLD3-208ENST00000464586 ZBTB7AO95365 584 aa10.75□□□□□ -0.69
PLD3-208ENST00000464586 NPM2Q86SE8 214 aaKnown RBP10.75□□□□□ -0.69
PLD3-208ENST00000464586 WDR63Q8IWG1 891 aa10.75□□□□□ -0.69
PLD3-208ENST00000464586 SALL2Q9Y467 1007 aaPredicted RBP10.75□□□□□ -0.69
PLD3-208ENST00000464586 USP16Q9Y5T5 823 aa10.75□□□□□ -0.69
PLD3-208ENST00000464586 SENP3-EIF4A1A0A087X0R7 540 aa10.74□□□□□ -0.69
PLD3-208ENST00000464586 ZNF853P0CG23 659 aa10.74□□□□□ -0.69
PLD3-208ENST00000464586 CANXP27824 592 aaKnown RBP10.74□□□□□ -0.69
PLD3-208ENST00000464586 RFC4P35249 363 aa10.74□□□□□ -0.69
PLD3-208ENST00000464586 ATF5Q9Y2D1 282 aaPredicted RBP10.74□□□□□ -0.69
PLD3-208ENST00000464586 ZBTB1Q9Y2K1 713 aa10.74□□□□□ -0.69
PLD3-208ENST00000464586 IL16Q14005 1332 aa10.74□□□□□ -0.69
PLD3-208ENST00000464586 BCORQ6W2J9 1755 aa10.73□□□□□ -0.69
PLD3-208ENST00000464586 NUP98P52948 1817 aa10.73□□□□□ -0.69
PLD3-208ENST00000464586 A0A087WZG4 1122 aa10.73□□□□□ -0.69
PLD3-208ENST00000464586 PRAMEF22A3QJZ6 481 aa10.73□□□□□ -0.69
PLD3-208ENST00000464586 A1BGP04217 495 aa10.73□□□□□ -0.69
PLD3-208ENST00000464586 IL6STP40189 918 aaPredicted RBP10.73□□□□□ -0.69
PLD3-208ENST00000464586 AMIGO3Q86WK7 504 aa10.73□□□□□ -0.69
PLD3-208ENST00000464586 ARHGEF1Q92888 912 aaKnown RBP10.73□□□□□ -0.69
PLD3-208ENST00000464586 MBIPQ9NS73 344 aa10.73□□□□□ -0.69
PLD3-208ENST00000464586 SOS1Q07889 1333 aaPredicted RBP10.73□□□□□ -0.69
PLD3-208ENST00000464586 COL15A1P39059 1388 aa10.73□□□□□ -0.69
PLD3-208ENST00000464586 POLD1P28340 1107 aa10.72□□□□□ -0.69
PLD3-208ENST00000464586 EIF5P55010 431 aaKnown RBP10.72□□□□□ -0.69
PLD3-208ENST00000464586 SMIM5Q71RC9 77 aa10.72□□□□□ -0.69
PLD3-208ENST00000464586 ERBB4Q15303 1308 aa10.72□□□□□ -0.69
PLD3-208ENST00000464586 ZPR1O75312 459 aa10.71□□□□□ -0.69
PLD3-208ENST00000464586 HOXB7P09629 217 aa10.71□□□□□ -0.69
PLD3-208ENST00000464586 SCN7AQ01118 1682 aa10.71□□□□□ -0.69
PLD3-208ENST00000464586 NLGN1Q8N2Q7 840 aa10.71□□□□□ -0.69
PLD3-208ENST00000464586 CHMP4AQ9BY43 222 aa10.71□□□□□ -0.69
PLD3-208ENST00000464586 PPP1R1BQ9UD71 204 aaPredicted RBP10.71□□□□□ -0.69
PLD3-208ENST00000464586 ZNF330Q9Y3S2 320 aaPredicted RBP10.71□□□□□ -0.69
PLD3-208ENST00000464586 AFDNP55196 1824 aaKnown RBP10.7□□□□□ -0.7
PLD3-208ENST00000464586 USP42Q9H9J4 1324 aaKnown RBP10.7□□□□□ -0.7
PLD3-208ENST00000464586 EIF2S2P20042 333 aaKnown RBP10.7□□□□□ -0.7
PLD3-208ENST00000464586 NARFQ9UHQ1 456 aa10.7□□□□□ -0.7
PLD3-208ENST00000464586 NBPF26B4DH59 902 aa10.69□□□□□ -0.7
PLD3-208ENST00000464586 GYS1P13807 737 aa10.69□□□□□ -0.7
PLD3-208ENST00000464586 PTGER2P43116 358 aa10.69□□□□□ -0.7
PLD3-208ENST00000464586 DUSP27Q5VZP5 1158 aa10.69□□□□□ -0.7
PLD3-208ENST00000464586 MSL1Q68DK7 614 aa10.69□□□□□ -0.7
PLD3-208ENST00000464586 NBPF10Q6P3W6 841 aaKnown RBP10.69□□□□□ -0.7
PLD3-208ENST00000464586 NBPF15Q8N660 670 aa10.69□□□□□ -0.7
PLD3-208ENST00000464586 TSR2Q969E8 191 aaKnown RBP10.69□□□□□ -0.7
PLD3-208ENST00000464586 ARXQ96QS3 562 aa10.69□□□□□ -0.7
PLD3-208ENST00000464586 MYH16Q9H6N6 1097 aa10.69□□□□□ -0.7
PLD3-208ENST00000464586 SRP68Q9UHB9 627 aaKnown RBP10.69□□□□□ -0.7
PLD3-208ENST00000464586 ANKRD36CQ5JPF3 1778 aa10.68□□□□□ -0.7
PLD3-208ENST00000464586 ZNF521Q96K83 1311 aa10.68□□□□□ -0.7
PLD3-208ENST00000464586 PIP4K2AP48426 406 aaPredicted RBP10.68□□□□□ -0.7
PLD3-208ENST00000464586 GOLGA2Q08379 1002 aa10.68□□□□□ -0.7
PLD3-208ENST00000464586 KRT24Q2M2I5 525 aa10.68□□□□□ -0.7
PLD3-208ENST00000464586 HDGFL1Q5TGJ6 251 aa10.68□□□□□ -0.7
PLD3-208ENST00000464586 USPL1Q5W0Q7 1092 aa10.68□□□□□ -0.7
PLD3-208ENST00000464586 DZIP3Q86Y13 1208 aaKnown RBP10.68□□□□□ -0.7
PLD3-208ENST00000464586 SGIP1Q9BQI5 828 aa10.68□□□□□ -0.7
PLD3-208ENST00000464586 KIF13BQ9NQT8 1826 aa10.68□□□□□ -0.7
PLD3-208ENST00000464586 ELL2O00472 640 aaPredicted RBP10.67□□□□□ -0.7
PLD3-208ENST00000464586 MYL6BP14649 208 aa10.67□□□□□ -0.7
PLD3-208ENST00000464586 C8orf58Q8NAV2 365 aa10.67□□□□□ -0.7
PLD3-208ENST00000464586 NECTIN2Q92692 538 aa10.67□□□□□ -0.7
PLD3-208ENST00000464586 DDX21Q9NR30 783 aaKnown RBP eCLIP10.67□□□□□ -0.7
PLD3-208ENST00000464586 TBC1D2BQ9UPU7 963 aa10.67□□□□□ -0.7
PLD3-208ENST00000464586 FANCIQ9NVI1 1328 aa10.66□□□□□ -0.7
PLD3-208ENST00000464586 E9PSI1 815 aa10.66□□□□□ -0.7
PLD3-208ENST00000464586 RGL2O15211 777 aa10.66□□□□□ -0.7
PLD3-208ENST00000464586 FKBP8Q14318 412 aa10.66□□□□□ -0.7
PLD3-208ENST00000464586 KIF6Q6ZMV9 814 aa10.66□□□□□ -0.7
PLD3-208ENST00000464586 DBF4Q9UBU7 674 aaPredicted RBP10.66□□□□□ -0.7
PLD3-208ENST00000464586 ZNF652Q9Y2D9 606 aa10.66□□□□□ -0.7
PLD3-208ENST00000464586 PARP3Q9Y6F1 533 aa10.66□□□□□ -0.7
PLD3-208ENST00000464586 NRXN2Q9P2S2 1712 aa10.66□□□□□ -0.7
PLD3-208ENST00000464586 CAMTA2O94983 1202 aa10.65□□□□□ -0.7
PLD3-208ENST00000464586 MMP10P09238 476 aa10.65□□□□□ -0.7
PLD3-208ENST00000464586 HNRNPUQ00839 825 aaKnown RBP eCLIP10.65□□□□□ -0.7
PLD3-208ENST00000464586 PDIA6Q15084 440 aa10.65□□□□□ -0.7
PLD3-208ENST00000464586 TWISTNBQ3B726 338 aaPredicted RBP10.65□□□□□ -0.7
PLD3-208ENST00000464586 CCDC30Q5VVM6 783 aa10.65□□□□□ -0.7
PLD3-208ENST00000464586 CLEC4GQ6UXB4 293 aa10.65□□□□□ -0.7
PLD3-208ENST00000464586 BCL2L12Q9HB09 334 aa10.65□□□□□ -0.7
PLD3-208ENST00000464586 HYPKQ9NX55 129 aa10.65□□□□□ -0.7
PLD3-208ENST00000464586 ARFGEF2Q9Y6D5 1785 aa10.65□□□□□ -0.71
PLD3-208ENST00000464586 MAP3K15Q6ZN16 1313 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms