RNA–Protein interactions for RNA: ENST00000463513.5

GPATCH4-204, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-204ENST00000463513 NGEFQ8N5V2 710 aa13.04□□□□□ -0.32
GPATCH4-204ENST00000463513 IFT57Q9NWB7 429 aa13.04□□□□□ -0.32
GPATCH4-204ENST00000463513 ZNF330Q9Y3S2 320 aaPredicted RBP13.04□□□□□ -0.32
GPATCH4-204ENST00000463513 ZBTB7AO95365 584 aa13.03□□□□□ -0.32
GPATCH4-204ENST00000463513 CYP19A1P11511 503 aaPredicted RBP13.03□□□□□ -0.32
GPATCH4-204ENST00000463513 CFAP44Q96MT7 982 aa13.03□□□□□ -0.32
GPATCH4-204ENST00000463513 ADRA2BP18089 450 aa13.02□□□□□ -0.33
GPATCH4-204ENST00000463513 CANXP27824 592 aaKnown RBP13.02□□□□□ -0.33
GPATCH4-204ENST00000463513 EIF4A1P60842 406 aaKnown RBP13.02□□□□□ -0.33
GPATCH4-204ENST00000463513 NCBP3Q53F19 620 aaKnown RBP13.02□□□□□ -0.33
GPATCH4-204ENST00000463513 ZBTB1Q9Y2K1 713 aa13.02□□□□□ -0.33
GPATCH4-204ENST00000463513 COL15A1P39059 1388 aa13.02□□□□□ -0.33
GPATCH4-204ENST00000463513 SCN7AQ01118 1682 aa13.02□□□□□ -0.33
GPATCH4-204ENST00000463513 CHL1O00533 1208 aa13.01□□□□□ -0.33
GPATCH4-204ENST00000463513 RPS6KA4O75676 772 aa13.01□□□□□ -0.33
GPATCH4-204ENST00000463513 RFC4P35249 363 aa13.01□□□□□ -0.33
GPATCH4-204ENST00000463513 TRAPPC3LQ5T215 181 aa13.01□□□□□ -0.33
GPATCH4-204ENST00000463513 COL23A1Q86Y22 540 aaPredicted RBP13.01□□□□□ -0.33
GPATCH4-204ENST00000463513 PDGFDQ9GZP0 370 aaPredicted RBP13.01□□□□□ -0.33
GPATCH4-204ENST00000463513 MTFR1LQ9H019 292 aa13.01□□□□□ -0.33
GPATCH4-204ENST00000463513 SPON1Q9HCB6 807 aa13.01□□□□□ -0.33
GPATCH4-204ENST00000463513 MBIPQ9NS73 344 aa13.01□□□□□ -0.33
GPATCH4-204ENST00000463513 BCORQ6W2J9 1755 aa13□□□□□ -0.33
GPATCH4-204ENST00000463513 SOS1Q07889 1333 aaPredicted RBP13□□□□□ -0.33
GPATCH4-204ENST00000463513 IL16Q14005 1332 aa13□□□□□ -0.33
GPATCH4-204ENST00000463513 PRAMEF22A3QJZ6 481 aa13□□□□□ -0.33
GPATCH4-204ENST00000463513 GIGYF1O75420 1035 aaPredicted RBP13□□□□□ -0.33
GPATCH4-204ENST00000463513 INTS5Q6P9B9 1019 aaKnown RBP13□□□□□ -0.33
GPATCH4-204ENST00000463513 SLC16A10Q8TF71 515 aa13□□□□□ -0.33
GPATCH4-204ENST00000463513 ARXQ96QS3 562 aa13□□□□□ -0.33
GPATCH4-204ENST00000463513 PPP1R1BQ9UD71 204 aaPredicted RBP13□□□□□ -0.33
GPATCH4-204ENST00000463513 POLD1P28340 1107 aa12.99□□□□□ -0.33
GPATCH4-204ENST00000463513 MSL1Q68DK7 614 aa12.99□□□□□ -0.33
GPATCH4-204ENST00000463513 SMIM5Q71RC9 77 aa12.99□□□□□ -0.33
GPATCH4-204ENST00000463513 AMIGO3Q86WK7 504 aa12.99□□□□□ -0.33
GPATCH4-204ENST00000463513 WDR63Q8IWG1 891 aa12.99□□□□□ -0.33
GPATCH4-204ENST00000463513 TSR2Q969E8 191 aaKnown RBP12.99□□□□□ -0.33
GPATCH4-204ENST00000463513 ATF5Q9Y2D1 282 aaPredicted RBP12.99□□□□□ -0.33
GPATCH4-204ENST00000463513 A0A087WZG4 1122 aa12.98□□□□□ -0.33
GPATCH4-204ENST00000463513 ZPR1O75312 459 aa12.98□□□□□ -0.33
GPATCH4-204ENST00000463513 A1BGP04217 495 aa12.98□□□□□ -0.33
GPATCH4-204ENST00000463513 EIF2S2P20042 333 aaKnown RBP12.98□□□□□ -0.33
GPATCH4-204ENST00000463513 MYH16Q9H6N6 1097 aa12.98□□□□□ -0.33
GPATCH4-204ENST00000463513 USP16Q9Y5T5 823 aa12.98□□□□□ -0.33
GPATCH4-204ENST00000463513 COL24A1Q17RW2 1714 aa12.98□□□□□ -0.33
GPATCH4-204ENST00000463513 FANCIQ9NVI1 1328 aa12.97□□□□□ -0.33
GPATCH4-204ENST00000463513 ZNF853P0CG23 659 aa12.97□□□□□ -0.33
GPATCH4-204ENST00000463513 IL6STP40189 918 aaPredicted RBP12.97□□□□□ -0.33
GPATCH4-204ENST00000463513 PIP4K2AP48426 406 aaPredicted RBP12.97□□□□□ -0.33
GPATCH4-204ENST00000463513 HNRNPUQ00839 825 aaKnown RBP eCLIP12.97□□□□□ -0.33
GPATCH4-204ENST00000463513 KRT24Q2M2I5 525 aa12.97□□□□□ -0.33
GPATCH4-204ENST00000463513 NECTIN2Q92692 538 aa12.97□□□□□ -0.33
GPATCH4-204ENST00000463513 ARHGEF1Q92888 912 aaKnown RBP12.97□□□□□ -0.33
GPATCH4-204ENST00000463513 CACNA1FO60840 1977 aa12.96□□□□□ -0.33
GPATCH4-204ENST00000463513 ERBB4Q15303 1308 aa12.96□□□□□ -0.33
GPATCH4-204ENST00000463513 HOXB7P09629 217 aa12.96□□□□□ -0.33
GPATCH4-204ENST00000463513 MYL6BP14649 208 aa12.96□□□□□ -0.33
GPATCH4-204ENST00000463513 GOLGA2Q08379 1002 aa12.96□□□□□ -0.33
GPATCH4-204ENST00000463513 HDGFL1Q5TGJ6 251 aa12.96□□□□□ -0.33
GPATCH4-204ENST00000463513 DUSP27Q5VZP5 1158 aa12.96□□□□□ -0.33
GPATCH4-204ENST00000463513 USP42Q9H9J4 1324 aaKnown RBP12.95□□□□□ -0.34
GPATCH4-204ENST00000463513 ELL2O00472 640 aaPredicted RBP12.95□□□□□ -0.34
GPATCH4-204ENST00000463513 CHMP4AQ9BY43 222 aa12.95□□□□□ -0.34
GPATCH4-204ENST00000463513 SRP68Q9UHB9 627 aaKnown RBP12.95□□□□□ -0.34
GPATCH4-204ENST00000463513 EIF5P55010 431 aaKnown RBP12.94□□□□□ -0.34
GPATCH4-204ENST00000463513 KIF6Q6ZMV9 814 aa12.94□□□□□ -0.34
GPATCH4-204ENST00000463513 DZIP3Q86Y13 1208 aaKnown RBP12.94□□□□□ -0.34
GPATCH4-204ENST00000463513 KLHL34Q8N239 644 aa12.94□□□□□ -0.34
GPATCH4-204ENST00000463513 NUP98P52948 1817 aa12.94□□□□□ -0.34
GPATCH4-204ENST00000463513 E9PSI1 815 aa12.93□□□□□ -0.34
GPATCH4-204ENST00000463513 USPL1Q5W0Q7 1092 aa12.93□□□□□ -0.34
GPATCH4-204ENST00000463513 NLGN1Q8N2Q7 840 aa12.93□□□□□ -0.34
GPATCH4-204ENST00000463513 NARFQ9UHQ1 456 aa12.93□□□□□ -0.34
GPATCH4-204ENST00000463513 TBC1D2BQ9UPU7 963 aa12.93□□□□□ -0.34
GPATCH4-204ENST00000463513 ZNF652Q9Y2D9 606 aa12.93□□□□□ -0.34
GPATCH4-204ENST00000463513 ANKRD36CQ5JPF3 1778 aa12.93□□□□□ -0.34
GPATCH4-204ENST00000463513 ZNF521Q96K83 1311 aa12.92□□□□□ -0.34
GPATCH4-204ENST00000463513 NBPF26B4DH59 902 aa12.92□□□□□ -0.34
GPATCH4-204ENST00000463513 GYS1P13807 737 aa12.92□□□□□ -0.34
GPATCH4-204ENST00000463513 TWISTNBQ3B726 338 aaPredicted RBP12.92□□□□□ -0.34
GPATCH4-204ENST00000463513 NBPF10Q6P3W6 841 aaKnown RBP12.92□□□□□ -0.34
GPATCH4-204ENST00000463513 NBPF15Q8N660 670 aa12.92□□□□□ -0.34
GPATCH4-204ENST00000463513 C8orf58Q8NAV2 365 aa12.92□□□□□ -0.34
GPATCH4-204ENST00000463513 STK31Q9BXU1 1019 aa12.92□□□□□ -0.34
GPATCH4-204ENST00000463513 CHPF2Q9P2E5 772 aa12.92□□□□□ -0.34
GPATCH4-204ENST00000463513 AFDNP55196 1824 aaKnown RBP12.92□□□□□ -0.34
GPATCH4-204ENST00000463513 MMP10P09238 476 aa12.91□□□□□ -0.34
GPATCH4-204ENST00000463513 CCDC30Q5VVM6 783 aa12.91□□□□□ -0.34
GPATCH4-204ENST00000463513 DBF4Q9UBU7 674 aaPredicted RBP12.91□□□□□ -0.34
GPATCH4-204ENST00000463513 PARP3Q9Y6F1 533 aa12.91□□□□□ -0.34
GPATCH4-204ENST00000463513 ARFGEF2Q9Y6D5 1785 aa12.91□□□□□ -0.34
GPATCH4-204ENST00000463513 NPHP1O15259 732 aa12.9□□□□□ -0.34
GPATCH4-204ENST00000463513 ANXA1P04083 346 aa12.9□□□□□ -0.34
GPATCH4-204ENST00000463513 PTGER2P43116 358 aa12.9□□□□□ -0.34
GPATCH4-204ENST00000463513 EXOSC9Q06265 439 aaKnown RBP12.9□□□□□ -0.34
GPATCH4-204ENST00000463513 FKBP8Q14318 412 aa12.9□□□□□ -0.34
GPATCH4-204ENST00000463513 DDX21Q9NR30 783 aaKnown RBP eCLIP12.9□□□□□ -0.34
GPATCH4-204ENST00000463513 AIMP1Q12904 312 aaKnown RBP12.89□□□□□ -0.35
GPATCH4-204ENST00000463513 PROSER3Q2NL68 480 aa12.89□□□□□ -0.35
GPATCH4-204ENST00000463513 BICDL1Q6ZP65 573 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms