RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 PRAMEF22A3QJZ6 481 aa27.02■■□□□ 1.92
RPUSD3-210ENST00000460909 EIF4A1P60842 406 aaKnown RBP27.02■■□□□ 1.92
RPUSD3-210ENST00000460909 CHL1O00533 1208 aa27.01■■□□□ 1.91
RPUSD3-210ENST00000460909 STARD3NLO95772 234 aa27.01■■□□□ 1.91
RPUSD3-210ENST00000460909 SNRPA1P09661 255 aaKnown RBP27.01■■□□□ 1.91
RPUSD3-210ENST00000460909 TSPYL4Q9UJ04 414 aa27.01■■□□□ 1.91
RPUSD3-210ENST00000460909 C4AP0C0L4 1744 aa27■■□□□ 1.91
RPUSD3-210ENST00000460909 SENP3-EIF4A1A0A087X0R7 540 aa27■■□□□ 1.91
RPUSD3-210ENST00000460909 MSH5O43196 834 aa27■■□□□ 1.91
RPUSD3-210ENST00000460909 ADRA2BP18089 450 aa27■■□□□ 1.91
RPUSD3-210ENST00000460909 NCBP3Q53F19 620 aaKnown RBP27■■□□□ 1.91
RPUSD3-210ENST00000460909 TRAPPC3LQ5T215 181 aa27■■□□□ 1.91
RPUSD3-210ENST00000460909 ZBTB1Q9Y2K1 713 aa27■■□□□ 1.91
RPUSD3-210ENST00000460909 USP16Q9Y5T5 823 aa27■■□□□ 1.91
RPUSD3-210ENST00000460909 CCDC27Q2M243 656 aa26.99■■□□□ 1.91
RPUSD3-210ENST00000460909 ARHGEF1Q92888 912 aaKnown RBP26.99■■□□□ 1.91
RPUSD3-210ENST00000460909 SOS1Q07889 1333 aaPredicted RBP26.98■■□□□ 1.91
RPUSD3-210ENST00000460909 MIER1Q8N108 512 aa26.98■■□□□ 1.91
RPUSD3-210ENST00000460909 GIGYF1O75420 1035 aaPredicted RBP26.97■■□□□ 1.91
RPUSD3-210ENST00000460909 ZNF853P0CG23 659 aa26.96■■□□□ 1.91
RPUSD3-210ENST00000460909 CFAP44Q96MT7 982 aa26.96■■□□□ 1.91
RPUSD3-210ENST00000460909 LAMB4A4D0S4 1761 aa26.96■■□□□ 1.91
RPUSD3-210ENST00000460909 A1BGP04217 495 aa26.95■■□□□ 1.9
RPUSD3-210ENST00000460909 WWC1Q8IX03 1113 aa26.95■■□□□ 1.9
RPUSD3-210ENST00000460909 LAS1LQ9Y4W2 734 aaKnown RBP26.94■■□□□ 1.9
RPUSD3-210ENST00000460909 CANXP27824 592 aaKnown RBP26.93■■□□□ 1.9
RPUSD3-210ENST00000460909 EIF5P55010 431 aaKnown RBP26.93■■□□□ 1.9
RPUSD3-210ENST00000460909 RFC4P35249 363 aa26.92■■□□□ 1.9
RPUSD3-210ENST00000460909 CALD1Q05682 793 aaKnown RBP26.92■■□□□ 1.9
RPUSD3-210ENST00000460909 MSL1Q68DK7 614 aa26.92■■□□□ 1.9
RPUSD3-210ENST00000460909 IFT57Q9NWB7 429 aa26.92■■□□□ 1.9
RPUSD3-210ENST00000460909 COL15A1P39059 1388 aa26.92■■□□□ 1.9
RPUSD3-210ENST00000460909 USP42Q9H9J4 1324 aaKnown RBP26.9■■□□□ 1.9
RPUSD3-210ENST00000460909 IL6STP40189 918 aaPredicted RBP26.9■■□□□ 1.9
RPUSD3-210ENST00000460909 MBIPQ9NS73 344 aa26.9■■□□□ 1.9
RPUSD3-210ENST00000460909 NBPF26B4DH59 902 aa26.89■■□□□ 1.9
RPUSD3-210ENST00000460909 GYS1P13807 737 aa26.89■■□□□ 1.9
RPUSD3-210ENST00000460909 GNAI1P63096 354 aa26.89■■□□□ 1.9
RPUSD3-210ENST00000460909 NBPF10Q6P3W6 841 aaKnown RBP26.89■■□□□ 1.9
RPUSD3-210ENST00000460909 NBPF15Q8N660 670 aa26.89■■□□□ 1.9
RPUSD3-210ENST00000460909 SRP68Q9UHB9 627 aaKnown RBP26.89■■□□□ 1.9
RPUSD3-210ENST00000460909 PIP4K2AP48426 406 aaPredicted RBP26.88■■□□□ 1.89
RPUSD3-210ENST00000460909 KRT24Q2M2I5 525 aa26.88■■□□□ 1.89
RPUSD3-210ENST00000460909 POLD1P28340 1107 aa26.87■■□□□ 1.89
RPUSD3-210ENST00000460909 SALL2Q9Y467 1007 aaPredicted RBP26.87■■□□□ 1.89
RPUSD3-210ENST00000460909 NGEFQ8N5V2 710 aa26.86■■□□□ 1.89
RPUSD3-210ENST00000460909 ARXQ96QS3 562 aa26.86■■□□□ 1.89
RPUSD3-210ENST00000460909 PPP1R1BQ9UD71 204 aaPredicted RBP26.86■■□□□ 1.89
RPUSD3-210ENST00000460909 NARFQ9UHQ1 456 aa26.86■■□□□ 1.89
RPUSD3-210ENST00000460909 NLGN1Q8N2Q7 840 aa26.85■■□□□ 1.89
RPUSD3-210ENST00000460909 IL16Q14005 1332 aa26.85■■□□□ 1.89
RPUSD3-210ENST00000460909 A0A087WZG4 1122 aa26.83■■□□□ 1.89
RPUSD3-210ENST00000460909 USPL1Q5W0Q7 1092 aa26.83■■□□□ 1.89
RPUSD3-210ENST00000460909 WDR63Q8IWG1 891 aa26.83■■□□□ 1.89
RPUSD3-210ENST00000460909 BCL2L12Q9HB09 334 aa26.83■■□□□ 1.89
RPUSD3-210ENST00000460909 ZPR1O75312 459 aa26.82■■□□□ 1.88
RPUSD3-210ENST00000460909 FKBP8Q14318 412 aa26.82■■□□□ 1.88
RPUSD3-210ENST00000460909 TBC1D2BQ9UPU7 963 aa26.81■■□□□ 1.88
RPUSD3-210ENST00000460909 ZNF330Q9Y3S2 320 aaPredicted RBP26.81■■□□□ 1.88
RPUSD3-210ENST00000460909 SCN7AQ01118 1682 aa26.81■■□□□ 1.88
RPUSD3-210ENST00000460909 HOXB7P09629 217 aa26.8■■□□□ 1.88
RPUSD3-210ENST00000460909 ERBB4Q15303 1308 aa26.8■■□□□ 1.88
RPUSD3-210ENST00000460909 ZNF521Q96K83 1311 aa26.8■■□□□ 1.88
RPUSD3-210ENST00000460909 MMP10P09238 476 aa26.79■■□□□ 1.88
RPUSD3-210ENST00000460909 EIF2S2P20042 333 aaKnown RBP26.79■■□□□ 1.88
RPUSD3-210ENST00000460909 PDIA6Q15084 440 aa26.79■■□□□ 1.88
RPUSD3-210ENST00000460909 DUSP27Q5VZP5 1158 aa26.79■■□□□ 1.88
RPUSD3-210ENST00000460909 TSR2Q969E8 191 aaKnown RBP26.79■■□□□ 1.88
RPUSD3-210ENST00000460909 FHDC1Q9C0D6 1143 aaPredicted RBP26.79■■□□□ 1.88
RPUSD3-210ENST00000460909 BCORQ6W2J9 1755 aa26.79■■□□□ 1.88
RPUSD3-210ENST00000460909 LRP10Q7Z4F1 713 aa26.78■■□□□ 1.88
RPUSD3-210ENST00000460909 CAMTA2O94983 1202 aa26.77■■□□□ 1.88
RPUSD3-210ENST00000460909 TM4SF1P30408 202 aa26.77■■□□□ 1.88
RPUSD3-210ENST00000460909 DZIP3Q86Y13 1208 aaKnown RBP26.77■■□□□ 1.88
RPUSD3-210ENST00000460909 C8orf58Q8NAV2 365 aa26.77■■□□□ 1.88
RPUSD3-210ENST00000460909 SPINK5Q9NQ38 1064 aaPredicted RBP26.77■■□□□ 1.88
RPUSD3-210ENST00000460909 NPM2Q86SE8 214 aaKnown RBP26.76■■□□□ 1.87
RPUSD3-210ENST00000460909 SYT17Q9BSW7 474 aa26.76■■□□□ 1.87
RPUSD3-210ENST00000460909 PROSER3Q2NL68 480 aa26.75■■□□□ 1.87
RPUSD3-210ENST00000460909 MYL6BP14649 208 aa26.74■■□□□ 1.87
RPUSD3-210ENST00000460909 DDR1Q08345 913 aa26.74■■□□□ 1.87
RPUSD3-210ENST00000460909 NECTIN2Q92692 538 aa26.74■■□□□ 1.87
RPUSD3-210ENST00000460909 FANCIQ9NVI1 1328 aa26.73■■□□□ 1.87
RPUSD3-210ENST00000460909 ELL2O00472 640 aaPredicted RBP26.73■■□□□ 1.87
RPUSD3-210ENST00000460909 NFIXQ14938 502 aa26.73■■□□□ 1.87
RPUSD3-210ENST00000460909 HDGFL1Q5TGJ6 251 aa26.73■■□□□ 1.87
RPUSD3-210ENST00000460909 TSPYL6Q8N831 410 aa26.73■■□□□ 1.87
RPUSD3-210ENST00000460909 ANXA1P04083 346 aa26.72■■□□□ 1.87
RPUSD3-210ENST00000460909 POLRMTO00411 1230 aaKnown RBP26.71■■□□□ 1.87
RPUSD3-210ENST00000460909 TTLL7Q6ZT98 887 aa26.71■■□□□ 1.87
RPUSD3-210ENST00000460909 DDX21Q9NR30 783 aaKnown RBP eCLIP26.71■■□□□ 1.87
RPUSD3-210ENST00000460909 PARP3Q9Y6F1 533 aa26.71■■□□□ 1.87
RPUSD3-210ENST00000460909 RGL2O15211 777 aa26.7■■□□□ 1.86
RPUSD3-210ENST00000460909 TBC1D9BQ66K14 1250 aa26.7■■□□□ 1.86
RPUSD3-210ENST00000460909 CHPF2Q9P2E5 772 aa26.7■■□□□ 1.86
RPUSD3-210ENST00000460909 CD2APQ9Y5K6 639 aa26.7■■□□□ 1.86
RPUSD3-210ENST00000460909 KIF13BQ9NQT8 1826 aa26.69■■□□□ 1.86
RPUSD3-210ENST00000460909 CLEC4GQ6UXB4 293 aa26.69■■□□□ 1.86
RPUSD3-210ENST00000460909 NRXN2Q9P2S2 1712 aa26.69■■□□□ 1.86
RPUSD3-210ENST00000460909 AFDNP55196 1824 aaKnown RBP26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms